RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 ALDH1L1O75891 902 aa21.88■■□□□ 1.09
SCARF1-202ENST00000348987 CCZ1BP86790 482 aa21.88■■□□□ 1.09
SCARF1-202ENST00000348987 CCZ1P86791 482 aaPredicted RBP21.88■■□□□ 1.09
SCARF1-202ENST00000348987 IQCB1Q15051 598 aa21.88■■□□□ 1.09
SCARF1-202ENST00000348987 CCAR2Q8N163 923 aaKnown RBP21.88■■□□□ 1.09
SCARF1-202ENST00000348987 PGBD1Q96JS3 809 aa21.88■■□□□ 1.09
SCARF1-202ENST00000348987 GRM8O00222 908 aa21.88■■□□□ 1.09
SCARF1-202ENST00000348987 FAM193AP78312 1265 aa21.88■■□□□ 1.09
SCARF1-202ENST00000348987 PDIA6Q15084 440 aa21.87■■□□□ 1.09
SCARF1-202ENST00000348987 C11orf57Q6ZUT1 292 aaPredicted RBP21.87■■□□□ 1.09
SCARF1-202ENST00000348987 MRFAP1L1Q96HT8 127 aa21.87■■□□□ 1.09
SCARF1-202ENST00000348987 TRIM34Q9BYJ4 488 aa21.87■■□□□ 1.09
SCARF1-202ENST00000348987 FHOD1Q9Y613 1164 aa21.87■■□□□ 1.09
SCARF1-202ENST00000348987 LRRN4CLQ8ND94 238 aa21.87■■□□□ 1.09
SCARF1-202ENST00000348987 SYTL4Q96C24 671 aaPredicted RBP21.87■■□□□ 1.09
SCARF1-202ENST00000348987 H2AFXP16104 143 aaPredicted RBP21.86■■□□□ 1.09
SCARF1-202ENST00000348987 LARP1Q6PKG0 1096 aaKnown RBP21.86■■□□□ 1.09
SCARF1-202ENST00000348987 LMO7Q8WWI1 1683 aa21.86■■□□□ 1.09
SCARF1-202ENST00000348987 IGKV5-2P06315 115 aa21.86■■□□□ 1.09
SCARF1-202ENST00000348987 SARM1Q6SZW1 724 aa21.86■■□□□ 1.09
SCARF1-202ENST00000348987 LINS1Q8NG48 757 aa21.86■■□□□ 1.09
SCARF1-202ENST00000348987 CHMP4AQ9BY43 222 aa21.86■■□□□ 1.09
SCARF1-202ENST00000348987 MYL6BP14649 208 aa21.85■■□□□ 1.09
SCARF1-202ENST00000348987 TM6SF1Q9BZW5 370 aa21.85■■□□□ 1.09
SCARF1-202ENST00000348987 TAF6LQ9Y6J9 622 aa21.85■■□□□ 1.09
SCARF1-202ENST00000348987 PDCP20941 246 aa21.85■■□□□ 1.09
SCARF1-202ENST00000348987 PIP4K2AP48426 406 aaPredicted RBP21.85■■□□□ 1.09
SCARF1-202ENST00000348987 CLCN6P51797 869 aa21.85■■□□□ 1.09
SCARF1-202ENST00000348987 CHRNA2Q15822 529 aa21.85■■□□□ 1.09
SCARF1-202ENST00000348987 CREBRFQ8IUR6 639 aa21.85■■□□□ 1.09
SCARF1-202ENST00000348987 TCEANC2Q96MN5 208 aa21.85■■□□□ 1.09
SCARF1-202ENST00000348987 NECTIN1Q15223 517 aa21.84■■□□□ 1.09
SCARF1-202ENST00000348987 A0A087WWV3 80 aa21.84■■□□□ 1.09
SCARF1-202ENST00000348987 RUFY2Q8WXA3 655 aa21.84■■□□□ 1.09
SCARF1-202ENST00000348987 BOLA2Q9H3K6 86 aa21.84■■□□□ 1.09
SCARF1-202ENST00000348987 NLRP2Q9NX02 1062 aa21.84■■□□□ 1.09
SCARF1-202ENST00000348987 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.84■■□□□ 1.09
SCARF1-202ENST00000348987 CRYBG1Q9Y4K1 1723 aa21.83■■□□□ 1.09
SCARF1-202ENST00000348987 HSPA2P54652 639 aa21.83■■□□□ 1.09
SCARF1-202ENST00000348987 NMIQ13287 307 aaPredicted RBP21.83■■□□□ 1.09
SCARF1-202ENST00000348987 EVI5LQ96CN4 794 aa21.83■■□□□ 1.09
SCARF1-202ENST00000348987 DDX21Q9NR30 783 aaKnown RBP eCLIP21.83■■□□□ 1.09
SCARF1-202ENST00000348987 EPHA10Q5JZY3 1008 aa21.83■■□□□ 1.08
SCARF1-202ENST00000348987 RNF20Q5VTR2 975 aa21.83■■□□□ 1.08
SCARF1-202ENST00000348987 RBM8AQ9Y5S9 174 aaKnown RBP21.83■■□□□ 1.08
SCARF1-202ENST00000348987 PNMA6AP0CW24 399 aaPredicted RBP21.82■■□□□ 1.08
SCARF1-202ENST00000348987 ZKSCAN1P17029 563 aaPredicted RBP21.82■■□□□ 1.08
SCARF1-202ENST00000348987 PLA2G4AP47712 749 aa21.82■■□□□ 1.08
SCARF1-202ENST00000348987 EDC3Q96F86 508 aaKnown RBP21.82■■□□□ 1.08
SCARF1-202ENST00000348987 A0A0D9SFI3 127 aa21.82■■□□□ 1.08
SCARF1-202ENST00000348987 BECN2A8MW95 431 aa21.82■■□□□ 1.08
SCARF1-202ENST00000348987 CAVIN2O95810 425 aa21.82■■□□□ 1.08
SCARF1-202ENST00000348987 RAD51AP2Q09MP3 1159 aa21.82■■□□□ 1.08
SCARF1-202ENST00000348987 ERC1Q8IUD2 1116 aa21.82■■□□□ 1.08
SCARF1-202ENST00000348987 GPATCH3Q96I76 525 aa21.82■■□□□ 1.08
SCARF1-202ENST00000348987 C19orf44Q9H6X5 657 aa21.82■■□□□ 1.08
SCARF1-202ENST00000348987 FEZ2Q9UHY8 353 aaPredicted RBP21.82■■□□□ 1.08
SCARF1-202ENST00000348987 PDIA4P13667 645 aaKnown RBP21.81■■□□□ 1.08
SCARF1-202ENST00000348987 G3BP1Q13283 466 aaKnown RBP eCLIP21.81■■□□□ 1.08
SCARF1-202ENST00000348987 SNW1Q13573 536 aaKnown RBP21.81■■□□□ 1.08
SCARF1-202ENST00000348987 STK3Q13188 491 aa21.81■■□□□ 1.08
SCARF1-202ENST00000348987 CREB3L3Q68CJ9 461 aa21.81■■□□□ 1.08
SCARF1-202ENST00000348987 RIC3Q7Z5B4 369 aa21.81■■□□□ 1.08
SCARF1-202ENST00000348987 NCAPD2Q15021 1401 aa21.81■■□□□ 1.08
SCARF1-202ENST00000348987 ZNF790Q6PG37 636 aa21.8■■□□□ 1.08
SCARF1-202ENST00000348987 SYT10Q6XYQ8 523 aa21.8■■□□□ 1.08
SCARF1-202ENST00000348987 NFATC2IPQ8NCF5 419 aa21.8■■□□□ 1.08
SCARF1-202ENST00000348987 L2HGDHQ9H9P8 463 aa21.8■■□□□ 1.08
SCARF1-202ENST00000348987 C1orf167Q5SNV9 1468 aa21.8■■□□□ 1.08
SCARF1-202ENST00000348987 POLR3GO15318 223 aaPredicted RBP21.8■■□□□ 1.08
SCARF1-202ENST00000348987 ARHGAP29Q52LW3 1261 aa21.8■■□□□ 1.08
SCARF1-202ENST00000348987 NEK11Q8NG66 645 aa21.8■■□□□ 1.08
SCARF1-202ENST00000348987 KCNB2Q92953 911 aa21.8■■□□□ 1.08
SCARF1-202ENST00000348987 NDUFB9Q9Y6M9 179 aa21.79■■□□□ 1.08
SCARF1-202ENST00000348987 UTYO14607 1347 aa21.79■■□□□ 1.08
SCARF1-202ENST00000348987 CHGBP05060 677 aa21.79■■□□□ 1.08
SCARF1-202ENST00000348987 CEBPZQ03701 1054 aaKnown RBP21.79■■□□□ 1.08
SCARF1-202ENST00000348987 XAGE3Q8WTP9 111 aa21.79■■□□□ 1.08
SCARF1-202ENST00000348987 MAP4K1Q92918 833 aa21.79■■□□□ 1.08
SCARF1-202ENST00000348987 DDX11Q96FC9 970 aa21.79■■□□□ 1.08
SCARF1-202ENST00000348987 KIF2AO00139 706 aaPredicted RBP21.78■■□□□ 1.08
SCARF1-202ENST00000348987 E4F1Q66K89 784 aaPredicted RBP21.78■■□□□ 1.08
SCARF1-202ENST00000348987 COPS6Q7L5N1 327 aa21.78■■□□□ 1.08
SCARF1-202ENST00000348987 ATF3P18847 181 aa21.78■■□□□ 1.08
SCARF1-202ENST00000348987 ZNF589Q86UQ0 364 aaPredicted RBP21.78■■□□□ 1.08
SCARF1-202ENST00000348987 DHX40Q8IX18 779 aaKnown RBP21.78■■□□□ 1.08
SCARF1-202ENST00000348987 TMEM94Q12767 1356 aa21.78■■□□□ 1.08
SCARF1-202ENST00000348987 DDX58O95786 925 aaKnown RBP21.77■■□□□ 1.08
SCARF1-202ENST00000348987 STX1AQ16623 288 aa21.77■■□□□ 1.08
SCARF1-202ENST00000348987 TSPYL1Q9H0U9 437 aa21.77■■□□□ 1.08
SCARF1-202ENST00000348987 PHRF1Q9P1Y6 1649 aaKnown RBP21.77■■□□□ 1.08
SCARF1-202ENST00000348987 NEURL1BA8MQ27 555 aa21.77■■□□□ 1.08
SCARF1-202ENST00000348987 SLC27A2O14975 620 aa21.77■■□□□ 1.08
SCARF1-202ENST00000348987 CCDC93Q567U6 631 aa21.77■■□□□ 1.08
SCARF1-202ENST00000348987 FBXW7Q969H0 707 aa21.77■■□□□ 1.08
SCARF1-202ENST00000348987 ZNF496Q96IT1 587 aaPredicted RBP21.77■■□□□ 1.08
SCARF1-202ENST00000348987 MYD88Q99836 296 aa21.77■■□□□ 1.08
SCARF1-202ENST00000348987 FSD1Q9BTV5 496 aa21.77■■□□□ 1.08
SCARF1-202ENST00000348987 KCND1Q9NSA2 647 aa21.77■■□□□ 1.08
SCARF1-202ENST00000348987 GORABQ5T7V8 394 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 196.9 ms