RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 CAMTA2O94983 1202 aa19.51■□□□□ 0.71
SCNN1A-202ENST00000338748 SUSD4Q5VX71 490 aa19.51■□□□□ 0.71
SCNN1A-202ENST00000338748 TCEANC2Q96MN5 208 aa19.51■□□□□ 0.71
SCNN1A-202ENST00000338748 PDRG1Q9NUG6 133 aa19.51■□□□□ 0.71
SCNN1A-202ENST00000338748 FBXO3Q9UK99 471 aa19.51■□□□□ 0.71
SCNN1A-202ENST00000338748 LIMCH1Q9UPQ0 1083 aa19.51■□□□□ 0.71
SCNN1A-202ENST00000338748 VPS53Q5VIR6 699 aa19.5■□□□□ 0.71
SCNN1A-202ENST00000338748 LDHAL6AQ6ZMR3 332 aa19.5■□□□□ 0.71
SCNN1A-202ENST00000338748 CYP46A1Q9Y6A2 500 aa19.5■□□□□ 0.71
SCNN1A-202ENST00000338748 BRD1O95696 1058 aa19.49■□□□□ 0.71
SCNN1A-202ENST00000338748 VPS72Q15906 364 aa19.49■□□□□ 0.71
SCNN1A-202ENST00000338748 PI16Q6UXB8 463 aa19.49■□□□□ 0.71
SCNN1A-202ENST00000338748 COL5A3P25940 1745 aaPredicted RBP19.49■□□□□ 0.71
SCNN1A-202ENST00000338748 PDE8AO60658 829 aa19.49■□□□□ 0.71
SCNN1A-202ENST00000338748 HCLS1P14317 486 aaPredicted RBP19.49■□□□□ 0.71
SCNN1A-202ENST00000338748 ST3GAL1Q11201 340 aa19.49■□□□□ 0.71
SCNN1A-202ENST00000338748 MCMDC2Q4G0Z9 681 aa19.49■□□□□ 0.71
SCNN1A-202ENST00000338748 USPL1Q5W0Q7 1092 aa19.49■□□□□ 0.71
SCNN1A-202ENST00000338748 SH3TC1Q8TE82 1336 aa19.49■□□□□ 0.71
SCNN1A-202ENST00000338748 METTL24Q5JXM2 366 aa19.48■□□□□ 0.71
SCNN1A-202ENST00000338748 VGLL2Q8N8G2 317 aa19.48■□□□□ 0.71
SCNN1A-202ENST00000338748 ANKRD18BA2A2Z9 1011 aa19.48■□□□□ 0.71
SCNN1A-202ENST00000338748 LRP5O75197 1615 aa19.47■□□□□ 0.71
SCNN1A-202ENST00000338748 FKBP4Q02790 459 aaKnown RBP eCLIP19.47■□□□□ 0.71
SCNN1A-202ENST00000338748 AKAP2Q9Y2D5 859 aa19.47■□□□□ 0.71
SCNN1A-202ENST00000338748 TTC39AQ5SRH9 613 aa19.47■□□□□ 0.71
SCNN1A-202ENST00000338748 SMIM5Q71RC9 77 aa19.47■□□□□ 0.71
SCNN1A-202ENST00000338748 LINC00116Q8NCU8 138 aa19.47■□□□□ 0.71
SCNN1A-202ENST00000338748 CNNM1Q9NRU3 951 aa19.47■□□□□ 0.71
SCNN1A-202ENST00000338748 SPEF2Q9C093 1822 aa19.46■□□□□ 0.71
SCNN1A-202ENST00000338748 ATP2B3Q16720 1220 aa19.46■□□□□ 0.71
SCNN1A-202ENST00000338748 ME3Q16798 604 aa19.46■□□□□ 0.71
SCNN1A-202ENST00000338748 ZMYM1Q5SVZ6 1142 aa19.46■□□□□ 0.71
SCNN1A-202ENST00000338748 GORABQ5T7V8 394 aa19.46■□□□□ 0.71
SCNN1A-202ENST00000338748 RNF20Q5VTR2 975 aa19.46■□□□□ 0.71
SCNN1A-202ENST00000338748 IL27Q8NEV9 243 aa19.46■□□□□ 0.71
SCNN1A-202ENST00000338748 LMBRD1Q9NUN5 540 aa19.46■□□□□ 0.71
SCNN1A-202ENST00000338748 GOLGA6L22H0YM25 854 aa19.45■□□□□ 0.7
SCNN1A-202ENST00000338748 FAM182BQ5T319 152 aa19.45■□□□□ 0.7
SCNN1A-202ENST00000338748 CCDC83Q8IWF9 413 aa19.45■□□□□ 0.7
SCNN1A-202ENST00000338748 FNBP4Q8N3X1 1017 aaPredicted RBP19.45■□□□□ 0.7
SCNN1A-202ENST00000338748 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.45■□□□□ 0.7
SCNN1A-202ENST00000338748 TPCN1Q9ULQ1 816 aa19.45■□□□□ 0.7
SCNN1A-202ENST00000338748 MAST3O60307 1309 aa19.45■□□□□ 0.7
SCNN1A-202ENST00000338748 DDX60Q8IY21 1712 aaKnown RBP19.45■□□□□ 0.7
SCNN1A-202ENST00000338748 A0A0G2JLW4 131 aa19.45■□□□□ 0.7
SCNN1A-202ENST00000338748 CYP21A2P08686 494 aa19.45■□□□□ 0.7
SCNN1A-202ENST00000338748 CCDC158Q5M9N0 1113 aa19.45■□□□□ 0.7
SCNN1A-202ENST00000338748 ZAP70P43403 619 aa19.44■□□□□ 0.7
SCNN1A-202ENST00000338748 TSGA10IPQ3SY00 556 aa19.44■□□□□ 0.7
SCNN1A-202ENST00000338748 SMARCC1Q92922 1105 aaPredicted RBP19.44■□□□□ 0.7
SCNN1A-202ENST00000338748 HMG20BQ9P0W2 317 aa19.44■□□□□ 0.7
SCNN1A-202ENST00000338748 FSD2A1L4K1 749 aa19.44■□□□□ 0.7
SCNN1A-202ENST00000338748 M0R2C6 588 aa19.44■□□□□ 0.7
SCNN1A-202ENST00000338748 RPS6KB1P23443 525 aa19.44■□□□□ 0.7
SCNN1A-202ENST00000338748 BLOC1S2Q6QNY1 142 aa19.44■□□□□ 0.7
SCNN1A-202ENST00000338748 NECAB1Q8N987 351 aa19.44■□□□□ 0.7
SCNN1A-202ENST00000338748 SEC31BQ9NQW1 1179 aa19.44■□□□□ 0.7
SCNN1A-202ENST00000338748 BRPF3Q9ULD4 1205 aa19.44■□□□□ 0.7
SCNN1A-202ENST00000338748 NIP7Q9Y221 180 aaKnown RBP eCLIP19.44■□□□□ 0.7
SCNN1A-202ENST00000338748 AKAP11Q9UKA4 1901 aa19.44■□□□□ 0.7
SCNN1A-202ENST00000338748 COL4A1P02462 1669 aa19.43■□□□□ 0.7
SCNN1A-202ENST00000338748 NTSR2O95665 410 aa19.43■□□□□ 0.7
SCNN1A-202ENST00000338748 PSMA5P28066 241 aa19.43■□□□□ 0.7
SCNN1A-202ENST00000338748 MCAMP43121 646 aa19.43■□□□□ 0.7
SCNN1A-202ENST00000338748 TOB2Q14106 344 aaPredicted RBP19.43■□□□□ 0.7
SCNN1A-202ENST00000338748 HELBQ8NG08 1087 aaPredicted RBP19.43■□□□□ 0.7
SCNN1A-202ENST00000338748 OSBP2Q969R2 916 aa19.43■□□□□ 0.7
SCNN1A-202ENST00000338748 UTP14AQ9BVJ6 771 aaKnown RBP19.43■□□□□ 0.7
SCNN1A-202ENST00000338748 HELLSQ9NRZ9 838 aa19.43■□□□□ 0.7
SCNN1A-202ENST00000338748 SNAP23O00161 211 aa19.43■□□□□ 0.7
SCNN1A-202ENST00000338748 RNF113AO15541 343 aaKnown RBP19.43■□□□□ 0.7
SCNN1A-202ENST00000338748 STOX1Q6ZVD7 989 aa19.43■□□□□ 0.7
SCNN1A-202ENST00000338748 DDX49Q9Y6V7 483 aaKnown RBP19.43■□□□□ 0.7
SCNN1A-202ENST00000338748 U3KPZ7 1027 aaPredicted RBP19.43■□□□□ 0.7
SCNN1A-202ENST00000338748 PDE8BO95263 885 aa19.42■□□□□ 0.7
SCNN1A-202ENST00000338748 SKOR2Q2VWA4 1001 aaPredicted RBP19.42■□□□□ 0.7
SCNN1A-202ENST00000338748 FOXD4L6Q3SYB3 417 aaPredicted RBP19.42■□□□□ 0.7
SCNN1A-202ENST00000338748 FOXD4L3Q6VB84 417 aaPredicted RBP19.42■□□□□ 0.7
SCNN1A-202ENST00000338748 USP21Q9UK80 565 aa19.42■□□□□ 0.7
SCNN1A-202ENST00000338748 BCORQ6W2J9 1755 aa19.42■□□□□ 0.7
SCNN1A-202ENST00000338748 PRPF40AO75400 957 aaKnown RBP19.41■□□□□ 0.7
SCNN1A-202ENST00000338748 PTMSP20962 102 aa19.41■□□□□ 0.7
SCNN1A-202ENST00000338748 KLHL40Q2TBA0 621 aa19.41■□□□□ 0.7
SCNN1A-202ENST00000338748 HSPD1P10809 573 aaKnown RBP19.41■□□□□ 0.7
SCNN1A-202ENST00000338748 FOXP2O15409 715 aa19.4■□□□□ 0.7
SCNN1A-202ENST00000338748 SH2B1Q9NRF2 756 aaPredicted RBP19.4■□□□□ 0.7
SCNN1A-202ENST00000338748 ZNF831Q5JPB2 1677 aa19.4■□□□□ 0.7
SCNN1A-202ENST00000338748 THSD7AQ9UPZ6 1657 aa19.4■□□□□ 0.7
SCNN1A-202ENST00000338748 SYT1P21579 422 aa19.4■□□□□ 0.7
SCNN1A-202ENST00000338748 PARP10Q53GL7 1025 aa19.4■□□□□ 0.7
SCNN1A-202ENST00000338748 SMC3Q9UQE7 1217 aa19.4■□□□□ 0.7
SCNN1A-202ENST00000338748 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.4■□□□□ 0.7
SCNN1A-202ENST00000338748 MYO5AQ9Y4I1 1855 aaKnown RBP19.39■□□□□ 0.7
SCNN1A-202ENST00000338748 BTAF1O14981 1849 aa19.39■□□□□ 0.69
SCNN1A-202ENST00000338748 LAMA4Q16363 1823 aa19.39■□□□□ 0.69
SCNN1A-202ENST00000338748 PHKA1P46020 1223 aa19.39■□□□□ 0.69
SCNN1A-202ENST00000338748 GAS2L3Q86XJ1 694 aa19.39■□□□□ 0.69
SCNN1A-202ENST00000338748 GPT2Q8TD30 523 aa19.39■□□□□ 0.69
SCNN1A-202ENST00000338748 DSCC1Q9BVC3 393 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms