RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 LARP1BQ659C4 914 aaKnown RBP10.8□□□□□ -0.68
RPGR-202ENST00000339363 GBP6Q6ZN66 633 aa10.8□□□□□ -0.68
RPGR-202ENST00000339363 RBM33Q96EV2 1170 aaKnown RBP10.8□□□□□ -0.68
RPGR-202ENST00000339363 MTMR6Q9Y217 621 aa10.8□□□□□ -0.68
RPGR-202ENST00000339363 RAD50Q92878 1312 aa10.8□□□□□ -0.68
RPGR-202ENST00000339363 XRN1Q8IZH2 1706 aaKnown RBP10.8□□□□□ -0.68
RPGR-202ENST00000339363 GJB2P29033 226 aa10.79□□□□□ -0.68
RPGR-202ENST00000339363 CDC37L1Q7L3B6 337 aa10.79□□□□□ -0.68
RPGR-202ENST00000339363 MON2Q7Z3U7 1717 aa10.79□□□□□ -0.68
RPGR-202ENST00000339363 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.79□□□□□ -0.68
RPGR-202ENST00000339363 EDC3Q96F86 508 aaKnown RBP10.79□□□□□ -0.68
RPGR-202ENST00000339363 FAM227BQ96M60 508 aa10.79□□□□□ -0.68
RPGR-202ENST00000339363 ACBD3Q9H3P7 528 aa10.79□□□□□ -0.68
RPGR-202ENST00000339363 CENPHQ9H3R5 247 aa10.79□□□□□ -0.68
RPGR-202ENST00000339363 OVOS2A0A0J9YW53 1432 aa10.79□□□□□ -0.68
RPGR-202ENST00000339363 OVOS2Q6IE36 1432 aa10.79□□□□□ -0.68
RPGR-202ENST00000339363 SARNPP82979 210 aaKnown RBP10.79□□□□□ -0.68
RPGR-202ENST00000339363 TTC6Q86TZ1 520 aa10.79□□□□□ -0.68
RPGR-202ENST00000339363 LGR6Q9HBX8 967 aa10.79□□□□□ -0.68
RPGR-202ENST00000339363 MRVI1Q9Y6F6 885 aa10.79□□□□□ -0.68
RPGR-202ENST00000339363 RGPD1P0DJD0 1748 aa10.79□□□□□ -0.68
RPGR-202ENST00000339363 NEBLO76041 1014 aa10.79□□□□□ -0.68
RPGR-202ENST00000339363 BIRC2Q13490 618 aa10.79□□□□□ -0.68
RPGR-202ENST00000339363 PRPF40BQ6NWY9 871 aaKnown RBP10.79□□□□□ -0.68
RPGR-202ENST00000339363 TMED8Q6PL24 325 aaPredicted RBP10.79□□□□□ -0.68
RPGR-202ENST00000339363 MMS22LQ6ZRQ5 1243 aa10.79□□□□□ -0.68
RPGR-202ENST00000339363 KLHDC4Q8TBB5 520 aa10.79□□□□□ -0.68
RPGR-202ENST00000339363 TLR7Q9NYK1 1049 aaKnown RBP10.79□□□□□ -0.68
RPGR-202ENST00000339363 GOLGB1Q14789 3259 aaKnown RBP10.79□□□□□ -0.68
RPGR-202ENST00000339363 NRKQ7Z2Y5 1582 aa10.78□□□□□ -0.68
RPGR-202ENST00000339363 LIG3P49916 1009 aa10.78□□□□□ -0.68
RPGR-202ENST00000339363 PLPPR3Q6T4P5 718 aa10.78□□□□□ -0.68
RPGR-202ENST00000339363 TMC6Q7Z403 805 aa10.78□□□□□ -0.68
RPGR-202ENST00000339363 RHPN1Q8TCX5 695 aa10.78□□□□□ -0.68
RPGR-202ENST00000339363 ERCC4Q92889 916 aaPredicted RBP10.78□□□□□ -0.68
RPGR-202ENST00000339363 RAI14Q9P0K7 980 aa10.78□□□□□ -0.68
RPGR-202ENST00000339363 TAOK2Q9UL54 1235 aa10.78□□□□□ -0.68
RPGR-202ENST00000339363 TPCN1Q9ULQ1 816 aa10.78□□□□□ -0.68
RPGR-202ENST00000339363 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.78□□□□□ -0.68
RPGR-202ENST00000339363 SRGAP3O43295 1099 aa10.78□□□□□ -0.68
RPGR-202ENST00000339363 HSP90B1P14625 803 aaKnown RBP10.78□□□□□ -0.68
RPGR-202ENST00000339363 CCT4P50991 539 aaKnown RBP10.78□□□□□ -0.68
RPGR-202ENST00000339363 PROSER3Q2NL68 480 aa10.78□□□□□ -0.68
RPGR-202ENST00000339363 EXOC4Q96A65 974 aa10.78□□□□□ -0.68
RPGR-202ENST00000339363 DDX11Q96FC9 970 aa10.78□□□□□ -0.68
RPGR-202ENST00000339363 DONSONQ9NYP3 566 aa10.78□□□□□ -0.68
RPGR-202ENST00000339363 FTOQ9C0B1 505 aaKnown RBP eCLIP10.78□□□□□ -0.68
RPGR-202ENST00000339363 ERLIN2O94905 339 aa10.77□□□□□ -0.69
RPGR-202ENST00000339363 LTKP29376 864 aa10.77□□□□□ -0.69
RPGR-202ENST00000339363 FOSBP53539 338 aa10.77□□□□□ -0.69
RPGR-202ENST00000339363 ZBTB12Q9Y330 459 aaPredicted RBP10.77□□□□□ -0.69
RPGR-202ENST00000339363 H2AFXP16104 143 aaPredicted RBP10.77□□□□□ -0.69
RPGR-202ENST00000339363 SSH3Q8TE77 659 aa10.77□□□□□ -0.69
RPGR-202ENST00000339363 CARD10Q9BWT7 1032 aa10.77□□□□□ -0.69
RPGR-202ENST00000339363 GSDMDP57764 484 aa10.76□□□□□ -0.69
RPGR-202ENST00000339363 JAKMIP3Q5VZ66 844 aa10.76□□□□□ -0.69
RPGR-202ENST00000339363 LRRN4CLQ8ND94 238 aa10.76□□□□□ -0.69
RPGR-202ENST00000339363 SLC24A3Q9HC58 644 aa10.76□□□□□ -0.69
RPGR-202ENST00000339363 DDX19AQ9NUU7 478 aaKnown RBP10.76□□□□□ -0.69
RPGR-202ENST00000339363 CHPF2Q9P2E5 772 aa10.76□□□□□ -0.69
RPGR-202ENST00000339363 ORC3Q9UBD5 711 aaPredicted RBP10.76□□□□□ -0.69
RPGR-202ENST00000339363 KIF1CO43896 1103 aaKnown RBP10.76□□□□□ -0.69
RPGR-202ENST00000339363 TAF7Q15545 349 aaPredicted RBP10.76□□□□□ -0.69
RPGR-202ENST00000339363 JAKMIP1Q96N16 626 aaKnown RBP10.76□□□□□ -0.69
RPGR-202ENST00000339363 RABEP2Q9H5N1 569 aa10.76□□□□□ -0.69
RPGR-202ENST00000339363 ELP1O95163 1332 aa10.76□□□□□ -0.69
RPGR-202ENST00000339363 PI4KAP2A4QPH2 592 aa10.76□□□□□ -0.69
RPGR-202ENST00000339363 H3BQV1 296 aa10.76□□□□□ -0.69
RPGR-202ENST00000339363 ERLIN1O75477 346 aa10.76□□□□□ -0.69
RPGR-202ENST00000339363 STK3Q13188 491 aa10.76□□□□□ -0.69
RPGR-202ENST00000339363 IFFO2Q5TF58 517 aa10.76□□□□□ -0.69
RPGR-202ENST00000339363 PI4KAP1Q8N8J0 262 aa10.76□□□□□ -0.69
RPGR-202ENST00000339363 TMEM87AQ8NBN3 555 aa10.76□□□□□ -0.69
RPGR-202ENST00000339363 SDF4Q9BRK5 362 aa10.76□□□□□ -0.69
RPGR-202ENST00000339363 A0A0G2JLW4 131 aa10.75□□□□□ -0.69
RPGR-202ENST00000339363 CCP110O43303 1012 aa10.75□□□□□ -0.69
RPGR-202ENST00000339363 UBTFL1P0CB47 393 aaPredicted RBP10.75□□□□□ -0.69
RPGR-202ENST00000339363 NF2P35240 595 aa10.75□□□□□ -0.69
RPGR-202ENST00000339363 ANAPC15P60006 121 aa10.75□□□□□ -0.69
RPGR-202ENST00000339363 GNG11P61952 73 aa10.75□□□□□ -0.69
RPGR-202ENST00000339363 CWF19L2Q2TBE0 894 aaKnown RBP10.75□□□□□ -0.69
RPGR-202ENST00000339363 CCDC30Q5VVM6 783 aa10.75□□□□□ -0.69
RPGR-202ENST00000339363 CCDC73Q6ZRK6 1079 aa10.75□□□□□ -0.69
RPGR-202ENST00000339363 IL17RAQ96F46 866 aa10.75□□□□□ -0.69
RPGR-202ENST00000339363 PDE11AQ9HCR9 933 aa10.75□□□□□ -0.69
RPGR-202ENST00000339363 LIMCH1Q9UPQ0 1083 aa10.75□□□□□ -0.69
RPGR-202ENST00000339363 AKAP12Q02952 1782 aa10.75□□□□□ -0.69
RPGR-202ENST00000339363 PDILTQ8N807 584 aa10.75□□□□□ -0.69
RPGR-202ENST00000339363 POLA2Q14181 598 aa10.74□□□□□ -0.69
RPGR-202ENST00000339363 NBPF11Q86T75 865 aa10.74□□□□□ -0.69
RPGR-202ENST00000339363 JPH2Q9BR39 696 aaPredicted RBP10.74□□□□□ -0.69
RPGR-202ENST00000339363 COL15A1P39059 1388 aa10.74□□□□□ -0.69
RPGR-202ENST00000339363 KINO60870 393 aaKnown RBP10.74□□□□□ -0.69
RPGR-202ENST00000339363 CEP57L1Q8IYX8 460 aa10.74□□□□□ -0.69
RPGR-202ENST00000339363 NAT10Q9H0A0 1025 aaKnown RBP10.74□□□□□ -0.69
RPGR-202ENST00000339363 USP6P35125 1406 aa10.74□□□□□ -0.69
RPGR-202ENST00000339363 FAM208AQ9UK61 1670 aaKnown RBP10.74□□□□□ -0.69
RPGR-202ENST00000339363 SETD1BQ9UPS6 1966 aaKnown RBP10.74□□□□□ -0.69
RPGR-202ENST00000339363 JAK2O60674 1132 aa10.74□□□□□ -0.69
RPGR-202ENST00000339363 ZNF589Q86UQ0 364 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms