RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 GORABQ5T7V8 394 aa19.59■□□□□ 0.73
HPS1-202ENST00000338546 ZNF772Q68DY9 489 aaPredicted RBP19.59■□□□□ 0.73
HPS1-202ENST00000338546 MAP4K1Q92918 833 aa19.59■□□□□ 0.73
HPS1-202ENST00000338546 PALD1Q9ULE6 856 aa19.59■□□□□ 0.73
HPS1-202ENST00000338546 GNPATO15228 680 aa19.58■□□□□ 0.73
HPS1-202ENST00000338546 HCLS1P14317 486 aaPredicted RBP19.58■□□□□ 0.73
HPS1-202ENST00000338546 SF3B3Q15393 1217 aaKnown RBP19.58■□□□□ 0.73
HPS1-202ENST00000338546 FAM182BQ5T319 152 aa19.58■□□□□ 0.73
HPS1-202ENST00000338546 KRT27Q7Z3Y8 459 aa19.58■□□□□ 0.73
HPS1-202ENST00000338546 DNAJC2Q99543 621 aaKnown RBP19.58■□□□□ 0.73
HPS1-202ENST00000338546 C4BP0C0L5 1744 aa19.58■□□□□ 0.72
HPS1-202ENST00000338546 NEK4P51957 841 aa19.57■□□□□ 0.72
HPS1-202ENST00000338546 TTC39AQ5SRH9 613 aa19.57■□□□□ 0.72
HPS1-202ENST00000338546 FAM227BQ96M60 508 aa19.57■□□□□ 0.72
HPS1-202ENST00000338546 TM6SF1Q9BZW5 370 aa19.57■□□□□ 0.72
HPS1-202ENST00000338546 BCL2L12Q9HB09 334 aa19.57■□□□□ 0.72
HPS1-202ENST00000338546 HELLSQ9NRZ9 838 aa19.57■□□□□ 0.72
HPS1-202ENST00000338546 HSP90AA1P07900 732 aaKnown RBP19.57■□□□□ 0.72
HPS1-202ENST00000338546 IGHMBP2P38935 993 aaKnown RBP19.57■□□□□ 0.72
HPS1-202ENST00000338546 NECTIN1Q15223 517 aa19.57■□□□□ 0.72
HPS1-202ENST00000338546 NFKBIBQ15653 356 aa19.57■□□□□ 0.72
HPS1-202ENST00000338546 MPHOSPH8Q99549 860 aa19.57■□□□□ 0.72
HPS1-202ENST00000338546 SNX14Q9Y5W7 946 aa19.57■□□□□ 0.72
HPS1-202ENST00000338546 COL24A1Q17RW2 1714 aa19.56■□□□□ 0.72
HPS1-202ENST00000338546 A0A0D9SFI3 127 aa19.56■□□□□ 0.72
HPS1-202ENST00000338546 RBM6P78332 1123 aaKnown RBP19.56■□□□□ 0.72
HPS1-202ENST00000338546 PUM3Q15397 648 aaKnown RBP19.56■□□□□ 0.72
HPS1-202ENST00000338546 MCMDC2Q4G0Z9 681 aa19.56■□□□□ 0.72
HPS1-202ENST00000338546 LPIN2Q92539 896 aa19.56■□□□□ 0.72
HPS1-202ENST00000338546 SETDB2Q96T68 719 aa19.56■□□□□ 0.72
HPS1-202ENST00000338546 CDC5LQ99459 802 aaKnown RBP19.56■□□□□ 0.72
HPS1-202ENST00000338546 CWC22Q9HCG8 908 aaKnown RBP19.56■□□□□ 0.72
HPS1-202ENST00000338546 ZFYP08048 801 aaPredicted RBP19.55■□□□□ 0.72
HPS1-202ENST00000338546 ZKSCAN1P17029 563 aaPredicted RBP19.55■□□□□ 0.72
HPS1-202ENST00000338546 KCNQ4P56696 695 aa19.55■□□□□ 0.72
HPS1-202ENST00000338546 PTH1RQ03431 593 aa19.55■□□□□ 0.72
HPS1-202ENST00000338546 TRAPPC3LQ5T215 181 aa19.55■□□□□ 0.72
HPS1-202ENST00000338546 RNF20Q5VTR2 975 aa19.55■□□□□ 0.72
HPS1-202ENST00000338546 USPL1Q5W0Q7 1092 aa19.55■□□□□ 0.72
HPS1-202ENST00000338546 HMG20BQ9P0W2 317 aa19.55■□□□□ 0.72
HPS1-202ENST00000338546 GOLIM4O00461 696 aa19.54■□□□□ 0.72
HPS1-202ENST00000338546 UQCRFS1P1P0C7P4 283 aa19.54■□□□□ 0.72
HPS1-202ENST00000338546 FGFR2P21802 821 aa19.54■□□□□ 0.72
HPS1-202ENST00000338546 SSFA2P28290 1259 aa19.54■□□□□ 0.72
HPS1-202ENST00000338546 NBR1Q14596 966 aa19.54■□□□□ 0.72
HPS1-202ENST00000338546 TBC1D9BQ66K14 1250 aa19.54■□□□□ 0.72
HPS1-202ENST00000338546 DDX46Q7L014 1031 aaKnown RBP19.54■□□□□ 0.72
HPS1-202ENST00000338546 ARHGEF1Q92888 912 aaKnown RBP19.54■□□□□ 0.72
HPS1-202ENST00000338546 EDC3Q96F86 508 aaKnown RBP19.54■□□□□ 0.72
HPS1-202ENST00000338546 FAM177BA6PVY3 158 aa19.53■□□□□ 0.72
HPS1-202ENST00000338546 TAF5LO75529 589 aa19.53■□□□□ 0.72
HPS1-202ENST00000338546 ADORA1P30542 326 aa19.53■□□□□ 0.72
HPS1-202ENST00000338546 TSGA10IPQ3SY00 556 aa19.53■□□□□ 0.72
HPS1-202ENST00000338546 TPTE2Q6XPS3 522 aa19.53■□□□□ 0.72
HPS1-202ENST00000338546 ARAP2Q8WZ64 1704 aa19.53■□□□□ 0.72
HPS1-202ENST00000338546 RNF113AO15541 343 aaKnown RBP19.53■□□□□ 0.72
HPS1-202ENST00000338546 ERFEQ4G0M1 354 aa19.53■□□□□ 0.72
HPS1-202ENST00000338546 ZMYM1Q5SVZ6 1142 aa19.53■□□□□ 0.72
HPS1-202ENST00000338546 SPRYD3Q8NCJ5 442 aa19.53■□□□□ 0.72
HPS1-202ENST00000338546 RBM8AQ9Y5S9 174 aaKnown RBP19.53■□□□□ 0.72
HPS1-202ENST00000338546 BRWD3Q6RI45 1802 aa19.52■□□□□ 0.72
HPS1-202ENST00000338546 SLC5A1P13866 664 aa19.52■□□□□ 0.71
HPS1-202ENST00000338546 RFC4P35249 363 aa19.52■□□□□ 0.71
HPS1-202ENST00000338546 TTF1Q15361 905 aaPredicted RBP19.52■□□□□ 0.71
HPS1-202ENST00000338546 PSMA5P28066 241 aa19.51■□□□□ 0.71
HPS1-202ENST00000338546 GTF2E1P29083 439 aaPredicted RBP19.51■□□□□ 0.71
HPS1-202ENST00000338546 ARID4AP29374 1257 aaPredicted RBP19.51■□□□□ 0.71
HPS1-202ENST00000338546 KCNJ4P48050 445 aa19.51■□□□□ 0.71
HPS1-202ENST00000338546 CREB3L3Q68CJ9 461 aa19.51■□□□□ 0.71
HPS1-202ENST00000338546 PRPF40BQ6NWY9 871 aaKnown RBP19.51■□□□□ 0.71
HPS1-202ENST00000338546 RASEFQ8IZ41 740 aa19.51■□□□□ 0.71
HPS1-202ENST00000338546 INTS4Q96HW7 963 aaKnown RBP19.51■□□□□ 0.71
HPS1-202ENST00000338546 SEC31BQ9NQW1 1179 aa19.51■□□□□ 0.71
HPS1-202ENST00000338546 U3KPZ7 1027 aaPredicted RBP19.51■□□□□ 0.71
HPS1-202ENST00000338546 CUL4AQ13619 759 aa19.5■□□□□ 0.71
HPS1-202ENST00000338546 NBPF5PQ86XG9 351 aaPredicted RBP19.5■□□□□ 0.71
HPS1-202ENST00000338546 ZSWIM6Q9HCJ5 1215 aa19.5■□□□□ 0.71
HPS1-202ENST00000338546 SRP68Q9UHB9 627 aaKnown RBP19.5■□□□□ 0.71
HPS1-202ENST00000338546 C4AP0C0L4 1744 aa19.49■□□□□ 0.71
HPS1-202ENST00000338546 KRT32Q14532 448 aa19.49■□□□□ 0.71
HPS1-202ENST00000338546 ZSCAN25Q6NSZ9 544 aa19.49■□□□□ 0.71
HPS1-202ENST00000338546 ZNF589Q86UQ0 364 aaPredicted RBP19.49■□□□□ 0.71
HPS1-202ENST00000338546 ANKRD18AQ8IVF6 992 aa19.49■□□□□ 0.71
HPS1-202ENST00000338546 TTC14Q96N46 770 aa19.49■□□□□ 0.71
HPS1-202ENST00000338546 NLRP3Q96P20 1036 aa19.49■□□□□ 0.71
HPS1-202ENST00000338546 LRRC4BQ9NT99 713 aa19.49■□□□□ 0.71
HPS1-202ENST00000338546 BSDC1Q9NW68 430 aaPredicted RBP19.49■□□□□ 0.71
HPS1-202ENST00000338546 NDUFB9Q9Y6M9 179 aa19.49■□□□□ 0.71
HPS1-202ENST00000338546 FKBP4Q02790 459 aaKnown RBP eCLIP19.49■□□□□ 0.71
HPS1-202ENST00000338546 VPS53Q5VIR6 699 aa19.49■□□□□ 0.71
HPS1-202ENST00000338546 TMX3Q96JJ7 454 aa19.49■□□□□ 0.71
HPS1-202ENST00000338546 DSCC1Q9BVC3 393 aa19.49■□□□□ 0.71
HPS1-202ENST00000338546 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.49■□□□□ 0.716e-7■■■□□ 17.8
HPS1-202ENST00000338546 AKAP11Q9UKA4 1901 aa19.48■□□□□ 0.71
HPS1-202ENST00000338546 SLC27A2O14975 620 aa19.48■□□□□ 0.71
HPS1-202ENST00000338546 NUCB2P80303 420 aa19.48■□□□□ 0.71
HPS1-202ENST00000338546 RAB3GAP1Q15042 981 aa19.48■□□□□ 0.71
HPS1-202ENST00000338546 CCDC102BQ68D86 513 aa19.48■□□□□ 0.71
HPS1-202ENST00000338546 ALDH8A1Q9H2A2 487 aaPredicted RBP19.48■□□□□ 0.71
HPS1-202ENST00000338546 CYP46A1Q9Y6A2 500 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms