RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 MAP3K5Q99683 1374 aa17.33■□□□□ 0.36
CLCN1-201ENST00000343257 LMAN1P49257 510 aa17.33■□□□□ 0.36
CLCN1-201ENST00000343257 EVCP57679 992 aa17.33■□□□□ 0.36
CLCN1-201ENST00000343257 TPM4P67936 248 aa17.33■□□□□ 0.36
CLCN1-201ENST00000343257 SCRN1Q12765 414 aa17.33■□□□□ 0.36
CLCN1-201ENST00000343257 BEND3Q5T5X7 828 aa17.33■□□□□ 0.36
CLCN1-201ENST00000343257 CHST3Q7LGC8 479 aa17.33■□□□□ 0.36
CLCN1-201ENST00000343257 KCNB2Q92953 911 aa17.33■□□□□ 0.36
CLCN1-201ENST00000343257 UTP14AQ9BVJ6 771 aaKnown RBP17.33■□□□□ 0.36
CLCN1-201ENST00000343257 KIF2AO00139 706 aaPredicted RBP17.32■□□□□ 0.36
CLCN1-201ENST00000343257 CCDC93Q567U6 631 aa17.32■□□□□ 0.36
CLCN1-201ENST00000343257 CAVIN2O95810 425 aa17.32■□□□□ 0.36
CLCN1-201ENST00000343257 KLHL34Q8N239 644 aa17.32■□□□□ 0.36
CLCN1-201ENST00000343257 ATP1A3P13637 1013 aa17.32■□□□□ 0.36
CLCN1-201ENST00000343257 NEK1Q96PY6 1258 aa17.32■□□□□ 0.36
CLCN1-201ENST00000343257 PREX1Q8TCU6 1659 aa17.31■□□□□ 0.36
CLCN1-201ENST00000343257 FANCGO15287 622 aa17.31■□□□□ 0.36
CLCN1-201ENST00000343257 ADD1P35611 737 aaKnown RBP17.31■□□□□ 0.36
CLCN1-201ENST00000343257 APOBRQ0VD83 1088 aa17.31■□□□□ 0.36
CLCN1-201ENST00000343257 SF3A1Q15459 793 aaKnown RBP17.31■□□□□ 0.36
CLCN1-201ENST00000343257 METP08581 1390 aa17.31■□□□□ 0.36
CLCN1-201ENST00000343257 ZRANB2O95218 330 aaKnown RBP eCLIP17.31■□□□□ 0.36
CLCN1-201ENST00000343257 ZSCAN26Q16670 478 aa17.31■□□□□ 0.36
CLCN1-201ENST00000343257 CHMP4CQ96CF2 233 aa17.31■□□□□ 0.36
CLCN1-201ENST00000343257 NAT10Q9H0A0 1025 aaKnown RBP17.31■□□□□ 0.36
CLCN1-201ENST00000343257 CTAGE5O15320 804 aa17.3■□□□□ 0.36
CLCN1-201ENST00000343257 POLR3DP05423 398 aaPredicted RBP17.3■□□□□ 0.36
CLCN1-201ENST00000343257 ETF1P62495 437 aaKnown RBP17.3■□□□□ 0.36
CLCN1-201ENST00000343257 FAM160A1Q05DH4 1040 aa17.3■□□□□ 0.36
CLCN1-201ENST00000343257 SMC1AQ14683 1233 aaKnown RBP17.3■□□□□ 0.36
CLCN1-201ENST00000343257 NDUFA8P51970 172 aa17.3■□□□□ 0.36
CLCN1-201ENST00000343257 AIMP1Q12904 312 aaKnown RBP17.3■□□□□ 0.36
CLCN1-201ENST00000343257 G3BP1Q13283 466 aaKnown RBP eCLIP17.3■□□□□ 0.36
CLCN1-201ENST00000343257 RAB11FIP4Q86YS3 637 aa17.3■□□□□ 0.36
CLCN1-201ENST00000343257 TEFQ10587 303 aa17.3■□□□□ 0.36
CLCN1-201ENST00000343257 ARHGEF10O15013 1369 aa17.29■□□□□ 0.36
CLCN1-201ENST00000343257 NRDCO43847 1150 aa17.29■□□□□ 0.36
CLCN1-201ENST00000343257 SASH1O94885 1247 aa17.29■□□□□ 0.36
CLCN1-201ENST00000343257 SKIDA1Q1XH10 827 aa17.29■□□□□ 0.36
CLCN1-201ENST00000343257 ZSCAN16Q9H4T2 348 aaPredicted RBP17.29■□□□□ 0.36
CLCN1-201ENST00000343257 PCDHA7Q9UN72 937 aa17.29■□□□□ 0.36
CLCN1-201ENST00000343257 ANKRD65E5RJM6 399 aa17.29■□□□□ 0.36
CLCN1-201ENST00000343257 TXLNBQ8N3L3 684 aa17.29■□□□□ 0.36
CLCN1-201ENST00000343257 OSBPL5Q9H0X9 879 aaPredicted RBP17.29■□□□□ 0.36
CLCN1-201ENST00000343257 RCOR1Q9UKL0 485 aa17.29■□□□□ 0.36
CLCN1-201ENST00000343257 PTPDC1A2A3K4 754 aa17.28■□□□□ 0.36
CLCN1-201ENST00000343257 PAXIP1Q6ZW49 1069 aaPredicted RBP17.28■□□□□ 0.36
CLCN1-201ENST00000343257 DPF2Q92785 391 aa17.28■□□□□ 0.36
CLCN1-201ENST00000343257 RASSF4Q9H2L5 321 aa17.28■□□□□ 0.36
CLCN1-201ENST00000343257 TBC1D8O95759 1140 aa17.28■□□□□ 0.36
CLCN1-201ENST00000343257 ENGASEQ8NFI3 743 aa17.28■□□□□ 0.36
CLCN1-201ENST00000343257 MAP3K2Q9Y2U5 619 aa17.28■□□□□ 0.36
CLCN1-201ENST00000343257 MYO1CO00159 1063 aa17.28■□□□□ 0.36
CLCN1-201ENST00000343257 PDILTQ8N807 584 aa17.28■□□□□ 0.36
CLCN1-201ENST00000343257 CCDC150Q8NCX0 1101 aa17.28■□□□□ 0.36
CLCN1-201ENST00000343257 LGR6Q9HBX8 967 aa17.28■□□□□ 0.36
CLCN1-201ENST00000343257 TAF5LO75529 589 aa17.27■□□□□ 0.36
CLCN1-201ENST00000343257 NPHP4O75161 1426 aaPredicted RBP17.27■□□□□ 0.35
CLCN1-201ENST00000343257 TADA3O75528 432 aa17.27■□□□□ 0.35
CLCN1-201ENST00000343257 SERPINC1P01008 464 aa17.27■□□□□ 0.35
CLCN1-201ENST00000343257 GJB4Q9NTQ9 266 aa17.27■□□□□ 0.35
CLCN1-201ENST00000343257 A0A0G2JLW4 131 aa17.26■□□□□ 0.35
CLCN1-201ENST00000343257 PSDA5PKW4 1024 aaPredicted RBP17.26■□□□□ 0.35
CLCN1-201ENST00000343257 GNG11P61952 73 aa17.26■□□□□ 0.35
CLCN1-201ENST00000343257 FANCCQ00597 558 aa17.26■□□□□ 0.35
CLCN1-201ENST00000343257 SLC20A2Q08357 652 aa17.26■□□□□ 0.35
CLCN1-201ENST00000343257 GPS2Q13227 327 aa17.26■□□□□ 0.35
CLCN1-201ENST00000343257 CFAP100Q494V2 611 aa17.26■□□□□ 0.35
CLCN1-201ENST00000343257 CC2D1AQ6P1N0 951 aaPredicted RBP17.26■□□□□ 0.35
CLCN1-201ENST00000343257 C14orf37Q86TY3 774 aa17.26■□□□□ 0.35
CLCN1-201ENST00000343257 MRPS27Q92552 414 aaKnown RBP17.26■□□□□ 0.35
CLCN1-201ENST00000343257 USP42Q9H9J4 1324 aaKnown RBP17.26■□□□□ 0.35
CLCN1-201ENST00000343257 STK38Q15208 465 aa17.26■□□□□ 0.35
CLCN1-201ENST00000343257 PROSER3Q2NL68 480 aa17.26■□□□□ 0.35
CLCN1-201ENST00000343257 TRIM65Q6PJ69 517 aa17.26■□□□□ 0.35
CLCN1-201ENST00000343257 NSUN7Q8NE18 718 aaKnown RBP17.26■□□□□ 0.35
CLCN1-201ENST00000343257 CLIC4Q9Y696 253 aa17.26■□□□□ 0.35
CLCN1-201ENST00000343257 MLH3Q9UHC1 1453 aa17.26■□□□□ 0.35
CLCN1-201ENST00000343257 TMEM232C9JQI7 657 aa17.25■□□□□ 0.35
CLCN1-201ENST00000343257 CYP21A2P08686 494 aa17.25■□□□□ 0.35
CLCN1-201ENST00000343257 MCM6Q14566 821 aa17.25■□□□□ 0.35
CLCN1-201ENST00000343257 ZNF396Q96N95 335 aaPredicted RBP17.25■□□□□ 0.35
CLCN1-201ENST00000343257 WDR24Q96S15 920 aa17.25■□□□□ 0.35
CLCN1-201ENST00000343257 KIAA1468Q9P260 1216 aa17.25■□□□□ 0.35
CLCN1-201ENST00000343257 IMPACTQ9P2X3 320 aa17.25■□□□□ 0.35
CLCN1-201ENST00000343257 GIGYF1O75420 1035 aaPredicted RBP17.25■□□□□ 0.35
CLCN1-201ENST00000343257 CTDNEP1O95476 244 aa17.25■□□□□ 0.35
CLCN1-201ENST00000343257 IRX3P78415 501 aaPredicted RBP17.25■□□□□ 0.35
CLCN1-201ENST00000343257 SUCLG2Q96I99 432 aa17.25■□□□□ 0.35
CLCN1-201ENST00000343257 HIP1O00291 1037 aa17.24■□□□□ 0.35
CLCN1-201ENST00000343257 KARSQ15046 597 aaKnown RBP17.24■□□□□ 0.35
CLCN1-201ENST00000343257 TSPYL1Q9H0U9 437 aa17.24■□□□□ 0.35
CLCN1-201ENST00000343257 BICC1Q9H694 974 aaKnown RBP17.24■□□□□ 0.35
CLCN1-201ENST00000343257 TMEM131LA2VDJ0 1609 aa17.24■□□□□ 0.35
CLCN1-201ENST00000343257 PRAMEF22A3QJZ6 481 aa17.24■□□□□ 0.35
CLCN1-201ENST00000343257 SLC3A2P08195 630 aaKnown RBP17.24■□□□□ 0.35
CLCN1-201ENST00000343257 AEBP2Q6ZN18 517 aaPredicted RBP17.24■□□□□ 0.35
CLCN1-201ENST00000343257 FMR1NBQ8N0W7 255 aaPredicted RBP17.24■□□□□ 0.35
CLCN1-201ENST00000343257 PARD6BQ9BYG5 372 aa17.24■□□□□ 0.35
CLCN1-201ENST00000343257 PARP3Q9Y6F1 533 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms