RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 EDC3Q96F86 508 aaKnown RBP23.57■■□□□ 1.36
UBC-201ENST00000339647 SLC26A8Q96RN1 970 aa23.57■■□□□ 1.36
UBC-201ENST00000339647 USP28Q96RU2 1077 aa23.57■■□□□ 1.36
UBC-201ENST00000339647 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.57■■□□□ 1.36
UBC-201ENST00000339647 MED23Q9ULK4 1368 aa23.57■■□□□ 1.36
UBC-201ENST00000339647 TMC6Q7Z403 805 aa23.56■■□□□ 1.36
UBC-201ENST00000339647 BABAM1Q9NWV8 329 aa23.56■■□□□ 1.36
UBC-201ENST00000339647 TECPR2O15040 1411 aa23.56■■□□□ 1.36
UBC-201ENST00000339647 PPFIA3O75145 1194 aa23.56■■□□□ 1.36
UBC-201ENST00000339647 LTKP29376 864 aa23.56■■□□□ 1.36
UBC-201ENST00000339647 EIF4A1P60842 406 aaKnown RBP23.56■■□□□ 1.36
UBC-201ENST00000339647 SCRN1Q12765 414 aa23.56■■□□□ 1.36
UBC-201ENST00000339647 POLR3GO15318 223 aaPredicted RBP23.56■■□□□ 1.36
UBC-201ENST00000339647 TAF5LO75529 589 aa23.56■■□□□ 1.36
UBC-201ENST00000339647 TSGA10IPQ3SY00 556 aa23.56■■□□□ 1.36
UBC-201ENST00000339647 CREBRFQ8IUR6 639 aa23.56■■□□□ 1.36
UBC-201ENST00000339647 FSIP1Q8NA03 581 aa23.56■■□□□ 1.36
UBC-201ENST00000339647 XPO4Q9C0E2 1151 aaKnown RBP23.56■■□□□ 1.36
UBC-201ENST00000339647 USHBP1Q8N6Y0 703 aa23.55■■□□□ 1.36
UBC-201ENST00000339647 NEK1Q96PY6 1258 aa23.55■■□□□ 1.36
UBC-201ENST00000339647 HMG20BQ9P0W2 317 aa23.55■■□□□ 1.36
UBC-201ENST00000339647 SMC2O95347 1197 aa23.55■■□□□ 1.36
UBC-201ENST00000339647 FAM160A1Q05DH4 1040 aa23.55■■□□□ 1.36
UBC-201ENST00000339647 CWF19L2Q2TBE0 894 aaKnown RBP23.55■■□□□ 1.36
UBC-201ENST00000339647 DNAJC2Q99543 621 aaKnown RBP23.55■■□□□ 1.36
UBC-201ENST00000339647 IFNKQ9P0W0 207 aa23.55■■□□□ 1.36
UBC-201ENST00000339647 NUTM2GQ5VZR2 741 aa23.54■■□□□ 1.36
UBC-201ENST00000339647 SIL1Q9H173 461 aa23.54■■□□□ 1.36
UBC-201ENST00000339647 IMPACTQ9P2X3 320 aa23.54■■□□□ 1.36
UBC-201ENST00000339647 ZRANB2O95218 330 aaKnown RBP eCLIP23.53■■□□□ 1.366e-9■■■■□ 20.1
UBC-201ENST00000339647 ME1P48163 572 aa23.53■■□□□ 1.36
UBC-201ENST00000339647 MAP3K2Q9Y2U5 619 aa23.53■■□□□ 1.36
UBC-201ENST00000339647 CHGBP05060 677 aa23.53■■□□□ 1.36
UBC-201ENST00000339647 NEK11Q8NG66 645 aa23.53■■□□□ 1.36
UBC-201ENST00000339647 LGR6Q9HBX8 967 aa23.53■■□□□ 1.36
UBC-201ENST00000339647 COL15A1P39059 1388 aa23.53■■□□□ 1.36
UBC-201ENST00000339647 PSDA5PKW4 1024 aaPredicted RBP23.52■■□□□ 1.36
UBC-201ENST00000339647 HOMER1Q86YM7 354 aa23.52■■□□□ 1.36
UBC-201ENST00000339647 SEC31AO94979 1220 aaKnown RBP23.52■■□□□ 1.36
UBC-201ENST00000339647 SFPQP23246 707 aaKnown RBP eCLIP23.52■■□□□ 1.36
UBC-201ENST00000339647 GUCY1B3Q02153 619 aa23.52■■□□□ 1.36
UBC-201ENST00000339647 G3BP1Q13283 466 aaKnown RBP eCLIP23.52■■□□□ 1.362e-7■■■■□ 21.1
UBC-201ENST00000339647 DPCR1Q3MIW9 517 aa23.52■■□□□ 1.36
UBC-201ENST00000339647 NAT10Q9H0A0 1025 aaKnown RBP23.52■■□□□ 1.36
UBC-201ENST00000339647 ORC3Q9UBD5 711 aaPredicted RBP23.52■■□□□ 1.36
UBC-201ENST00000339647 DNAI1Q9UI46 699 aa23.52■■□□□ 1.36
UBC-201ENST00000339647 TNRQ92752 1358 aa23.51■■□□□ 1.35
UBC-201ENST00000339647 PLCD3Q8N3E9 789 aa23.51■■□□□ 1.35
UBC-201ENST00000339647 SMARCC2Q8TAQ2 1214 aa23.51■■□□□ 1.35
UBC-201ENST00000339647 FMNL2Q96PY5 1086 aa23.51■■□□□ 1.35
UBC-201ENST00000339647 SLC20A2Q08357 652 aa23.51■■□□□ 1.35
UBC-201ENST00000339647 TMCO3Q6UWJ1 677 aa23.51■■□□□ 1.35
UBC-201ENST00000339647 CCDC129Q6ZRS4 1044 aa23.51■■□□□ 1.35
UBC-201ENST00000339647 IPO4Q8TEX9 1081 aaKnown RBP23.51■■□□□ 1.35
UBC-201ENST00000339647 SDF4Q9BRK5 362 aa23.51■■□□□ 1.35
UBC-201ENST00000339647 USPL1Q5W0Q7 1092 aa23.5■■□□□ 1.35
UBC-201ENST00000339647 CCDC150Q8NCX0 1101 aa23.5■■□□□ 1.35
UBC-201ENST00000339647 NSUN7Q8NE18 718 aaKnown RBP23.5■■□□□ 1.35
UBC-201ENST00000339647 UBXN4Q92575 508 aa23.5■■□□□ 1.35
UBC-201ENST00000339647 SEC62Q99442 399 aaKnown RBP23.5■■□□□ 1.35
UBC-201ENST00000339647 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.5■■□□□ 1.35
UBC-201ENST00000339647 A0A1B0GVL5 298 aa23.5■■□□□ 1.35
UBC-201ENST00000339647 CTDNEP1O95476 244 aa23.5■■□□□ 1.35
UBC-201ENST00000339647 KRT32Q14532 448 aa23.5■■□□□ 1.35
UBC-201ENST00000339647 KLHDC4Q8TBB5 520 aa23.5■■□□□ 1.35
UBC-201ENST00000339647 SUCLG2Q96I99 432 aa23.5■■□□□ 1.35
UBC-201ENST00000339647 NDUFB9Q9Y6M9 179 aa23.5■■□□□ 1.35
UBC-201ENST00000339647 JCADQ9P266 1359 aa23.5■■□□□ 1.35
UBC-201ENST00000339647 HOXC9P31274 260 aa23.49■■□□□ 1.35
UBC-201ENST00000339647 KAZALD1Q96I82 304 aa23.49■■□□□ 1.35
UBC-201ENST00000339647 RAD51AP2Q09MP3 1159 aa23.49■■□□□ 1.35
UBC-201ENST00000339647 EPC1Q9H2F5 836 aa23.49■■□□□ 1.35
UBC-201ENST00000339647 ZCCHC17Q9NP64 241 aaKnown RBP23.49■■□□□ 1.35
UBC-201ENST00000339647 FANCGO15287 622 aa23.48■■□□□ 1.35
UBC-201ENST00000339647 ETF1P62495 437 aaKnown RBP23.48■■□□□ 1.35
UBC-201ENST00000339647 ST5P78524 1137 aa23.48■■□□□ 1.35
UBC-201ENST00000339647 NAA16Q6N069 864 aaPredicted RBP23.48■■□□□ 1.35
UBC-201ENST00000339647 FMR1NBQ8N0W7 255 aaPredicted RBP23.48■■□□□ 1.35
UBC-201ENST00000339647 TRIM34Q9BYJ4 488 aa23.48■■□□□ 1.35
UBC-201ENST00000339647 BICC1Q9H694 974 aaKnown RBP23.48■■□□□ 1.35
UBC-201ENST00000339647 TOPAZ1Q8N9V7 1692 aa23.48■■□□□ 1.35
UBC-201ENST00000339647 BIN1O00499 593 aa23.48■■□□□ 1.35
UBC-201ENST00000339647 ALDH1L1O75891 902 aa23.48■■□□□ 1.35
UBC-201ENST00000339647 CYP21A2P08686 494 aa23.48■■□□□ 1.35
UBC-201ENST00000339647 PROSER3Q2NL68 480 aa23.48■■□□□ 1.35
UBC-201ENST00000339647 ILDR1Q86SU0 546 aaPredicted RBP23.48■■□□□ 1.35
UBC-201ENST00000339647 PCDHA7Q9UN72 937 aa23.48■■□□□ 1.35
UBC-201ENST00000339647 PTPDC1A2A3K4 754 aa23.47■■□□□ 1.35
UBC-201ENST00000339647 CCT2P78371 535 aaKnown RBP23.47■■□□□ 1.35
UBC-201ENST00000339647 FEZ2Q9UHY8 353 aaPredicted RBP23.47■■□□□ 1.35
UBC-201ENST00000339647 ARGLU1Q9NWB6 273 aaPredicted RBP23.47■■□□□ 1.35
UBC-201ENST00000339647 NLRP6P59044 892 aa23.46■■□□□ 1.35
UBC-201ENST00000339647 NGDNQ8NEJ9 315 aaKnown RBP23.46■■□□□ 1.35
UBC-201ENST00000339647 ZNF396Q96N95 335 aaPredicted RBP23.46■■□□□ 1.35
UBC-201ENST00000339647 PFKFB2O60825 505 aa23.46■■□□□ 1.35
UBC-201ENST00000339647 NDUFA8P51970 172 aa23.46■■□□□ 1.35
UBC-201ENST00000339647 TEX35Q5T0J7 233 aa23.46■■□□□ 1.35
UBC-201ENST00000339647 CARD6Q9BX69 1037 aa23.46■■□□□ 1.35
UBC-201ENST00000339647 NCOA5Q9HCD5 579 aaKnown RBP23.46■■□□□ 1.35
UBC-201ENST00000339647 NWD1Q149M9 1564 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms