RNA–Protein interactions for RNA: ENST00000340650.5

NHLRC1-201, Transcript of NHL repeat containing E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 BASIC

Gene NHLRC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1-201ENST00000340650 COL15A1P39059 1388 aa23.34■■□□□ 1.33
NHLRC1-201ENST00000340650 KDM4AO75164 1064 aa23.34■■□□□ 1.33
NHLRC1-201ENST00000340650 F13A1P00488 732 aa23.34■■□□□ 1.33
NHLRC1-201ENST00000340650 SYT1P21579 422 aa23.34■■□□□ 1.33
NHLRC1-201ENST00000340650 RFX5P48382 616 aaPredicted RBP23.34■■□□□ 1.33
NHLRC1-201ENST00000340650 KCNQ4P56696 695 aa23.34■■□□□ 1.33
NHLRC1-201ENST00000340650 DZIP3Q86Y13 1208 aaKnown RBP23.34■■□□□ 1.33
NHLRC1-201ENST00000340650 CCDC94Q9BW85 323 aaPredicted RBP23.34■■□□□ 1.33
NHLRC1-201ENST00000340650 CCDC87Q9NVE4 849 aa23.34■■□□□ 1.33
NHLRC1-201ENST00000340650 AK2P54819 239 aa23.33■■□□□ 1.33
NHLRC1-201ENST00000340650 PTPN12Q05209 780 aaKnown RBP23.33■■□□□ 1.33
NHLRC1-201ENST00000340650 ATP6V1DQ9Y5K8 247 aa23.33■■□□□ 1.33
NHLRC1-201ENST00000340650 MAP4K4O95819 1239 aaPredicted RBP23.33■■□□□ 1.33
NHLRC1-201ENST00000340650 RUFY3Q7L099 469 aa23.33■■□□□ 1.33
NHLRC1-201ENST00000340650 SMARCC1Q92922 1105 aaPredicted RBP23.33■■□□□ 1.33
NHLRC1-201ENST00000340650 FAM89AQ96GI7 184 aa23.33■■□□□ 1.33
NHLRC1-201ENST00000340650 AACSQ86V21 672 aa23.32■■□□□ 1.32
NHLRC1-201ENST00000340650 TTC12Q9H892 705 aaPredicted RBP23.32■■□□□ 1.32
NHLRC1-201ENST00000340650 COPRSQ9NQ92 184 aa23.32■■□□□ 1.32
NHLRC1-201ENST00000340650 EP400Q96L91 3159 aa23.31■■□□□ 1.32
NHLRC1-201ENST00000340650 THSD7AQ9UPZ6 1657 aa23.31■■□□□ 1.32
NHLRC1-201ENST00000340650 IFIT2P09913 472 aaKnown RBP23.31■■□□□ 1.32
NHLRC1-201ENST00000340650 EIF5P55010 431 aaKnown RBP23.31■■□□□ 1.32
NHLRC1-201ENST00000340650 TRIM28Q13263 835 aaKnown RBP23.31■■□□□ 1.32
NHLRC1-201ENST00000340650 SMC3Q9UQE7 1217 aa23.31■■□□□ 1.32
NHLRC1-201ENST00000340650 RASEFQ8IZ41 740 aa23.3■■□□□ 1.32
NHLRC1-201ENST00000340650 SYNE4Q8N205 404 aa23.3■■□□□ 1.32
NHLRC1-201ENST00000340650 MPNDQ8N594 471 aa23.3■■□□□ 1.32
NHLRC1-201ENST00000340650 EAF2Q96CJ1 260 aaPredicted RBP23.3■■□□□ 1.32
NHLRC1-201ENST00000340650 CNTROBQ8N137 903 aa23.29■■□□□ 1.32
NHLRC1-201ENST00000340650 ZNF710Q8N1W2 664 aa23.29■■□□□ 1.32
NHLRC1-201ENST00000340650 TRPC5Q9UL62 973 aaPredicted RBP23.29■■□□□ 1.32
NHLRC1-201ENST00000340650 NLRP10Q86W26 655 aa23.29■■□□□ 1.32
NHLRC1-201ENST00000340650 CCDC8Q9H0W5 538 aaPredicted RBP23.29■■□□□ 1.32
NHLRC1-201ENST00000340650 CCDC85AQ96PX6 553 aaPredicted RBP23.28■■□□□ 1.32
NHLRC1-201ENST00000340650 TLR7Q9NYK1 1049 aaKnown RBP23.28■■□□□ 1.32
NHLRC1-201ENST00000340650 USP42Q9H9J4 1324 aaKnown RBP23.28■■□□□ 1.32
NHLRC1-201ENST00000340650 FIBPO43427 364 aa23.27■■□□□ 1.32
NHLRC1-201ENST00000340650 PCCAP05165 728 aaPredicted RBP23.27■■□□□ 1.32
NHLRC1-201ENST00000340650 HSP90AB3PQ58FF7 597 aa23.27■■□□□ 1.32
NHLRC1-201ENST00000340650 ZBTB38Q8NAP3 1195 aaPredicted RBP23.27■■□□□ 1.32
NHLRC1-201ENST00000340650 ATRNO75882 1429 aa23.27■■□□□ 1.32
NHLRC1-201ENST00000340650 ERVV-1B6SEH8 477 aa23.27■■□□□ 1.31
NHLRC1-201ENST00000340650 TPM3P06753 285 aa23.27■■□□□ 1.31
NHLRC1-201ENST00000340650 SEPT12Q8IYM1 358 aa23.27■■□□□ 1.31
NHLRC1-201ENST00000340650 C17orf53Q8N3J3 647 aaPredicted RBP23.27■■□□□ 1.31
NHLRC1-201ENST00000340650 LINC00116Q8NCU8 138 aa23.27■■□□□ 1.31
NHLRC1-201ENST00000340650 TFCP2Q12800 502 aa23.26■■□□□ 1.31
NHLRC1-201ENST00000340650 ZNF594Q96JF6 807 aaPredicted RBP23.26■■□□□ 1.31
NHLRC1-201ENST00000340650 MYH14Q7Z406 1995 aaKnown RBP23.25■■□□□ 1.31
NHLRC1-201ENST00000340650 QTRT2Q9H974 415 aaKnown RBP23.25■■□□□ 1.31
NHLRC1-201ENST00000340650 ECHDC1Q9NTX5 307 aa23.25■■□□□ 1.31
NHLRC1-201ENST00000340650 MTMR6Q9Y217 621 aa23.25■■□□□ 1.31
NHLRC1-201ENST00000340650 TTC41PQ6P2S7 1318 aa23.25■■□□□ 1.31
NHLRC1-201ENST00000340650 GIMAP6Q6P9H5 292 aa23.25■■□□□ 1.31
NHLRC1-201ENST00000340650 KIAA1524Q8TCG1 905 aa23.25■■□□□ 1.31
NHLRC1-201ENST00000340650 UBN2Q6ZU65 1347 aa23.25■■□□□ 1.31
NHLRC1-201ENST00000340650 LARGE1O95461 756 aa23.24■■□□□ 1.31
NHLRC1-201ENST00000340650 ZSCAN31Q96LW9 406 aaPredicted RBP23.24■■□□□ 1.31
NHLRC1-201ENST00000340650 KIF3AQ9Y496 699 aa23.24■■□□□ 1.31
NHLRC1-201ENST00000340650 AP5Z1O43299 807 aa23.24■■□□□ 1.31
NHLRC1-201ENST00000340650 VPS53Q5VIR6 699 aa23.24■■□□□ 1.31
NHLRC1-201ENST00000340650 GPATCH3Q96I76 525 aa23.24■■□□□ 1.31
NHLRC1-201ENST00000340650 ARID3AQ99856 593 aa23.24■■□□□ 1.31
NHLRC1-201ENST00000340650 TRMT112Q9UI30 125 aaKnown RBP23.24■■□□□ 1.31
NHLRC1-201ENST00000340650 GLRX3O76003 335 aaKnown RBP23.23■■□□□ 1.31
NHLRC1-201ENST00000340650 CASTP20810 708 aaKnown RBP23.23■■□□□ 1.31
NHLRC1-201ENST00000340650 GJB2P29033 226 aa23.23■■□□□ 1.31
NHLRC1-201ENST00000340650 KCNB2Q92953 911 aa23.23■■□□□ 1.31
NHLRC1-201ENST00000340650 LARP6Q9BRS8 491 aaKnown RBP23.23■■□□□ 1.31
NHLRC1-201ENST00000340650 TM6SF1Q9BZW5 370 aa23.23■■□□□ 1.31
NHLRC1-201ENST00000340650 SH2B1Q9NRF2 756 aaPredicted RBP23.23■■□□□ 1.31
NHLRC1-201ENST00000340650 DNM1Q05193 864 aaKnown RBP23.23■■□□□ 1.31
NHLRC1-201ENST00000340650 NUP98P52948 1817 aa23.22■■□□□ 1.31
NHLRC1-201ENST00000340650 FAM177BA6PVY3 158 aa23.22■■□□□ 1.31
NHLRC1-201ENST00000340650 ONECUT3O60422 494 aaPredicted RBP23.22■■□□□ 1.31
NHLRC1-201ENST00000340650 SMIM5Q71RC9 77 aa23.22■■□□□ 1.31
NHLRC1-201ENST00000340650 TSC1Q92574 1164 aa23.22■■□□□ 1.31
NHLRC1-201ENST00000340650 KCNF1Q9H3M0 494 aa23.22■■□□□ 1.31
NHLRC1-201ENST00000340650 CAMTA2O94983 1202 aa23.21■■□□□ 1.31
NHLRC1-201ENST00000340650 LRRC24Q50LG9 513 aa23.21■■□□□ 1.31
NHLRC1-201ENST00000340650 CWC27Q6UX04 472 aaKnown RBP23.21■■□□□ 1.31
NHLRC1-201ENST00000340650 ZNF34Q8IZ26 560 aa23.21■■□□□ 1.31
NHLRC1-201ENST00000340650 TNNI3KQ59H18 835 aa23.21■■□□□ 1.31
NHLRC1-201ENST00000340650 ATG9AQ7Z3C6 839 aa23.21■■□□□ 1.31
NHLRC1-201ENST00000340650 CCDC83Q8IWF9 413 aa23.21■■□□□ 1.31
NHLRC1-201ENST00000340650 FPGT-TNNI3KV9GXZ4 949 aa23.21■■□□□ 1.31
NHLRC1-201ENST00000340650 CCDC57Q2TAC2 916 aa23.2■■□□□ 1.3
NHLRC1-201ENST00000340650 RUFY2Q8WXA3 655 aa23.2■■□□□ 1.3
NHLRC1-201ENST00000340650 ZSWIM6Q9HCJ5 1215 aa23.2■■□□□ 1.3
NHLRC1-201ENST00000340650 PDRG1Q9NUG6 133 aa23.2■■□□□ 1.3
NHLRC1-201ENST00000340650 BTAF1O14981 1849 aa23.2■■□□□ 1.3
NHLRC1-201ENST00000340650 CPA1P15085 419 aa23.2■■□□□ 1.3
NHLRC1-201ENST00000340650 UTP14CQ5TAP6 766 aaKnown RBP23.2■■□□□ 1.3
NHLRC1-201ENST00000340650 PUS3Q9BZE2 481 aaKnown RBP23.2■■□□□ 1.3
NHLRC1-201ENST00000340650 CICQ96RK0 1608 aaPredicted RBP23.2■■□□□ 1.3
NHLRC1-201ENST00000340650 ANKRD36CQ5JPF3 1778 aa23.19■■□□□ 1.3
NHLRC1-201ENST00000340650 RREB1Q92766 1687 aa23.19■■□□□ 1.3
NHLRC1-201ENST00000340650 IRS4O14654 1257 aaPredicted RBP23.19■■□□□ 1.3
NHLRC1-201ENST00000340650 CCDC192P0DO97 292 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms