RNA–Protein interactions for RNA: ENST00000337907.7

RERE-201, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 8,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-201ENST00000337907 OGFOD1Q8N543 542 aa14.43□□□□□ -0.1
RERE-201ENST00000337907 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.43□□□□□ -0.12e-6■■□□□ 13
RERE-201ENST00000337907 UVSSAQ2YD98 709 aa14.43□□□□□ -0.1
RERE-201ENST00000337907 MPRIPQ6WCQ1 1025 aa14.43□□□□□ -0.1
RERE-201ENST00000337907 MIPOL1Q8TD10 442 aa14.43□□□□□ -0.1
RERE-201ENST00000337907 PRDM10Q9NQV6 1147 aa14.43□□□□□ -0.1
RERE-201ENST00000337907 PTPRCP08575 1304 aa14.43□□□□□ -0.1
RERE-201ENST00000337907 GJB2P29033 226 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 VCX3BQ9H321 246 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 CASQ2O14958 399 aaPredicted RBP14.42□□□□□ -0.1
RERE-201ENST00000337907 RFC4P35249 363 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 GPR161Q8N6U8 529 aaKnown RBP14.42□□□□□ -0.1
RERE-201ENST00000337907 ATP6V0A2Q9Y487 856 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 SPDYE3A6NKU9 549 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 TMEM57Q8N5G2 664 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 SMARCA4P51532 1647 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 BIRC2Q13490 618 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 RRAGBQ5VZM2 374 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 MTUS1Q9ULD2 1270 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 WTAPQ15007 396 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 USH1CQ9Y6N9 552 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 KRT86O43790 486 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 TUBB4AP04350 444 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 PLS1Q14651 629 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 MICU3Q86XE3 530 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 CLGNO14967 610 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 STK10O94804 968 aaKnown RBP14.42□□□□□ -0.1
RERE-201ENST00000337907 RFX1P22670 979 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 GJC1P36383 396 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 ZNF622Q969S3 477 aaKnown RBP eCLIP14.42□□□□□ -0.17e-7■■□□□ 13.4
RERE-201ENST00000337907 PRIMPOLQ96LW4 560 aa14.42□□□□□ -0.1
RERE-201ENST00000337907 GOLGA1Q92805 767 aa14.41□□□□□ -0.1
RERE-201ENST00000337907 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.41□□□□□ -0.1
RERE-201ENST00000337907 LACTBP83111 547 aaPredicted RBP14.41□□□□□ -0.1
RERE-201ENST00000337907 ATP11AP98196 1134 aa14.41□□□□□ -0.1
RERE-201ENST00000337907 INF2Q27J81 1249 aa14.41□□□□□ -0.1
RERE-201ENST00000337907 KCNG4Q8TDN1 519 aa14.41□□□□□ -0.1
RERE-201ENST00000337907 KMT5BQ4FZB7 885 aa14.41□□□□□ -0.1
RERE-201ENST00000337907 SRGAP1Q7Z6B7 1085 aa14.41□□□□□ -0.1
RERE-201ENST00000337907 KRT222Q8N1A0 295 aa14.41□□□□□ -0.1
RERE-201ENST00000337907 ZNF219Q9P2Y4 722 aaPredicted RBP14.41□□□□□ -0.1
RERE-201ENST00000337907 AKNAQ7Z591 1439 aa14.41□□□□□ -0.1
RERE-201ENST00000337907 SMARCC2Q8TAQ2 1214 aa14.41□□□□□ -0.1
RERE-201ENST00000337907 RSRC1Q96IZ7 334 aaKnown RBP14.41□□□□□ -0.1
RERE-201ENST00000337907 CCDC114Q96M63 670 aa14.41□□□□□ -0.1
RERE-201ENST00000337907 EHBP1L1Q8N3D4 1523 aa14.41□□□□□ -0.1
RERE-201ENST00000337907 UQCRFS1P1P0C7P4 283 aa14.41□□□□□ -0.1
RERE-201ENST00000337907 CCDC152Q4G0S7 254 aa14.41□□□□□ -0.1
RERE-201ENST00000337907 CCDC89Q8N998 374 aa14.41□□□□□ -0.1
RERE-201ENST00000337907 PPFIBP2Q8ND30 876 aa14.41□□□□□ -0.1
RERE-201ENST00000337907 FAM212AQ96EL1 285 aa14.41□□□□□ -0.1
RERE-201ENST00000337907 SRRTQ9BXP5 876 aaKnown RBP14.41□□□□□ -0.1
RERE-201ENST00000337907 E7EVH7 732 aa14.41□□□□□ -0.1
RERE-201ENST00000337907 NUF2Q9BZD4 464 aa14.41□□□□□ -0.1
RERE-201ENST00000337907 KIFAP3Q92845 792 aa14.4□□□□□ -0.1
RERE-201ENST00000337907 ZNF165P49910 485 aa14.4□□□□□ -0.1
RERE-201ENST00000337907 ABCC11Q96J66 1382 aa14.4□□□□□ -0.1
RERE-201ENST00000337907 CPLX4Q7Z7G2 160 aa14.4□□□□□ -0.1
RERE-201ENST00000337907 ZC3H6P61129 1189 aaKnown RBP14.4□□□□□ -0.1
RERE-201ENST00000337907 CLUL1Q15846 466 aa14.4□□□□□ -0.1
RERE-201ENST00000337907 SLC12A5Q9H2X9 1139 aa14.4□□□□□ -0.1
RERE-201ENST00000337907 AGTPBP1Q9UPW5 1226 aa14.4□□□□□ -0.1
RERE-201ENST00000337907 FYB2Q5VWT5 728 aa14.4□□□□□ -0.1
RERE-201ENST00000337907 KIFC2Q96AC6 838 aa14.4□□□□□ -0.1
RERE-201ENST00000337907 STX8Q9UNK0 236 aa14.4□□□□□ -0.1
RERE-201ENST00000337907 FAM135AQ9P2D6 1515 aa14.4□□□□□ -0.1
RERE-201ENST00000337907 CALM1P0DP23 149 aa14.4□□□□□ -0.1
RERE-201ENST00000337907 CALM2P0DP24 149 aa14.4□□□□□ -0.1
RERE-201ENST00000337907 CALM3P0DP25 149 aa14.4□□□□□ -0.1
RERE-201ENST00000337907 HEATR3Q7Z4Q2 680 aa14.4□□□□□ -0.1
RERE-201ENST00000337907 NEK11Q8NG66 645 aa14.39□□□□□ -0.11
RERE-201ENST00000337907 IFT74Q96LB3 600 aa14.39□□□□□ -0.11
RERE-201ENST00000337907 VCXQ9H320 206 aa14.39□□□□□ -0.11
RERE-201ENST00000337907 ORC3Q9UBD5 711 aaPredicted RBP14.39□□□□□ -0.11
RERE-201ENST00000337907 CACNA2D3Q8IZS8 1091 aa14.39□□□□□ -0.11
RERE-201ENST00000337907 NKTRP30414 1462 aaKnown RBP14.39□□□□□ -0.11
RERE-201ENST00000337907 GSDMBQ8TAX9 411 aa14.39□□□□□ -0.11
RERE-201ENST00000337907 RIOK3O14730 519 aaKnown RBP14.39□□□□□ -0.11
RERE-201ENST00000337907 TMPOP42166 694 aaKnown RBP14.39□□□□□ -0.11
RERE-201ENST00000337907 SEL1L2Q5TEA6 688 aa14.39□□□□□ -0.11
RERE-201ENST00000337907 NCOA2Q15596 1464 aa14.39□□□□□ -0.11
RERE-201ENST00000337907 RAB11FIP4Q86YS3 637 aa14.39□□□□□ -0.11
RERE-201ENST00000337907 ESR2Q92731 530 aa14.39□□□□□ -0.11
RERE-201ENST00000337907 DBF4Q9UBU7 674 aaPredicted RBP14.39□□□□□ -0.11
RERE-201ENST00000337907 NSD3Q9BZ95 1437 aa14.39□□□□□ -0.11
RERE-201ENST00000337907 LRRC9Q6ZRR7 1453 aa14.39□□□□□ -0.11
RERE-201ENST00000337907 SH2D4BQ5SQS7 431 aa14.39□□□□□ -0.11
RERE-201ENST00000337907 INTS8Q75QN2 995 aaKnown RBP14.39□□□□□ -0.11
RERE-201ENST00000337907 HS2ST1Q7LGA3 356 aa14.39□□□□□ -0.11
RERE-201ENST00000337907 CCDC65Q8IXS2 484 aa14.39□□□□□ -0.11
RERE-201ENST00000337907 NEK1Q96PY6 1258 aa14.39□□□□□ -0.11
RERE-201ENST00000337907 RBM27Q9P2N5 1060 aaKnown RBP14.39□□□□□ -0.11
RERE-201ENST00000337907 CAMSAP2Q08AD1 1489 aa14.38□□□□□ -0.11
RERE-201ENST00000337907 GBP7Q8N8V2 638 aaPredicted RBP14.38□□□□□ -0.11
RERE-201ENST00000337907 C9orf84Q5VXU9 1444 aa14.38□□□□□ -0.11
RERE-201ENST00000337907 CCDC8Q9H0W5 538 aaPredicted RBP14.38□□□□□ -0.11
RERE-201ENST00000337907 KCNK9Q9NPC2 374 aa14.38□□□□□ -0.11
RERE-201ENST00000337907 CLEC11AQ9Y240 323 aa14.38□□□□□ -0.11
RERE-201ENST00000337907 ZSWIM4Q9H7M6 989 aa14.38□□□□□ -0.11
RERE-201ENST00000337907 ARFGAP2Q8N6H7 521 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms