RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 URI1O94763 535 aaPredicted RBP17.8■□□□□ 0.44
SNX18-202ENST00000343017 SLC20A2Q08357 652 aa17.8■□□□□ 0.44
SNX18-202ENST00000343017 BEND3Q5T5X7 828 aa17.8■□□□□ 0.44
SNX18-202ENST00000343017 CCDC73Q6ZRK6 1079 aa17.8■□□□□ 0.44
SNX18-202ENST00000343017 CARD6Q9BX69 1037 aa17.8■□□□□ 0.44
SNX18-202ENST00000343017 CHPF2Q9P2E5 772 aa17.8■□□□□ 0.44
SNX18-202ENST00000343017 ME1P48163 572 aa17.79■□□□□ 0.44
SNX18-202ENST00000343017 ANKRD1Q15327 319 aa17.79■□□□□ 0.44
SNX18-202ENST00000343017 DPCR1Q3MIW9 517 aa17.79■□□□□ 0.44
SNX18-202ENST00000343017 CEP57L1Q8IYX8 460 aa17.79■□□□□ 0.44
SNX18-202ENST00000343017 LTV1Q96GA3 475 aaPredicted RBP17.79■□□□□ 0.44
SNX18-202ENST00000343017 CFAP45Q9UL16 551 aa17.79■□□□□ 0.44
SNX18-202ENST00000343017 USP42Q9H9J4 1324 aaKnown RBP17.79■□□□□ 0.44
SNX18-202ENST00000343017 GNAT3A8MTJ3 354 aa17.79■□□□□ 0.44
SNX18-202ENST00000343017 RNF20Q5VTR2 975 aa17.79■□□□□ 0.44
SNX18-202ENST00000343017 Q6ZUG5 572 aa17.79■□□□□ 0.44
SNX18-202ENST00000343017 EAF2Q96CJ1 260 aaPredicted RBP17.79■□□□□ 0.44
SNX18-202ENST00000343017 A0A1B0GVL5 298 aa17.78■□□□□ 0.44
SNX18-202ENST00000343017 SDF4Q9BRK5 362 aa17.78■□□□□ 0.44
SNX18-202ENST00000343017 SFPQP23246 707 aaKnown RBP eCLIP17.78■□□□□ 0.44
SNX18-202ENST00000343017 C10orf67Q8IYJ2 551 aa17.78■□□□□ 0.44
SNX18-202ENST00000343017 NPHP4O75161 1426 aaPredicted RBP17.78■□□□□ 0.44
SNX18-202ENST00000343017 KIF2AO00139 706 aaPredicted RBP17.78■□□□□ 0.44
SNX18-202ENST00000343017 GSDMDP57764 484 aa17.78■□□□□ 0.44
SNX18-202ENST00000343017 HSP90AB4PQ58FF6 505 aa17.78■□□□□ 0.44
SNX18-202ENST00000343017 DNAAF4Q8WXU2 420 aa17.78■□□□□ 0.44
SNX18-202ENST00000343017 OSBPL5Q9H0X9 879 aaPredicted RBP17.78■□□□□ 0.44
SNX18-202ENST00000343017 PTPRUQ92729 1446 aa17.77■□□□□ 0.44
SNX18-202ENST00000343017 OAS2P29728 719 aaKnown RBP17.77■□□□□ 0.44
SNX18-202ENST00000343017 AMPHP49418 695 aa17.77■□□□□ 0.44
SNX18-202ENST00000343017 MNS1Q8NEH6 495 aa17.77■□□□□ 0.44
SNX18-202ENST00000343017 ENGASEQ8NFI3 743 aa17.77■□□□□ 0.44
SNX18-202ENST00000343017 PLEKHG1Q9ULL1 1385 aa17.77■□□□□ 0.44
SNX18-202ENST00000343017 KCNQ3O43525 872 aa17.77■□□□□ 0.43
SNX18-202ENST00000343017 SCRN1Q12765 414 aa17.77■□□□□ 0.43
SNX18-202ENST00000343017 TEX35Q5T0J7 233 aa17.77■□□□□ 0.43
SNX18-202ENST00000343017 CCDC129Q6ZRS4 1044 aa17.77■□□□□ 0.43
SNX18-202ENST00000343017 RSPH14Q9UHP6 348 aa17.77■□□□□ 0.43
SNX18-202ENST00000343017 RCOR1Q9UKL0 485 aa17.77■□□□□ 0.43
SNX18-202ENST00000343017 PDIA4P13667 645 aaKnown RBP17.76■□□□□ 0.43
SNX18-202ENST00000343017 CCT2P78371 535 aaKnown RBP17.76■□□□□ 0.43
SNX18-202ENST00000343017 LMOD2Q6P5Q4 547 aa17.76■□□□□ 0.43
SNX18-202ENST00000343017 KLHDC4Q8TBB5 520 aa17.76■□□□□ 0.43
SNX18-202ENST00000343017 GPATCH3Q96I76 525 aa17.76■□□□□ 0.43
SNX18-202ENST00000343017 NRXN3Q9Y4C0 1643 aa17.76■□□□□ 0.43
SNX18-202ENST00000343017 TNNT3P45378 269 aaPredicted RBP17.76■□□□□ 0.43
SNX18-202ENST00000343017 ETF1P62495 437 aaKnown RBP17.76■□□□□ 0.43
SNX18-202ENST00000343017 PEAK1Q9H792 1746 aa17.76■□□□□ 0.43
SNX18-202ENST00000343017 DLC1Q96QB1 1528 aa17.76■□□□□ 0.43
SNX18-202ENST00000343017 CTAGE5O15320 804 aa17.76■□□□□ 0.43
SNX18-202ENST00000343017 GIGYF1O75420 1035 aaPredicted RBP17.76■□□□□ 0.43
SNX18-202ENST00000343017 LMOD1P29536 600 aaPredicted RBP17.76■□□□□ 0.43
SNX18-202ENST00000343017 SASH1O94885 1247 aa17.75■□□□□ 0.43
SNX18-202ENST00000343017 FAM160A1Q05DH4 1040 aa17.75■□□□□ 0.43
SNX18-202ENST00000343017 CWF19L2Q2TBE0 894 aaKnown RBP17.75■□□□□ 0.43
SNX18-202ENST00000343017 USHBP1Q8N6Y0 703 aa17.75■□□□□ 0.43
SNX18-202ENST00000343017 NCOA5Q9HCD5 579 aaKnown RBP17.75■□□□□ 0.43
SNX18-202ENST00000343017 KCND1Q9NSA2 647 aa17.75■□□□□ 0.43
SNX18-202ENST00000343017 CCDC191Q8NCU4 936 aa17.75■□□□□ 0.43
SNX18-202ENST00000343017 C9orf78Q9NZ63 289 aaPredicted RBP17.75■□□□□ 0.43
SNX18-202ENST00000343017 TBX22Q9Y458 520 aa17.75■□□□□ 0.43
SNX18-202ENST00000343017 TBC1D8O95759 1140 aa17.74■□□□□ 0.43
SNX18-202ENST00000343017 ATP1A3P13637 1013 aa17.74■□□□□ 0.43
SNX18-202ENST00000343017 NLRP6P59044 892 aa17.74■□□□□ 0.43
SNX18-202ENST00000343017 ARGLU1Q9NWB6 273 aaPredicted RBP17.74■□□□□ 0.43
SNX18-202ENST00000343017 EVCP57679 992 aa17.74■□□□□ 0.43
SNX18-202ENST00000343017 TPM4P67936 248 aa17.74■□□□□ 0.43
SNX18-202ENST00000343017 FAM193AP78312 1265 aa17.74■□□□□ 0.43
SNX18-202ENST00000343017 GNL2Q13823 731 aaKnown RBP17.74■□□□□ 0.43
SNX18-202ENST00000343017 TRIM65Q6PJ69 517 aa17.74■□□□□ 0.43
SNX18-202ENST00000343017 NEK1Q96PY6 1258 aa17.74■□□□□ 0.43
SNX18-202ENST00000343017 ZSCAN16Q9H4T2 348 aaPredicted RBP17.74■□□□□ 0.43
SNX18-202ENST00000343017 CEP170BQ9Y4F5 1589 aaPredicted RBP17.74■□□□□ 0.43
SNX18-202ENST00000343017 TADA3O75528 432 aa17.74■□□□□ 0.43
SNX18-202ENST00000343017 ZSCAN26Q16670 478 aa17.74■□□□□ 0.43
SNX18-202ENST00000343017 NRKQ7Z2Y5 1582 aa17.73■□□□□ 0.43
SNX18-202ENST00000343017 PSDA5PKW4 1024 aaPredicted RBP17.73■□□□□ 0.43
SNX18-202ENST00000343017 TAF5LO75529 589 aa17.73■□□□□ 0.43
SNX18-202ENST00000343017 NDUFA8P51970 172 aa17.73■□□□□ 0.43
SNX18-202ENST00000343017 SMC1AQ14683 1233 aaKnown RBP17.73■□□□□ 0.43
SNX18-202ENST00000343017 OTUD7BQ6GQQ9 843 aa17.73■□□□□ 0.43
SNX18-202ENST00000343017 CREBRFQ8IUR6 639 aa17.73■□□□□ 0.43
SNX18-202ENST00000343017 UTP14AQ9BVJ6 771 aaKnown RBP17.73■□□□□ 0.43
SNX18-202ENST00000343017 ANKLE2Q86XL3 938 aa17.73■□□□□ 0.43
SNX18-202ENST00000343017 PCDHA7Q9UN72 937 aa17.73■□□□□ 0.43
SNX18-202ENST00000343017 ADGRL3Q9HAR2 1447 aa17.73■□□□□ 0.43
SNX18-202ENST00000343017 CTDNEP1O95476 244 aa17.72■□□□□ 0.43
SNX18-202ENST00000343017 NAT10Q9H0A0 1025 aaKnown RBP17.72■□□□□ 0.43
SNX18-202ENST00000343017 TAOK2Q9UL54 1235 aa17.72■□□□□ 0.43
SNX18-202ENST00000343017 UBR1Q8IWV7 1749 aa17.72■□□□□ 0.43
SNX18-202ENST00000343017 TXLNBQ8N3L3 684 aa17.72■□□□□ 0.43
SNX18-202ENST00000343017 DPF2Q92785 391 aa17.72■□□□□ 0.43
SNX18-202ENST00000343017 IMPACTQ9P2X3 320 aa17.72■□□□□ 0.43
SNX18-202ENST00000343017 COL15A1P39059 1388 aa17.72■□□□□ 0.43
SNX18-202ENST00000343017 APOBRQ0VD83 1088 aa17.72■□□□□ 0.43
SNX18-202ENST00000343017 ILDR1Q86SU0 546 aaPredicted RBP17.72■□□□□ 0.43
SNX18-202ENST00000343017 CCDC150Q8NCX0 1101 aa17.72■□□□□ 0.43
SNX18-202ENST00000343017 CCDC9Q9Y3X0 531 aaKnown RBP17.72■□□□□ 0.43
SNX18-202ENST00000343017 MYO1CO00159 1063 aa17.71■□□□□ 0.43
SNX18-202ENST00000343017 REXO1L1PQ8IX06 675 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms