RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 TNPO1Q92973 898 aaKnown RBP13.37□□□□□ -0.27
LRP1-202ENST00000338962 GBP4Q96PP9 640 aa13.37□□□□□ -0.27
LRP1-202ENST00000338962 CASZ1Q86V15 1759 aa13.37□□□□□ -0.27
LRP1-202ENST00000338962 SCN7AQ01118 1682 aa13.36□□□□□ -0.27
LRP1-202ENST00000338962 DDX11L8A8MPP1 907 aa13.36□□□□□ -0.27
LRP1-202ENST00000338962 MMP10P09238 476 aa13.36□□□□□ -0.27
LRP1-202ENST00000338962 GPTP24298 496 aa13.36□□□□□ -0.27
LRP1-202ENST00000338962 DDR1Q08345 913 aa13.36□□□□□ -0.27
LRP1-202ENST00000338962 BICDL1Q6ZP65 573 aa13.36□□□□□ -0.27
LRP1-202ENST00000338962 IL27Q8NEV9 243 aa13.36□□□□□ -0.27
LRP1-202ENST00000338962 FSD1Q9BTV5 496 aa13.36□□□□□ -0.27
LRP1-202ENST00000338962 CARMIL3Q8ND23 1372 aa13.36□□□□□ -0.27
LRP1-202ENST00000338962 SUSD4Q5VX71 490 aa13.35□□□□□ -0.27
LRP1-202ENST00000338962 UPF3BQ9BZI7 483 aaKnown RBP13.35□□□□□ -0.27
LRP1-202ENST00000338962 BCORQ6W2J9 1755 aa13.35□□□□□ -0.27
LRP1-202ENST00000338962 SERPINB2P05120 415 aa13.35□□□□□ -0.27
LRP1-202ENST00000338962 ATP5JP18859 108 aa13.35□□□□□ -0.27
LRP1-202ENST00000338962 IL15P40933 162 aaPredicted RBP13.35□□□□□ -0.27
LRP1-202ENST00000338962 PTGER2P43116 358 aa13.35□□□□□ -0.27
LRP1-202ENST00000338962 CWC22Q9HCG8 908 aaKnown RBP13.35□□□□□ -0.27
LRP1-202ENST00000338962 ATF5Q9Y2D1 282 aaPredicted RBP13.35□□□□□ -0.27
LRP1-202ENST00000338962 TPTE2Q6XPS3 522 aa13.34□□□□□ -0.27
LRP1-202ENST00000338962 UTP14AQ9BVJ6 771 aaKnown RBP13.34□□□□□ -0.27
LRP1-202ENST00000338962 NTSR2O95665 410 aa13.34□□□□□ -0.27
LRP1-202ENST00000338962 PCCAP05165 728 aaPredicted RBP13.34□□□□□ -0.27
LRP1-202ENST00000338962 NUCB2P80303 420 aa13.34□□□□□ -0.27
LRP1-202ENST00000338962 CCDC57Q2TAC2 916 aa13.34□□□□□ -0.27
LRP1-202ENST00000338962 ZBTB38Q8NAP3 1195 aaPredicted RBP13.34□□□□□ -0.27
LRP1-202ENST00000338962 TMX3Q96JJ7 454 aa13.34□□□□□ -0.27
LRP1-202ENST00000338962 DBNDD2Q9BQY9 259 aa13.34□□□□□ -0.27
LRP1-202ENST00000338962 NYXQ9GZU5 481 aa13.34□□□□□ -0.27
LRP1-202ENST00000338962 SPON1Q9HCB6 807 aa13.34□□□□□ -0.27
LRP1-202ENST00000338962 PARP3Q9Y6F1 533 aa13.34□□□□□ -0.27
LRP1-202ENST00000338962 EYA2O00167 538 aa13.33□□□□□ -0.28
LRP1-202ENST00000338962 NMIQ13287 307 aaPredicted RBP13.33□□□□□ -0.28
LRP1-202ENST00000338962 ATG9AQ7Z3C6 839 aa13.33□□□□□ -0.28
LRP1-202ENST00000338962 FAM89AQ96GI7 184 aa13.33□□□□□ -0.28
LRP1-202ENST00000338962 FAM227BQ96M60 508 aa13.33□□□□□ -0.28
LRP1-202ENST00000338962 SNX14Q9Y5W7 946 aa13.33□□□□□ -0.28
LRP1-202ENST00000338962 CIAO1O76071 339 aa13.32□□□□□ -0.28
LRP1-202ENST00000338962 POLD1P28340 1107 aa13.32□□□□□ -0.28
LRP1-202ENST00000338962 SLC10A5Q5PT55 438 aa13.32□□□□□ -0.28
LRP1-202ENST00000338962 NBPF5PQ86XG9 351 aaPredicted RBP13.32□□□□□ -0.28
LRP1-202ENST00000338962 GPR108Q9NPR9 543 aa13.32□□□□□ -0.28
LRP1-202ENST00000338962 TRMT112Q9UI30 125 aaKnown RBP13.32□□□□□ -0.28
LRP1-202ENST00000338962 CCDC171Q6TFL3 1326 aa13.32□□□□□ -0.28
LRP1-202ENST00000338962 ZGPATQ8N5A5 531 aaKnown RBP13.32□□□□□ -0.28
LRP1-202ENST00000338962 ZNF594Q96JF6 807 aaPredicted RBP13.32□□□□□ -0.28
LRP1-202ENST00000338962 NEUROD6Q96NK8 337 aa13.32□□□□□ -0.28
LRP1-202ENST00000338962 KCNJ4P48050 445 aa13.31□□□□□ -0.28
LRP1-202ENST00000338962 PTH1RQ03431 593 aa13.31□□□□□ -0.28
LRP1-202ENST00000338962 PRR5LQ6MZQ0 368 aa13.31□□□□□ -0.28
LRP1-202ENST00000338962 NOL8Q76FK4 1167 aaKnown RBP13.31□□□□□ -0.28
LRP1-202ENST00000338962 PKNOX2Q96KN3 472 aa13.31□□□□□ -0.28
LRP1-202ENST00000338962 DNAJC2Q99543 621 aaKnown RBP13.31□□□□□ -0.28
LRP1-202ENST00000338962 PLA2G12BQ9BX93 195 aa13.31□□□□□ -0.28
LRP1-202ENST00000338962 SH3TC1Q8TE82 1336 aa13.31□□□□□ -0.28
LRP1-202ENST00000338962 NUP98P52948 1817 aa13.31□□□□□ -0.28
LRP1-202ENST00000338962 A0A0D9SFI3 127 aa13.31□□□□□ -0.28
LRP1-202ENST00000338962 LRRC24Q50LG9 513 aa13.31□□□□□ -0.28
LRP1-202ENST00000338962 TAF7LQ5H9L4 462 aa13.31□□□□□ -0.28
LRP1-202ENST00000338962 RASEFQ8IZ41 740 aa13.31□□□□□ -0.28
LRP1-202ENST00000338962 CNBD1Q8NA66 436 aa13.31□□□□□ -0.28
LRP1-202ENST00000338962 EDC3Q96F86 508 aaKnown RBP13.31□□□□□ -0.28
LRP1-202ENST00000338962 HAUS7Q99871 368 aa13.31□□□□□ -0.28
LRP1-202ENST00000338962 COL24A1Q17RW2 1714 aa13.31□□□□□ -0.28
LRP1-202ENST00000338962 RFX7Q2KHR2 1363 aa13.3□□□□□ -0.28
LRP1-202ENST00000338962 CDHR2Q9BYE9 1310 aa13.3□□□□□ -0.28
LRP1-202ENST00000338962 TRAK2O60296 914 aa13.3□□□□□ -0.28
LRP1-202ENST00000338962 ZKSCAN1P17029 563 aaPredicted RBP13.3□□□□□ -0.28
LRP1-202ENST00000338962 SNRKQ9NRH2 765 aa13.3□□□□□ -0.28
LRP1-202ENST00000338962 FBXO3Q9UK99 471 aa13.3□□□□□ -0.28
LRP1-202ENST00000338962 FAM177BA6PVY3 158 aa13.3□□□□□ -0.28
LRP1-202ENST00000338962 GOLGA6L22H0YM25 854 aa13.3□□□□□ -0.28
LRP1-202ENST00000338962 PTMSP20962 102 aa13.3□□□□□ -0.28
LRP1-202ENST00000338962 IFIT5Q13325 482 aaKnown RBP13.3□□□□□ -0.28
LRP1-202ENST00000338962 ERFEQ4G0M1 354 aa13.3□□□□□ -0.28
LRP1-202ENST00000338962 PRPF40BQ6NWY9 871 aaKnown RBP13.3□□□□□ -0.28
LRP1-202ENST00000338962 SYNE4Q8N205 404 aa13.3□□□□□ -0.28
LRP1-202ENST00000338962 INTS4Q96HW7 963 aaKnown RBP13.3□□□□□ -0.28
LRP1-202ENST00000338962 CCDC85AQ96PX6 553 aaPredicted RBP13.3□□□□□ -0.28
LRP1-202ENST00000338962 CEP126Q9P2H0 1117 aa13.3□□□□□ -0.28
LRP1-202ENST00000338962 ZNF609O15014 1411 aa13.29□□□□□ -0.28
LRP1-202ENST00000338962 MED23Q9ULK4 1368 aa13.29□□□□□ -0.28
LRP1-202ENST00000338962 A0A1B0GUL7 405 aa13.29□□□□□ -0.28
LRP1-202ENST00000338962 KLRG2A4D1S0 409 aaPredicted RBP13.29□□□□□ -0.28
LRP1-202ENST00000338962 TIMM10P62072 90 aa13.29□□□□□ -0.28
LRP1-202ENST00000338962 CUL4AQ13619 759 aa13.29□□□□□ -0.28
LRP1-202ENST00000338962 MAP4K1Q92918 833 aa13.29□□□□□ -0.28
LRP1-202ENST00000338962 BRIP1Q9BX63 1249 aa13.29□□□□□ -0.28
LRP1-202ENST00000338962 RBM8AQ9Y5S9 174 aaKnown RBP13.29□□□□□ -0.28
LRP1-202ENST00000338962 NDUFB9Q9Y6M9 179 aa13.29□□□□□ -0.28
LRP1-202ENST00000338962 CSF1RP07333 972 aa13.28□□□□□ -0.28
LRP1-202ENST00000338962 HSP90B1P14625 803 aaKnown RBP13.28□□□□□ -0.28
LRP1-202ENST00000338962 CASTP20810 708 aaKnown RBP13.28□□□□□ -0.28
LRP1-202ENST00000338962 GTF2E1P29083 439 aaPredicted RBP13.28□□□□□ -0.28
LRP1-202ENST00000338962 ST5P78524 1137 aa13.28□□□□□ -0.28
LRP1-202ENST00000338962 NECTIN1Q15223 517 aa13.28□□□□□ -0.28
LRP1-202ENST00000338962 RNF20Q5VTR2 975 aa13.28□□□□□ -0.28
LRP1-202ENST00000338962 CLEC17AQ6ZS10 378 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms