RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 QSER1Q2KHR3 1735 aa18.04■□□□□ 0.48
CDK5RAP3-201ENST00000338399 CDC45O75419 566 aa18.04■□□□□ 0.48
CDK5RAP3-201ENST00000338399 ZNF609O15014 1411 aa18.04■□□□□ 0.48
CDK5RAP3-201ENST00000338399 AK9Q5TCS8 1911 aa18.04■□□□□ 0.48
CDK5RAP3-201ENST00000338399 A0A1B0GUL7 405 aa18.03■□□□□ 0.48
CDK5RAP3-201ENST00000338399 MAP4K4O95819 1239 aaPredicted RBP18.03■□□□□ 0.48
CDK5RAP3-201ENST00000338399 ST5P78524 1137 aa18.03■□□□□ 0.48
CDK5RAP3-201ENST00000338399 TBC1D9Q6ZT07 1266 aa18.03■□□□□ 0.48
CDK5RAP3-201ENST00000338399 CCDC125Q86Z20 511 aa18.03■□□□□ 0.48
CDK5RAP3-201ENST00000338399 RILPL2Q969X0 211 aa18.03■□□□□ 0.48
CDK5RAP3-201ENST00000338399 AKAP2Q9Y2D5 859 aa18.03■□□□□ 0.48
CDK5RAP3-201ENST00000338399 MSL1Q68DK7 614 aa18.03■□□□□ 0.48
CDK5RAP3-201ENST00000338399 ANKRD18AQ8IVF6 992 aa18.03■□□□□ 0.48
CDK5RAP3-201ENST00000338399 MROH5Q6ZUA9 1318 aa18.02■□□□□ 0.48
CDK5RAP3-201ENST00000338399 VGLL2Q8N8G2 317 aa18.01■□□□□ 0.47
CDK5RAP3-201ENST00000338399 HELBQ8NG08 1087 aaPredicted RBP18.01■□□□□ 0.47
CDK5RAP3-201ENST00000338399 CELF1Q92879 486 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP3-201ENST00000338399 PDE8BO95263 885 aa18.01■□□□□ 0.47
CDK5RAP3-201ENST00000338399 MMP10P09238 476 aa18■□□□□ 0.47
CDK5RAP3-201ENST00000338399 ATP2B3Q16720 1220 aa18■□□□□ 0.47
CDK5RAP3-201ENST00000338399 DDX46Q7L014 1031 aaKnown RBP18■□□□□ 0.47
CDK5RAP3-201ENST00000338399 BOLA2Q9H3K6 86 aa18■□□□□ 0.47
CDK5RAP3-201ENST00000338399 NRXN2Q9P2S2 1712 aa17.99■□□□□ 0.47
CDK5RAP3-201ENST00000338399 ATP5JP18859 108 aa17.99■□□□□ 0.47
CDK5RAP3-201ENST00000338399 XAGE2Q96GT9 111 aa17.99■□□□□ 0.47
CDK5RAP3-201ENST00000338399 TAF5LO75529 589 aa17.99■□□□□ 0.47
CDK5RAP3-201ENST00000338399 ADORA1P30542 326 aa17.99■□□□□ 0.47
CDK5RAP3-201ENST00000338399 MFAP1P55081 439 aaKnown RBP17.99■□□□□ 0.47
CDK5RAP3-201ENST00000338399 RPS8P62241 208 aaKnown RBP17.99■□□□□ 0.47
CDK5RAP3-201ENST00000338399 CHRNDQ07001 517 aa17.99■□□□□ 0.47
CDK5RAP3-201ENST00000338399 CNTROBQ8N137 903 aa17.99■□□□□ 0.47
CDK5RAP3-201ENST00000338399 BSDC1Q9NW68 430 aaPredicted RBP17.99■□□□□ 0.47
CDK5RAP3-201ENST00000338399 PARP3Q9Y6F1 533 aa17.99■□□□□ 0.47
CDK5RAP3-201ENST00000338399 GORABQ5T7V8 394 aa17.97■□□□□ 0.47
CDK5RAP3-201ENST00000338399 CASC1Q6TDU7 716 aa17.97■□□□□ 0.47
CDK5RAP3-201ENST00000338399 PDGFDQ9GZP0 370 aaPredicted RBP17.97■□□□□ 0.47
CDK5RAP3-201ENST00000338399 A0A1B0GUL6 1792 aa17.97■□□□□ 0.47
CDK5RAP3-201ENST00000338399 ANKRD31Q8N7Z5 1873 aa17.97■□□□□ 0.47
CDK5RAP3-201ENST00000338399 PUM3Q15397 648 aaKnown RBP17.97■□□□□ 0.47
CDK5RAP3-201ENST00000338399 RPGRQ92834 1020 aaKnown RBP17.97■□□□□ 0.47
CDK5RAP3-201ENST00000338399 SNAP23O00161 211 aa17.96■□□□□ 0.47
CDK5RAP3-201ENST00000338399 FGFR2P21802 821 aa17.96■□□□□ 0.47
CDK5RAP3-201ENST00000338399 CRY2Q49AN0 593 aa17.96■□□□□ 0.47
CDK5RAP3-201ENST00000338399 EVI5LQ96CN4 794 aa17.96■□□□□ 0.47
CDK5RAP3-201ENST00000338399 UPF2Q9HAU5 1272 aaKnown RBP17.96■□□□□ 0.47
CDK5RAP3-201ENST00000338399 MINPP1Q9UNW1 487 aa17.96■□□□□ 0.47
CDK5RAP3-201ENST00000338399 CHMLP26374 656 aa17.95■□□□□ 0.46
CDK5RAP3-201ENST00000338399 CCDC158Q5M9N0 1113 aa17.95■□□□□ 0.46
CDK5RAP3-201ENST00000338399 LPIN2Q92539 896 aa17.95■□□□□ 0.46
CDK5RAP3-201ENST00000338399 NDUFB9Q9Y6M9 179 aa17.95■□□□□ 0.46
CDK5RAP3-201ENST00000338399 GRAPQ13588 217 aa17.95■□□□□ 0.46
CDK5RAP3-201ENST00000338399 TTC39AQ5SRH9 613 aa17.95■□□□□ 0.46
CDK5RAP3-201ENST00000338399 GRAPLQ8TC17 118 aaPredicted RBP17.95■□□□□ 0.46
CDK5RAP3-201ENST00000338399 DNAJC2Q99543 621 aaKnown RBP17.95■□□□□ 0.46
CDK5RAP3-201ENST00000338399 ARAP2Q8WZ64 1704 aa17.94■□□□□ 0.46
CDK5RAP3-201ENST00000338399 IFIT1P09914 478 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-201ENST00000338399 SLC5A1P13866 664 aa17.94■□□□□ 0.46
CDK5RAP3-201ENST00000338399 EDC3Q96F86 508 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-201ENST00000338399 HAUS7Q99871 368 aa17.94■□□□□ 0.46
CDK5RAP3-201ENST00000338399 BRIP1Q9BX63 1249 aa17.94■□□□□ 0.46
CDK5RAP3-201ENST00000338399 KLRG2A4D1S0 409 aaPredicted RBP17.93■□□□□ 0.46
CDK5RAP3-201ENST00000338399 RBM17Q96I25 401 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-201ENST00000338399 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.92■□□□□ 0.46
CDK5RAP3-201ENST00000338399 UPF1Q92900 1129 aaKnown RBP eCLIP17.92■□□□□ 0.46
CDK5RAP3-201ENST00000338399 HOXA10P31260 410 aaPredicted RBP17.91■□□□□ 0.46
CDK5RAP3-201ENST00000338399 WTIPA6NIX2 430 aaPredicted RBP17.9■□□□□ 0.46
CDK5RAP3-201ENST00000338399 CCDC102BQ68D86 513 aa17.9■□□□□ 0.46
CDK5RAP3-201ENST00000338399 ESYT1Q9BSJ8 1104 aa17.9■□□□□ 0.46
CDK5RAP3-201ENST00000338399 FSD1Q9BTV5 496 aa17.9■□□□□ 0.46
CDK5RAP3-201ENST00000338399 EIF5BO60841 1220 aaKnown RBP17.9■□□□□ 0.46
CDK5RAP3-201ENST00000338399 PDE6BP35913 854 aa17.9■□□□□ 0.46
CDK5RAP3-201ENST00000338399 PHKA1P46020 1223 aa17.9■□□□□ 0.46
CDK5RAP3-201ENST00000338399 UBE4AQ14139 1066 aa17.9■□□□□ 0.46
CDK5RAP3-201ENST00000338399 SCARF1Q14162 830 aa17.9■□□□□ 0.46
CDK5RAP3-201ENST00000338399 TBC1D32Q96NH3 1257 aa17.9■□□□□ 0.46
CDK5RAP3-201ENST00000338399 CRAMP1Q96RY5 1269 aa17.9■□□□□ 0.46
CDK5RAP3-201ENST00000338399 C22orf23Q9BZE7 217 aa17.9■□□□□ 0.46
CDK5RAP3-201ENST00000338399 ANKRD2Q9GZV1 360 aa17.9■□□□□ 0.46
CDK5RAP3-201ENST00000338399 SNRKQ9NRH2 765 aa17.9■□□□□ 0.46
CDK5RAP3-201ENST00000338399 PAG1Q9NWQ8 432 aa17.9■□□□□ 0.46
CDK5RAP3-201ENST00000338399 AKAP11Q9UKA4 1901 aa17.89■□□□□ 0.46
CDK5RAP3-201ENST00000338399 GOLIM4O00461 696 aa17.89■□□□□ 0.45
CDK5RAP3-201ENST00000338399 FKBP4Q02790 459 aaKnown RBP eCLIP17.89■□□□□ 0.45
CDK5RAP3-201ENST00000338399 SLC51AQ86UW1 340 aa17.89■□□□□ 0.45
CDK5RAP3-201ENST00000338399 DIAPH3Q9NSV4 1193 aa17.89■□□□□ 0.45
CDK5RAP3-201ENST00000338399 SRGNP10124 158 aa17.88■□□□□ 0.45
CDK5RAP3-201ENST00000338399 SLC16A10Q8TF71 515 aa17.88■□□□□ 0.45
CDK5RAP3-201ENST00000338399 ZNF512BQ96KM6 892 aaPredicted RBP17.88■□□□□ 0.45
CDK5RAP3-201ENST00000338399 COL11A2P13942 1736 aaPredicted RBP17.88■□□□□ 0.45
CDK5RAP3-201ENST00000338399 BBOX1O75936 387 aa17.88■□□□□ 0.45
CDK5RAP3-201ENST00000338399 ANP32AP39687 249 aaKnown RBP17.88■□□□□ 0.45
CDK5RAP3-201ENST00000338399 MCAMP43121 646 aa17.88■□□□□ 0.45
CDK5RAP3-201ENST00000338399 KCNJ4P48050 445 aa17.88■□□□□ 0.45
CDK5RAP3-201ENST00000338399 CWC27Q6UX04 472 aaKnown RBP17.88■□□□□ 0.45
CDK5RAP3-201ENST00000338399 UQCRFS1P1P0C7P4 283 aa17.87■□□□□ 0.45
CDK5RAP3-201ENST00000338399 ARID4AP29374 1257 aaPredicted RBP17.87■□□□□ 0.45
CDK5RAP3-201ENST00000338399 ZAP70P43403 619 aa17.87■□□□□ 0.45
CDK5RAP3-201ENST00000338399 BCAMP50895 628 aa17.87■□□□□ 0.45
CDK5RAP3-201ENST00000338399 PI16Q6UXB8 463 aa17.87■□□□□ 0.45
CDK5RAP3-201ENST00000338399 IL25Q9H293 177 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms