RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 MAP3K19Q56UN5 1328 aa12.58□□□□□ -0.4
CLCN6-202ENST00000346436 PARP10Q53GL7 1025 aa12.58□□□□□ -0.4
CLCN6-202ENST00000346436 CATIPQ7Z7H3 387 aa12.58□□□□□ -0.4
CLCN6-202ENST00000346436 C16orf45Q96MC5 204 aaPredicted RBP12.58□□□□□ -0.4
CLCN6-202ENST00000346436 ANTXR1Q9H6X2 564 aa12.58□□□□□ -0.4
CLCN6-202ENST00000346436 CETN2P41208 172 aa12.58□□□□□ -0.4
CLCN6-202ENST00000346436 ANKRD13DQ6ZTN6 518 aa12.58□□□□□ -0.4
CLCN6-202ENST00000346436 SH2B1Q9NRF2 756 aaPredicted RBP12.58□□□□□ -0.4
CLCN6-202ENST00000346436 EVI5LQ96CN4 794 aa12.58□□□□□ -0.4
CLCN6-202ENST00000346436 GCP02774 474 aa12.58□□□□□ -0.4
CLCN6-202ENST00000346436 BRPF1P55201 1214 aaPredicted RBP12.58□□□□□ -0.4
CLCN6-202ENST00000346436 APBB1IPQ7Z5R6 666 aaPredicted RBP12.58□□□□□ -0.4
CLCN6-202ENST00000346436 PREX2Q70Z35 1606 aa12.58□□□□□ -0.4
CLCN6-202ENST00000346436 ARHGAP27Q6ZUM4 889 aa12.57□□□□□ -0.4
CLCN6-202ENST00000346436 GPHNQ9NQX3 736 aaPredicted RBP12.57□□□□□ -0.4
CLCN6-202ENST00000346436 CFAP45Q9UL16 551 aa12.57□□□□□ -0.4
CLCN6-202ENST00000346436 SERPINC1P01008 464 aa12.57□□□□□ -0.4
CLCN6-202ENST00000346436 UBE2HP62256 183 aa12.57□□□□□ -0.4
CLCN6-202ENST00000346436 KAT14Q9H8E8 782 aa12.57□□□□□ -0.4
CLCN6-202ENST00000346436 TSPY2A6NKD2 308 aa12.57□□□□□ -0.4
CLCN6-202ENST00000346436 UBE3BQ7Z3V4 1068 aa12.57□□□□□ -0.4
CLCN6-202ENST00000346436 NOP2P46087 812 aaKnown RBP12.56□□□□□ -0.4
CLCN6-202ENST00000346436 PLS1Q14651 629 aa12.56□□□□□ -0.4
CLCN6-202ENST00000346436 SNRKQ9NRH2 765 aa12.56□□□□□ -0.4
CLCN6-202ENST00000346436 TRMT1Q9NXH9 659 aaKnown RBP12.56□□□□□ -0.4
CLCN6-202ENST00000346436 RBM8AQ9Y5S9 174 aaKnown RBP12.56□□□□□ -0.4
CLCN6-202ENST00000346436 F8W031 263 aaPredicted RBP12.56□□□□□ -0.4
CLCN6-202ENST00000346436 GOLIM4O00461 696 aa12.56□□□□□ -0.4
CLCN6-202ENST00000346436 SPC25Q9HBM1 224 aa12.56□□□□□ -0.4
CLCN6-202ENST00000346436 CHL1O00533 1208 aa12.55□□□□□ -0.4
CLCN6-202ENST00000346436 HAND2P61296 217 aa12.55□□□□□ -0.4
CLCN6-202ENST00000346436 CLIP2Q9UDT6 1046 aa12.55□□□□□ -0.4
CLCN6-202ENST00000346436 GADD45BO75293 160 aaPredicted RBP12.55□□□□□ -0.4
CLCN6-202ENST00000346436 ISM2Q6H9L7 571 aa12.55□□□□□ -0.4
CLCN6-202ENST00000346436 PDCL2Q8N4E4 241 aa12.55□□□□□ -0.4
CLCN6-202ENST00000346436 CCDC194A0A1B0GVG4 234 aa12.55□□□□□ -0.4
CLCN6-202ENST00000346436 BIN1O00499 593 aa12.55□□□□□ -0.4
CLCN6-202ENST00000346436 F13A1P00488 732 aa12.55□□□□□ -0.4
CLCN6-202ENST00000346436 SCAND2PQ9GZW5 306 aaPredicted RBP12.55□□□□□ -0.4
CLCN6-202ENST00000346436 LMBRD1Q9NUN5 540 aa12.55□□□□□ -0.4
CLCN6-202ENST00000346436 SAMM50Q9Y512 469 aa12.55□□□□□ -0.4
CLCN6-202ENST00000346436 ZKSCAN5Q9Y2L8 839 aa12.55□□□□□ -0.4
CLCN6-202ENST00000346436 NMIQ13287 307 aaPredicted RBP12.54□□□□□ -0.4
CLCN6-202ENST00000346436 TAF12Q16514 161 aa12.54□□□□□ -0.4
CLCN6-202ENST00000346436 CEP57L1Q8IYX8 460 aa12.54□□□□□ -0.4
CLCN6-202ENST00000346436 PIBF1Q8WXW3 757 aa12.54□□□□□ -0.4
CLCN6-202ENST00000346436 ABCC4O15439 1325 aa12.54□□□□□ -0.4
CLCN6-202ENST00000346436 ZNF213O14771 459 aa12.54□□□□□ -0.4
CLCN6-202ENST00000346436 HMGB1P09429 215 aaKnown RBP12.54□□□□□ -0.4
CLCN6-202ENST00000346436 BMS1Q14692 1282 aaKnown RBP12.54□□□□□ -0.4
CLCN6-202ENST00000346436 C17orf53Q8N3J3 647 aaPredicted RBP12.54□□□□□ -0.4
CLCN6-202ENST00000346436 TNFAIP1Q13829 316 aa12.54□□□□□ -0.4
CLCN6-202ENST00000346436 CCDC82Q8N4S0 544 aa12.54□□□□□ -0.4
CLCN6-202ENST00000346436 FAM173BQ6P4H8 233 aa12.54□□□□□ -0.4
CLCN6-202ENST00000346436 ZBTB24O43167 697 aaPredicted RBP12.53□□□□□ -0.4
CLCN6-202ENST00000346436 ANAPC15P60006 121 aa12.53□□□□□ -0.4
CLCN6-202ENST00000346436 DPP8Q6V1X1 898 aaPredicted RBP12.53□□□□□ -0.4
CLCN6-202ENST00000346436 BRF1Q92994 677 aa12.53□□□□□ -0.4
CLCN6-202ENST00000346436 PALD1Q9ULE6 856 aa12.53□□□□□ -0.4
CLCN6-202ENST00000346436 ERCC6L2Q5T890 1561 aa12.53□□□□□ -0.4
CLCN6-202ENST00000346436 FLT4P35916 1363 aa12.53□□□□□ -0.4
CLCN6-202ENST00000346436 CETN1Q12798 172 aa12.53□□□□□ -0.4
CLCN6-202ENST00000346436 SIRT2Q8IXJ6 389 aa12.53□□□□□ -0.4
CLCN6-202ENST00000346436 RUFY1Q96T51 708 aa12.53□□□□□ -0.4
CLCN6-202ENST00000346436 PABPC4Q13310 644 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLCN6-202ENST00000346436 DHX8Q14562 1220 aaKnown RBP12.53□□□□□ -0.4
CLCN6-202ENST00000346436 RIMBP2O15034 1052 aa12.53□□□□□ -0.4
CLCN6-202ENST00000346436 KLHDC4Q8TBB5 520 aa12.53□□□□□ -0.4
CLCN6-202ENST00000346436 TSG101Q99816 390 aa12.53□□□□□ -0.4
CLCN6-202ENST00000346436 TMEM63CQ9P1W3 806 aa12.53□□□□□ -0.4
CLCN6-202ENST00000346436 SLC12A7Q9Y666 1083 aa12.53□□□□□ -0.4
CLCN6-202ENST00000346436 SOS1Q07889 1333 aaPredicted RBP12.52□□□□□ -0.4
CLCN6-202ENST00000346436 SYT1P21579 422 aa12.52□□□□□ -0.4
CLCN6-202ENST00000346436 DACT1Q9NYF0 836 aa12.52□□□□□ -0.4
CLCN6-202ENST00000346436 ZRSR2Q15696 482 aaKnown RBP12.52□□□□□ -0.4
CLCN6-202ENST00000346436 CERS3Q8IU89 383 aa12.52□□□□□ -0.4
CLCN6-202ENST00000346436 CNKSR1Q969H4 720 aa12.52□□□□□ -0.4
CLCN6-202ENST00000346436 NEK1Q96PY6 1258 aa12.52□□□□□ -0.4
CLCN6-202ENST00000346436 CSADQ9Y600 493 aa12.52□□□□□ -0.4
CLCN6-202ENST00000346436 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.52□□□□□ -0.4
CLCN6-202ENST00000346436 ZNF165P49910 485 aa12.52□□□□□ -0.41
CLCN6-202ENST00000346436 NOLC1Q14978 699 aaKnown RBP eCLIP12.52□□□□□ -0.41
CLCN6-202ENST00000346436 ANO6Q4KMQ2 910 aa12.52□□□□□ -0.41
CLCN6-202ENST00000346436 NAA16Q6N069 864 aaPredicted RBP12.52□□□□□ -0.41
CLCN6-202ENST00000346436 CCDC117Q8IWD4 279 aaPredicted RBP12.52□□□□□ -0.41
CLCN6-202ENST00000346436 CCDC144CPQ8IYA2 1237 aa12.52□□□□□ -0.41
CLCN6-202ENST00000346436 XAGE3Q8WTP9 111 aa12.52□□□□□ -0.41
CLCN6-202ENST00000346436 CROCC2H7BZ55 1655 aa12.52□□□□□ -0.41
CLCN6-202ENST00000346436 NBPF7P0C2Y1 421 aaPredicted RBP12.52□□□□□ -0.41
CLCN6-202ENST00000346436 TSPY3P0CV98 308 aa12.52□□□□□ -0.41
CLCN6-202ENST00000346436 TSPY8P0CW00 308 aa12.52□□□□□ -0.41
CLCN6-202ENST00000346436 GNAQP50148 359 aa12.52□□□□□ -0.41
CLCN6-202ENST00000346436 CCDC181Q5TID7 509 aa12.52□□□□□ -0.41
CLCN6-202ENST00000346436 CHST3Q7LGC8 479 aa12.52□□□□□ -0.41
CLCN6-202ENST00000346436 ERMNQ8TAM6 284 aa12.52□□□□□ -0.41
CLCN6-202ENST00000346436 TMX1Q9H3N1 280 aa12.52□□□□□ -0.41
CLCN6-202ENST00000346436 NEO1Q92859 1461 aa12.52□□□□□ -0.41
CLCN6-202ENST00000346436 TNNT1P13805 278 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 TTC6Q86TZ1 520 aa12.51□□□□□ -0.41
CLCN6-202ENST00000346436 NLGN1Q8N2Q7 840 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms