RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 CCDC152Q4G0S7 254 aa27.13■■□□□ 1.93
TNFRSF10B-202ENST00000347739 SNX14Q9Y5W7 946 aa27.13■■□□□ 1.93
TNFRSF10B-202ENST00000347739 MROH5Q6ZUA9 1318 aa27.12■■□□□ 1.93
TNFRSF10B-202ENST00000347739 IFIT1P09914 478 aaKnown RBP27.12■■□□□ 1.93
TNFRSF10B-202ENST00000347739 ATP2B3Q16720 1220 aa27.12■■□□□ 1.93
TNFRSF10B-202ENST00000347739 MAP4K1Q92918 833 aa27.12■■□□□ 1.93
TNFRSF10B-202ENST00000347739 FAM177BA6PVY3 158 aa27.11■■□□□ 1.93
TNFRSF10B-202ENST00000347739 GNPATO15228 680 aa27.11■■□□□ 1.93
TNFRSF10B-202ENST00000347739 NDUFB9Q9Y6M9 179 aa27.11■■□□□ 1.93
TNFRSF10B-202ENST00000347739 BRWD3Q6RI45 1802 aa27.1■■□□□ 1.93
TNFRSF10B-202ENST00000347739 PDE8BO95263 885 aa27.1■■□□□ 1.93
TNFRSF10B-202ENST00000347739 DDX46Q7L014 1031 aaKnown RBP27.1■■□□□ 1.93
TNFRSF10B-202ENST00000347739 BCL2L12Q9HB09 334 aa27.1■■□□□ 1.93
TNFRSF10B-202ENST00000347739 RTCBQ9Y3I0 505 aaKnown RBP27.1■■□□□ 1.93
TNFRSF10B-202ENST00000347739 ADORA1P30542 326 aa27.1■■□□□ 1.93
TNFRSF10B-202ENST00000347739 NECTIN1Q15223 517 aa27.1■■□□□ 1.93
TNFRSF10B-202ENST00000347739 CASZ1Q86V15 1759 aa27.09■■□□□ 1.93
TNFRSF10B-202ENST00000347739 C4AP0C0L4 1744 aa27.09■■□□□ 1.93
TNFRSF10B-202ENST00000347739 GOLIM4O00461 696 aa27.09■■□□□ 1.93
TNFRSF10B-202ENST00000347739 TTC39AQ5SRH9 613 aa27.09■■□□□ 1.93
TNFRSF10B-202ENST00000347739 GORABQ5T7V8 394 aa27.09■■□□□ 1.93
TNFRSF10B-202ENST00000347739 RASEFQ8IZ41 740 aa27.08■■□□□ 1.93
TNFRSF10B-202ENST00000347739 ZNF512BQ96KM6 892 aaPredicted RBP27.08■■□□□ 1.93
TNFRSF10B-202ENST00000347739 FAM196AQ6ZSG2 479 aa27.07■■□□□ 1.92
TNFRSF10B-202ENST00000347739 USPL1Q5W0Q7 1092 aa27.07■■□□□ 1.92
TNFRSF10B-202ENST00000347739 ZNF589Q86UQ0 364 aaPredicted RBP27.07■■□□□ 1.92
TNFRSF10B-202ENST00000347739 RBM8AQ9Y5S9 174 aaKnown RBP27.07■■□□□ 1.92
TNFRSF10B-202ENST00000347739 ZPR1O75312 459 aa27.06■■□□□ 1.92
TNFRSF10B-202ENST00000347739 FRAT2O75474 233 aaPredicted RBP27.06■■□□□ 1.92
TNFRSF10B-202ENST00000347739 MCMDC2Q4G0Z9 681 aa27.06■■□□□ 1.92
TNFRSF10B-202ENST00000347739 TBC1D9BQ66K14 1250 aa27.06■■□□□ 1.92
TNFRSF10B-202ENST00000347739 TAF5LO75529 589 aa27.05■■□□□ 1.92
TNFRSF10B-202ENST00000347739 PUM3Q15397 648 aaKnown RBP27.05■■□□□ 1.92
TNFRSF10B-202ENST00000347739 PRPF40BQ6NWY9 871 aaKnown RBP27.05■■□□□ 1.92
TNFRSF10B-202ENST00000347739 MPHOSPH8Q99549 860 aa27.05■■□□□ 1.92
TNFRSF10B-202ENST00000347739 TM6SF1Q9BZW5 370 aa27.05■■□□□ 1.92
TNFRSF10B-202ENST00000347739 NYXQ9GZU5 481 aa27.05■■□□□ 1.92
TNFRSF10B-202ENST00000347739 HELLSQ9NRZ9 838 aa27.05■■□□□ 1.92
TNFRSF10B-202ENST00000347739 FGFR2P21802 821 aa27.04■■□□□ 1.92
TNFRSF10B-202ENST00000347739 SF3B3Q15393 1217 aaKnown RBP27.04■■□□□ 1.92
TNFRSF10B-202ENST00000347739 SLC10A5Q5PT55 438 aa27.04■■□□□ 1.92
TNFRSF10B-202ENST00000347739 KRT27Q7Z3Y8 459 aa27.04■■□□□ 1.92
TNFRSF10B-202ENST00000347739 SEC31BQ9NQW1 1179 aa27.04■■□□□ 1.92
TNFRSF10B-202ENST00000347739 ERFEQ4G0M1 354 aa27.04■■□□□ 1.92
TNFRSF10B-202ENST00000347739 LPIN2Q92539 896 aa27.04■■□□□ 1.92
TNFRSF10B-202ENST00000347739 UPF3BQ9BZI7 483 aaKnown RBP27.04■■□□□ 1.92
TNFRSF10B-202ENST00000347739 AKAP11Q9UKA4 1901 aa27.03■■□□□ 1.92
TNFRSF10B-202ENST00000347739 ZKSCAN1P17029 563 aaPredicted RBP27.03■■□□□ 1.92
TNFRSF10B-202ENST00000347739 IGHMBP2P38935 993 aaKnown RBP27.03■■□□□ 1.92
TNFRSF10B-202ENST00000347739 LRRFIP1Q32MZ4 808 aaKnown RBP27.03■■□□□ 1.92
TNFRSF10B-202ENST00000347739 CREB3L3Q68CJ9 461 aa27.03■■□□□ 1.92
TNFRSF10B-202ENST00000347739 ARHGEF1Q92888 912 aaKnown RBP27.03■■□□□ 1.92
TNFRSF10B-202ENST00000347739 CWC22Q9HCG8 908 aaKnown RBP27.03■■□□□ 1.92
TNFRSF10B-202ENST00000347739 SRP68Q9UHB9 627 aaKnown RBP27.03■■□□□ 1.92
TNFRSF10B-202ENST00000347739 ZMYM1Q5SVZ6 1142 aa27.02■■□□□ 1.92
TNFRSF10B-202ENST00000347739 RNF20Q5VTR2 975 aa27.02■■□□□ 1.92
TNFRSF10B-202ENST00000347739 TMX3Q96JJ7 454 aa27.02■■□□□ 1.92
TNFRSF10B-202ENST00000347739 TTC14Q96N46 770 aa27.02■■□□□ 1.92
TNFRSF10B-202ENST00000347739 SSFA2P28290 1259 aa27.02■■□□□ 1.92
TNFRSF10B-202ENST00000347739 KCNJ4P48050 445 aa27.02■■□□□ 1.92
TNFRSF10B-202ENST00000347739 CUL4AQ13619 759 aa27.02■■□□□ 1.92
TNFRSF10B-202ENST00000347739 SMIM5Q71RC9 77 aa27.02■■□□□ 1.92
TNFRSF10B-202ENST00000347739 SETDB2Q96T68 719 aa27.02■■□□□ 1.92
TNFRSF10B-202ENST00000347739 CDC5LQ99459 802 aaKnown RBP27.02■■□□□ 1.92
TNFRSF10B-202ENST00000347739 FOXD4L1Q9NU39 408 aa27.02■■□□□ 1.92
TNFRSF10B-202ENST00000347739 HMG20BQ9P0W2 317 aa27.02■■□□□ 1.92
TNFRSF10B-202ENST00000347739 SLC27A2O14975 620 aa27.01■■□□□ 1.91
TNFRSF10B-202ENST00000347739 ADRA2BP18089 450 aa27.01■■□□□ 1.91
TNFRSF10B-202ENST00000347739 RAB3GAP1Q15042 981 aa27.01■■□□□ 1.91
TNFRSF10B-202ENST00000347739 AMIGO3Q86WK7 504 aa27.01■■□□□ 1.91
TNFRSF10B-202ENST00000347739 LRRC4BQ9NT99 713 aa27.01■■□□□ 1.91
TNFRSF10B-202ENST00000347739 UBR3Q6ZT12 1888 aa27.01■■□□□ 1.91
TNFRSF10B-202ENST00000347739 RNF113AO15541 343 aaKnown RBP27■■□□□ 1.91
TNFRSF10B-202ENST00000347739 FKBP4Q02790 459 aaKnown RBP eCLIP27■■□□□ 1.91
TNFRSF10B-202ENST00000347739 TSGA10IPQ3SY00 556 aa27■■□□□ 1.91
TNFRSF10B-202ENST00000347739 SLC27A3Q5K4L6 730 aa27■■□□□ 1.91
TNFRSF10B-202ENST00000347739 MYH7P12883 1935 aa27■■□□□ 1.91
TNFRSF10B-202ENST00000347739 RPAP1Q9BWH6 1393 aaPredicted RBP27■■□□□ 1.91
TNFRSF10B-202ENST00000347739 ZFYP08048 801 aaPredicted RBP26.99■■□□□ 1.91
TNFRSF10B-202ENST00000347739 ARID4AP29374 1257 aaPredicted RBP26.99■■□□□ 1.91
TNFRSF10B-202ENST00000347739 SCARF1Q14162 830 aa26.99■■□□□ 1.91
TNFRSF10B-202ENST00000347739 ZSWIM6Q9HCJ5 1215 aa26.99■■□□□ 1.91
TNFRSF10B-202ENST00000347739 A0A1B0GUL6 1792 aa26.99■■□□□ 1.91
TNFRSF10B-202ENST00000347739 CHGBP05060 677 aa26.99■■□□□ 1.91
TNFRSF10B-202ENST00000347739 SLC5A1P13866 664 aa26.99■■□□□ 1.91
TNFRSF10B-202ENST00000347739 TRAPPC3LQ5T215 181 aa26.99■■□□□ 1.91
TNFRSF10B-202ENST00000347739 BICDL1Q6ZP65 573 aa26.99■■□□□ 1.91
TNFRSF10B-202ENST00000347739 SEC62Q99442 399 aaKnown RBP26.99■■□□□ 1.91
TNFRSF10B-202ENST00000347739 UQCRFS1P1P0C7P4 283 aa26.98■■□□□ 1.91
TNFRSF10B-202ENST00000347739 CASTP20810 708 aaKnown RBP26.98■■□□□ 1.91
TNFRSF10B-202ENST00000347739 MCAMP43121 646 aa26.98■■□□□ 1.91
TNFRSF10B-202ENST00000347739 ZAP70P43403 619 aa26.98■■□□□ 1.91
TNFRSF10B-202ENST00000347739 ZNF772Q68DY9 489 aaPredicted RBP26.98■■□□□ 1.91
TNFRSF10B-202ENST00000347739 INTS4Q96HW7 963 aaKnown RBP26.98■■□□□ 1.91
TNFRSF10B-202ENST00000347739 U3KPZ7 1027 aaPredicted RBP26.98■■□□□ 1.91
TNFRSF10B-202ENST00000347739 COL4A1P02462 1669 aa26.97■■□□□ 1.91
TNFRSF10B-202ENST00000347739 RFC4P35249 363 aa26.97■■□□□ 1.91
TNFRSF10B-202ENST00000347739 JAKMIP1Q96N16 626 aaKnown RBP26.97■■□□□ 1.91
TNFRSF10B-202ENST00000347739 GTF2E1P29083 439 aaPredicted RBP26.96■■□□□ 1.91
TNFRSF10B-202ENST00000347739 ADCK5Q3MIX3 580 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms