RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 STX1AQ16623 288 aa12.93□□□□□ -0.34
SEMA4D-201ENST00000339861 ABCF2Q9UG63 623 aa12.93□□□□□ -0.34
SEMA4D-201ENST00000339861 CTNNA3Q9UI47 895 aa12.93□□□□□ -0.34
SEMA4D-201ENST00000339861 IQSEC3Q9UPP2 1182 aaPredicted RBP12.93□□□□□ -0.34
SEMA4D-201ENST00000339861 SLC3A2P08195 630 aaKnown RBP12.92□□□□□ -0.34
SEMA4D-201ENST00000339861 LDHAL6AQ6ZMR3 332 aa12.92□□□□□ -0.34
SEMA4D-201ENST00000339861 SHPRHQ149N8 1683 aa12.92□□□□□ -0.34
SEMA4D-201ENST00000339861 IFIT5Q13325 482 aaKnown RBP12.92□□□□□ -0.34
SEMA4D-201ENST00000339861 PIK3C2BO00750 1634 aa12.92□□□□□ -0.34
SEMA4D-201ENST00000339861 VWDEQ8N2E2 1590 aa12.92□□□□□ -0.34
SEMA4D-201ENST00000339861 MROH1Q8NDA8 1641 aa12.92□□□□□ -0.34
SEMA4D-201ENST00000339861 NEURL1BA8MQ27 555 aa12.92□□□□□ -0.34
SEMA4D-201ENST00000339861 CLEC17AQ6ZS10 378 aa12.92□□□□□ -0.34
SEMA4D-201ENST00000339861 SIRT1Q96EB6 747 aa12.92□□□□□ -0.34
SEMA4D-201ENST00000339861 U2AF2P26368 475 aaKnown RBP eCLIP12.91□□□□□ -0.34
SEMA4D-201ENST00000339861 CEP135Q66GS9 1140 aa12.91□□□□□ -0.34
SEMA4D-201ENST00000339861 AIDAQ96BJ3 306 aa12.91□□□□□ -0.34
SEMA4D-201ENST00000339861 CCDC34Q96HJ3 373 aa12.91□□□□□ -0.34
SEMA4D-201ENST00000339861 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.91□□□□□ -0.34
SEMA4D-201ENST00000339861 CRB1P82279 1406 aa12.91□□□□□ -0.34
SEMA4D-201ENST00000339861 TDO2P48775 406 aa12.91□□□□□ -0.34
SEMA4D-201ENST00000339861 DHX32Q7L7V1 743 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-201ENST00000339861 FAM89AQ96GI7 184 aa12.91□□□□□ -0.34
SEMA4D-201ENST00000339861 DBNLQ9UJU6 430 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-201ENST00000339861 MINDY4BA8MYZ0 360 aa12.91□□□□□ -0.34
SEMA4D-201ENST00000339861 HMGB1P09429 215 aaKnown RBP12.91□□□□□ -0.34
SEMA4D-201ENST00000339861 POLA2Q14181 598 aa12.91□□□□□ -0.34
SEMA4D-201ENST00000339861 EPHA10Q5JZY3 1008 aa12.91□□□□□ -0.34
SEMA4D-201ENST00000339861 METTL22Q9BUU2 404 aaPredicted RBP12.91□□□□□ -0.34
SEMA4D-201ENST00000339861 ZSCAN16Q9H4T2 348 aaPredicted RBP12.91□□□□□ -0.34
SEMA4D-201ENST00000339861 TAF6LQ9Y6J9 622 aa12.91□□□□□ -0.34
SEMA4D-201ENST00000339861 CFAP74Q9C0B2 1584 aa12.91□□□□□ -0.34
SEMA4D-201ENST00000339861 CCDC69A6NI79 296 aa12.91□□□□□ -0.34
SEMA4D-201ENST00000339861 SLC4A8Q2Y0W8 1093 aa12.9□□□□□ -0.34
SEMA4D-201ENST00000339861 MYRIPQ8NFW9 859 aa12.9□□□□□ -0.34
SEMA4D-201ENST00000339861 MAP2P11137 1827 aaKnown RBP12.9□□□□□ -0.34
SEMA4D-201ENST00000339861 CPLX3Q8WVH0 158 aa12.9□□□□□ -0.34
SEMA4D-201ENST00000339861 MAP4K1Q92918 833 aa12.9□□□□□ -0.34
SEMA4D-201ENST00000339861 PDLIM2Q96JY6 352 aa12.9□□□□□ -0.34
SEMA4D-201ENST00000339861 URI1O94763 535 aaPredicted RBP12.9□□□□□ -0.34
SEMA4D-201ENST00000339861 MPHOSPH8Q99549 860 aa12.9□□□□□ -0.34
SEMA4D-201ENST00000339861 SSH2Q76I76 1423 aa12.89□□□□□ -0.35
SEMA4D-201ENST00000339861 A0A1B0GUL7 405 aa12.89□□□□□ -0.35
SEMA4D-201ENST00000339861 PRC1O43663 620 aa12.89□□□□□ -0.35
SEMA4D-201ENST00000339861 MAPK8IP2Q13387 824 aaPredicted RBP12.89□□□□□ -0.35
SEMA4D-201ENST00000339861 A0A0U1RQG5 324 aaPredicted RBP12.89□□□□□ -0.35
SEMA4D-201ENST00000339861 KIF18AQ8NI77 898 aa12.89□□□□□ -0.35
SEMA4D-201ENST00000339861 BCL2L12Q9HB09 334 aa12.89□□□□□ -0.35
SEMA4D-201ENST00000339861 ZSWIM4Q9H7M6 989 aa12.89□□□□□ -0.35
SEMA4D-201ENST00000339861 TRMT112Q9UI30 125 aaKnown RBP12.89□□□□□ -0.35
SEMA4D-201ENST00000339861 DEPDC5O75140 1603 aa12.89□□□□□ -0.35
SEMA4D-201ENST00000339861 TAF5LO75529 589 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 HOXB7P09629 217 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 PTPN21Q16825 1174 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 SKIDA1Q1XH10 827 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 TTLL7Q6ZT98 887 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 JMYQ8N9B5 988 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 MRPS27Q92552 414 aaKnown RBP12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 USP28Q96RU2 1077 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 CYP21A2P08686 494 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 TTC14Q96N46 770 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 TRERF1Q96PN7 1200 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 TM6SF1Q9BZW5 370 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 CLSTN2Q9H4D0 955 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 BABAM1Q9NWV8 329 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 IFNKQ9P0W0 207 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 PPLO60437 1756 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 IFIT3O14879 490 aaKnown RBP12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 ZNF75DP51815 510 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 NECTIN1Q15223 517 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 SPECC1Q5M775 1068 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 SLC9C2Q5TAH2 1124 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 PCMTD1Q96MG8 357 aaPredicted RBP12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 MYL10Q9BUA6 226 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 LRP2BPQ9P2M1 347 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 HOOK1Q9UJC3 728 aaKnown RBP12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 MRVI1Q9Y6F6 885 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 PDIA4P13667 645 aaKnown RBP12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 LRRC24Q50LG9 513 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 SLC26A6Q9BXS9 759 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 NAPBQ9H115 298 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 SLC52A2Q9HAB3 445 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 GPHNQ9NQX3 736 aaPredicted RBP12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 TMOD3Q9NYL9 352 aa12.88□□□□□ -0.35
SEMA4D-201ENST00000339861 FRMPD1Q5SYB0 1578 aa12.87□□□□□ -0.35
SEMA4D-201ENST00000339861 SART3Q15020 963 aaKnown RBP12.87□□□□□ -0.35
SEMA4D-201ENST00000339861 BICDL1Q6ZP65 573 aa12.87□□□□□ -0.35
SEMA4D-201ENST00000339861 CTAGE5O15320 804 aa12.87□□□□□ -0.35
SEMA4D-201ENST00000339861 METAP2P50579 478 aaKnown RBP eCLIP12.87□□□□□ -0.35
SEMA4D-201ENST00000339861 TRIM22Q8IYM9 498 aa12.87□□□□□ -0.35
SEMA4D-201ENST00000339861 CNNM3Q8NE01 707 aa12.87□□□□□ -0.35
SEMA4D-201ENST00000339861 GTF3C6Q969F1 213 aa12.87□□□□□ -0.35
SEMA4D-201ENST00000339861 AXIN2Q9Y2T1 843 aa12.87□□□□□ -0.35
SEMA4D-201ENST00000339861 DIP2CQ9Y2E4 1556 aa12.87□□□□□ -0.35
SEMA4D-201ENST00000339861 GOLGA8AA7E2F4 631 aa12.87□□□□□ -0.35
SEMA4D-201ENST00000339861 ZKSCAN3Q9BRR0 538 aa12.87□□□□□ -0.35
SEMA4D-201ENST00000339861 ALG1Q9BT22 464 aa12.87□□□□□ -0.35
SEMA4D-201ENST00000339861 SCRN1Q12765 414 aa12.86□□□□□ -0.35
SEMA4D-201ENST00000339861 SNW1Q13573 536 aaKnown RBP12.86□□□□□ -0.35
SEMA4D-201ENST00000339861 NCOA7Q8NI08 942 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms