RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 LRRN4CLQ8ND94 238 aa12.06□□□□□ -0.48
CHRNA1-202ENST00000348749 BICD2Q8TD16 824 aa12.06□□□□□ -0.48
CHRNA1-202ENST00000348749 SMARCE1Q969G3 411 aa12.06□□□□□ -0.48
CHRNA1-202ENST00000348749 ATG3Q9NT62 314 aa12.06□□□□□ -0.48
CHRNA1-202ENST00000348749 USP16Q9Y5T5 823 aa12.06□□□□□ -0.48
CHRNA1-202ENST00000348749 EID1Q9Y6B2 187 aa12.06□□□□□ -0.48
CHRNA1-202ENST00000348749 PHLPP2Q6ZVD8 1323 aa12.06□□□□□ -0.48
CHRNA1-202ENST00000348749 SOCS7O14512 581 aa12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 DHX16O60231 1041 aaKnown RBP12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 ADCK5Q3MIX3 580 aa12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 CCDC158Q5M9N0 1113 aa12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 FAM173BQ6P4H8 233 aa12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 PAXIP1Q6ZW49 1069 aaPredicted RBP12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 FERMT3Q86UX7 667 aa12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 DHX40Q8IX18 779 aaKnown RBP12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 GOLGA5Q8TBA6 731 aa12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 UBXN4Q92575 508 aa12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 PHAXQ9H814 394 aaKnown RBP12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 TPCN1Q9ULQ1 816 aa12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 ADCY9O60503 1353 aa12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 POLR3GO15318 223 aaPredicted RBP12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 NLRP6P59044 892 aa12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 ST5P78524 1137 aa12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 NECAB1Q8N987 351 aa12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 FBXO18Q8NFZ0 1043 aa12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 MAP4K1Q92918 833 aa12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 HMG20BQ9P0W2 317 aa12.05□□□□□ -0.48
CHRNA1-202ENST00000348749 BECN2A8MW95 431 aa12.04□□□□□ -0.48
CHRNA1-202ENST00000348749 EFCAB8A8MWE9 144 aa12.04□□□□□ -0.48
CHRNA1-202ENST00000348749 CCP110O43303 1012 aa12.04□□□□□ -0.48
CHRNA1-202ENST00000348749 NBPF7P0C2Y1 421 aaPredicted RBP12.04□□□□□ -0.48
CHRNA1-202ENST00000348749 OAS2P29728 719 aaKnown RBP12.04□□□□□ -0.48
CHRNA1-202ENST00000348749 TSGA10IPQ3SY00 556 aa12.04□□□□□ -0.48
CHRNA1-202ENST00000348749 CCDC191Q8NCU4 936 aa12.04□□□□□ -0.48
CHRNA1-202ENST00000348749 EXOC4Q96A65 974 aa12.04□□□□□ -0.48
CHRNA1-202ENST00000348749 ANO10Q9NW15 660 aa12.04□□□□□ -0.48
CHRNA1-202ENST00000348749 TFIP11Q9UBB9 837 aaKnown RBP12.04□□□□□ -0.48
CHRNA1-202ENST00000348749 AMOTL2Q9Y2J4 779 aa12.04□□□□□ -0.48
CHRNA1-202ENST00000348749 JCADQ9P266 1359 aa12.04□□□□□ -0.48
CHRNA1-202ENST00000348749 MYH15Q9Y2K3 1946 aa12.04□□□□□ -0.48
CHRNA1-202ENST00000348749 LTN1O94822 1766 aa12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 SOX12O15370 315 aa12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 TADA3O75528 432 aa12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 MAP4K4O95819 1239 aaPredicted RBP12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 IFIT2P09913 472 aaKnown RBP12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 LTKP29376 864 aa12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 OS9Q13438 667 aaPredicted RBP12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 PRPF40BQ6NWY9 871 aaKnown RBP12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 NBPF11Q86T75 865 aa12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 SRLQ86TD4 932 aa12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 NECTIN2Q92692 538 aa12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 AK7Q96M32 723 aa12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 BRMS1Q9HCU9 246 aa12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 DBF4Q9UBU7 674 aaPredicted RBP12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 SPG7Q9UQ90 795 aa12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 PI4KAP2A4QPH2 592 aa12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 TBC1D8O95759 1140 aa12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 ETF1P62495 437 aaKnown RBP12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 PTH1RQ03431 593 aa12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 CREB3L3Q68CJ9 461 aa12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 CERS3Q8IU89 383 aa12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 PI4KAP1Q8N8J0 262 aa12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 UTYO14607 1347 aa12.03□□□□□ -0.48
CHRNA1-202ENST00000348749 NRDCO43847 1150 aa12.02□□□□□ -0.49
CHRNA1-202ENST00000348749 RESTQ13127 1097 aa12.02□□□□□ -0.49
CHRNA1-202ENST00000348749 SMC1AQ14683 1233 aaKnown RBP12.02□□□□□ -0.49
CHRNA1-202ENST00000348749 ICE2Q659A1 982 aa12.02□□□□□ -0.49
CHRNA1-202ENST00000348749 LARP1Q6PKG0 1096 aaKnown RBP12.02□□□□□ -0.49
CHRNA1-202ENST00000348749 REXO1L1PQ8IX06 675 aa12.02□□□□□ -0.49
CHRNA1-202ENST00000348749 C10orf67Q8IYJ2 551 aa12.02□□□□□ -0.49
CHRNA1-202ENST00000348749 RBM8AQ9Y5S9 174 aaKnown RBP12.02□□□□□ -0.49
CHRNA1-202ENST00000348749 RFX7Q2KHR2 1363 aa12.02□□□□□ -0.49
CHRNA1-202ENST00000348749 MRC1P22897 1456 aa12.02□□□□□ -0.49
CHRNA1-202ENST00000348749 DTNBO60941 627 aa12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 KRT32Q14532 448 aa12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 CC2D1AQ6P1N0 951 aaPredicted RBP12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 CEP57L1Q8IYX8 460 aa12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 GOLGA6L1Q8N7Z2 621 aa12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 MNS1Q8NEH6 495 aa12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 IP6K1Q92551 441 aa12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 CHPF2Q9P2E5 772 aa12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 DNAI1Q9UI46 699 aa12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 LCMT1Q9UIC8 334 aa12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 CFAP45Q9UL16 551 aa12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 RRP15Q9Y3B9 282 aaKnown RBP12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 PLEKHG2Q9H7P9 1386 aa12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 NUTM2FA1L443 756 aa12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 TRIM66O15016 1216 aa12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 SASH3O75995 380 aa12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 GTF2A1P52655 376 aaPredicted RBP12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 LRRFIP1Q32MZ4 808 aaKnown RBP12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 AKAP4Q5JQC9 854 aa12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 ARMCX5Q6P1M9 558 aa12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 TICAM2Q86XR7 235 aa12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 NAT10Q9H0A0 1025 aaKnown RBP12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 ZSCAN16Q9H4T2 348 aaPredicted RBP12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 ADAMTSL3P82987 1691 aa12.01□□□□□ -0.49
CHRNA1-202ENST00000348749 HEG1Q9ULI3 1381 aa12□□□□□ -0.49
CHRNA1-202ENST00000348749 MED23Q9ULK4 1368 aa12□□□□□ -0.49
CHRNA1-202ENST00000348749 SEC31AO94979 1220 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms