RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 RUFY2Q8WXA3 655 aa26.06■■□□□ 1.76
TSPAN3-202ENST00000346495 CDC5LQ99459 802 aaKnown RBP26.06■■□□□ 1.76
TSPAN3-202ENST00000346495 EPB41L2O43491 1005 aaKnown RBP26.05■■□□□ 1.76
TSPAN3-202ENST00000346495 PDE8BO95263 885 aa26.05■■□□□ 1.76
TSPAN3-202ENST00000346495 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.05■■□□□ 1.76
TSPAN3-202ENST00000346495 NFIXQ14938 502 aa26.04■■□□□ 1.76
TSPAN3-202ENST00000346495 CCDC158Q5M9N0 1113 aa26.04■■□□□ 1.76
TSPAN3-202ENST00000346495 XAGE2Q96GT9 111 aa26.04■■□□□ 1.76
TSPAN3-202ENST00000346495 SGSM2O43147 1006 aa26.03■■□□□ 1.76
TSPAN3-202ENST00000346495 GORABQ5T7V8 394 aa26.03■■□□□ 1.76
TSPAN3-202ENST00000346495 NLRP3Q96P20 1036 aa26.03■■□□□ 1.76
TSPAN3-202ENST00000346495 FSD1Q9BTV5 496 aa26.03■■□□□ 1.76
TSPAN3-202ENST00000346495 GYS1P13807 737 aa26.03■■□□□ 1.76
TSPAN3-202ENST00000346495 RFX7Q2KHR2 1363 aa26.02■■□□□ 1.76
TSPAN3-202ENST00000346495 C3orf67Q6ZVT6 689 aa26.02■■□□□ 1.76
TSPAN3-202ENST00000346495 ANO2Q9NQ90 1003 aa26.02■■□□□ 1.76
TSPAN3-202ENST00000346495 ARAP2Q8WZ64 1704 aa26.02■■□□□ 1.76
TSPAN3-202ENST00000346495 CWC27Q6UX04 472 aaKnown RBP26.01■■□□□ 1.75
TSPAN3-202ENST00000346495 DNAJC2Q99543 621 aaKnown RBP26.01■■□□□ 1.75
TSPAN3-202ENST00000346495 KIF2CQ99661 725 aa26.01■■□□□ 1.75
TSPAN3-202ENST00000346495 EP400Q96L91 3159 aa26.01■■□□□ 1.75
TSPAN3-202ENST00000346495 NPHP1O15259 732 aa26■■□□□ 1.75
TSPAN3-202ENST00000346495 IFIT1P09914 478 aaKnown RBP26■■□□□ 1.75
TSPAN3-202ENST00000346495 ADORA1P30542 326 aa26■■□□□ 1.75
TSPAN3-202ENST00000346495 PUM3Q15397 648 aaKnown RBP26■■□□□ 1.75
TSPAN3-202ENST00000346495 TTC39AQ5SRH9 613 aa26■■□□□ 1.75
TSPAN3-202ENST00000346495 ANKRD18AQ8IVF6 992 aa26■■□□□ 1.75
TSPAN3-202ENST00000346495 AKT1S1Q96B36 256 aa26■■□□□ 1.75
TSPAN3-202ENST00000346495 MCCP23508 829 aa25.99■■□□□ 1.75
TSPAN3-202ENST00000346495 TICAM2Q86XR7 235 aa25.99■■□□□ 1.75
TSPAN3-202ENST00000346495 TFCP2L1Q9NZI6 479 aa25.99■■□□□ 1.75
TSPAN3-202ENST00000346495 RAD50Q92878 1312 aa25.98■■□□□ 1.75
TSPAN3-202ENST00000346495 ZNF827Q17R98 1081 aa25.98■■□□□ 1.75
TSPAN3-202ENST00000346495 CNBD1Q8NA66 436 aa25.98■■□□□ 1.75
TSPAN3-202ENST00000346495 LPIN2Q92539 896 aa25.98■■□□□ 1.75
TSPAN3-202ENST00000346495 EDC3Q96F86 508 aaKnown RBP25.98■■□□□ 1.75
TSPAN3-202ENST00000346495 IL25Q9H293 177 aa25.98■■□□□ 1.75
TSPAN3-202ENST00000346495 FGFR2P21802 821 aa25.97■■□□□ 1.75
TSPAN3-202ENST00000346495 KIAA1211Q6ZU35 1233 aa25.97■■□□□ 1.75
TSPAN3-202ENST00000346495 ERICH6Q7L0X2 663 aa25.97■■□□□ 1.75
TSPAN3-202ENST00000346495 FLAD1Q8NFF5 587 aa25.97■■□□□ 1.75
TSPAN3-202ENST00000346495 PAG1Q9NWQ8 432 aa25.97■■□□□ 1.75
TSPAN3-202ENST00000346495 SLC5A1P13866 664 aa25.96■■□□□ 1.75
TSPAN3-202ENST00000346495 TM4SF1P30408 202 aa25.96■■□□□ 1.75
TSPAN3-202ENST00000346495 KBTBD3Q8NAB2 608 aa25.96■■□□□ 1.75
TSPAN3-202ENST00000346495 TNRC6CQ9HCJ0 1690 aaKnown RBP25.96■■□□□ 1.75
TSPAN3-202ENST00000346495 NMIQ13287 307 aaPredicted RBP25.96■■□□□ 1.75
TSPAN3-202ENST00000346495 HELBQ8NG08 1087 aaPredicted RBP25.96■■□□□ 1.75
TSPAN3-202ENST00000346495 ZNF512BQ96KM6 892 aaPredicted RBP25.96■■□□□ 1.75
TSPAN3-202ENST00000346495 BSDC1Q9NW68 430 aaPredicted RBP25.96■■□□□ 1.75
TSPAN3-202ENST00000346495 A0A1B0GUL6 1792 aa25.95■■□□□ 1.75
TSPAN3-202ENST00000346495 TAF1P21675 1872 aa25.95■■□□□ 1.74
TSPAN3-202ENST00000346495 COL4A1P02462 1669 aa25.95■■□□□ 1.74
TSPAN3-202ENST00000346495 SLC4A3P48751 1232 aa25.95■■□□□ 1.74
TSPAN3-202ENST00000346495 RABEP1Q15276 862 aa25.95■■□□□ 1.74
TSPAN3-202ENST00000346495 DDX46Q7L014 1031 aaKnown RBP25.95■■□□□ 1.74
TSPAN3-202ENST00000346495 TBC1D2Q9BYX2 928 aa25.95■■□□□ 1.74
TSPAN3-202ENST00000346495 NDUFB9Q9Y6M9 179 aa25.95■■□□□ 1.74
TSPAN3-202ENST00000346495 GOLIM4O00461 696 aa25.94■■□□□ 1.74
TSPAN3-202ENST00000346495 CHRNDQ07001 517 aa25.94■■□□□ 1.74
TSPAN3-202ENST00000346495 CCDC24Q8N4L8 307 aa25.94■■□□□ 1.74
TSPAN3-202ENST00000346495 SNX21Q969T3 373 aa25.94■■□□□ 1.74
TSPAN3-202ENST00000346495 LSG1Q9H089 658 aaKnown RBP25.94■■□□□ 1.74
TSPAN3-202ENST00000346495 SNRKQ9NRH2 765 aa25.94■■□□□ 1.74
TSPAN3-202ENST00000346495 SERPINB2P05120 415 aa25.93■■□□□ 1.74
TSPAN3-202ENST00000346495 PRR5LQ6MZQ0 368 aa25.93■■□□□ 1.74
TSPAN3-202ENST00000346495 FAM227BQ96M60 508 aa25.93■■□□□ 1.74
TSPAN3-202ENST00000346495 ANAPC15P60006 121 aa25.92■■□□□ 1.74
TSPAN3-202ENST00000346495 ST5P78524 1137 aa25.92■■□□□ 1.74
TSPAN3-202ENST00000346495 TAF5LO75529 589 aa25.92■■□□□ 1.74
TSPAN3-202ENST00000346495 UQCRFS1P1P0C7P4 283 aa25.92■■□□□ 1.74
TSPAN3-202ENST00000346495 RPS8P62241 208 aaKnown RBP25.92■■□□□ 1.74
TSPAN3-202ENST00000346495 HSCBQ8IWL3 235 aa25.92■■□□□ 1.74
TSPAN3-202ENST00000346495 CELF1Q92879 486 aaKnown RBP25.92■■□□□ 1.74
TSPAN3-202ENST00000346495 COL23A1Q86Y22 540 aaPredicted RBP25.91■■□□□ 1.74
TSPAN3-202ENST00000346495 AKAP11Q9UKA4 1901 aa25.9■■□□□ 1.74
TSPAN3-202ENST00000346495 A0A0D9SFI3 127 aa25.9■■□□□ 1.74
TSPAN3-202ENST00000346495 FKBP4Q02790 459 aaKnown RBP eCLIP25.9■■□□□ 1.74
TSPAN3-202ENST00000346495 LRRFIP1Q32MZ4 808 aaKnown RBP25.9■■□□□ 1.74
TSPAN3-202ENST00000346495 CCDC102BQ68D86 513 aa25.9■■□□□ 1.74
TSPAN3-202ENST00000346495 NLGN1Q8N2Q7 840 aa25.9■■□□□ 1.74
TSPAN3-202ENST00000346495 MED23Q9ULK4 1368 aa25.89■■□□□ 1.74
TSPAN3-202ENST00000346495 ARID4AP29374 1257 aaPredicted RBP25.89■■□□□ 1.74
TSPAN3-202ENST00000346495 HSPA4P34932 840 aa25.89■■□□□ 1.74
TSPAN3-202ENST00000346495 MINPP1Q9UNW1 487 aa25.89■■□□□ 1.74
TSPAN3-202ENST00000346495 POLRMTO00411 1230 aaKnown RBP25.88■■□□□ 1.73
TSPAN3-202ENST00000346495 SCARF1Q14162 830 aa25.88■■□□□ 1.73
TSPAN3-202ENST00000346495 IL17RAQ96F46 866 aa25.88■■□□□ 1.73
TSPAN3-202ENST00000346495 PHKA1P46020 1223 aa25.88■■□□□ 1.73
TSPAN3-202ENST00000346495 DDR1Q08345 913 aa25.88■■□□□ 1.73
TSPAN3-202ENST00000346495 MCAMP43121 646 aa25.87■■□□□ 1.73
TSPAN3-202ENST00000346495 ZAP70P43403 619 aa25.87■■□□□ 1.73
TSPAN3-202ENST00000346495 UBE4AQ14139 1066 aa25.87■■□□□ 1.73
TSPAN3-202ENST00000346495 CAMKK2Q96RR4 588 aa25.87■■□□□ 1.73
TSPAN3-202ENST00000346495 CCDC171Q6TFL3 1326 aa25.87■■□□□ 1.73
TSPAN3-202ENST00000346495 ANTXR1Q9H6X2 564 aa25.86■■□□□ 1.73
TSPAN3-202ENST00000346495 TTF1Q15361 905 aaPredicted RBP25.85■■□□□ 1.73
TSPAN3-202ENST00000346495 EZH2Q15910 746 aaKnown RBP25.85■■□□□ 1.73
TSPAN3-202ENST00000346495 MCMDC2Q4G0Z9 681 aa25.85■■□□□ 1.73
TSPAN3-202ENST00000346495 ANKRD2Q9GZV1 360 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms