RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 OTUD7BQ6GQQ9 843 aa15.2■□□□□ 0.02
COL2A1-201ENST00000337299 DDX46Q7L014 1031 aaKnown RBP15.2■□□□□ 0.02
COL2A1-201ENST00000337299 CEP112Q8N8E3 955 aa15.2■□□□□ 0.02
COL2A1-201ENST00000337299 KCNF1Q9H3M0 494 aa15.2■□□□□ 0.02
COL2A1-201ENST00000337299 POLKQ9UBT6 870 aa15.2■□□□□ 0.02
COL2A1-201ENST00000337299 JRKLQ9Y4A0 524 aa15.2■□□□□ 0.02
COL2A1-201ENST00000337299 CCDC85AQ96PX6 553 aaPredicted RBP15.2■□□□□ 0.02
COL2A1-201ENST00000337299 PDE11AQ9HCR9 933 aa15.2■□□□□ 0.02
COL2A1-201ENST00000337299 TRIM66O15016 1216 aa15.19■□□□□ 0.02
COL2A1-201ENST00000337299 FAM160A1Q05DH4 1040 aa15.19■□□□□ 0.02
COL2A1-201ENST00000337299 GOLGA8FQ08AF8 430 aa15.19■□□□□ 0.02
COL2A1-201ENST00000337299 GOLGA8DPQ0D2H9 430 aa15.19■□□□□ 0.02
COL2A1-201ENST00000337299 APOBRQ0VD83 1088 aa15.19■□□□□ 0.02
COL2A1-201ENST00000337299 DESI2Q9BSY9 194 aa15.19■□□□□ 0.02
COL2A1-201ENST00000337299 EPC1Q9H2F5 836 aa15.19■□□□□ 0.02
COL2A1-201ENST00000337299 PRDM11Q9NQV5 511 aa15.19■□□□□ 0.02
COL2A1-201ENST00000337299 U3KPZ7 1027 aaPredicted RBP15.19■□□□□ 0.02
COL2A1-201ENST00000337299 TUBB4AP04350 444 aa15.19■□□□□ 0.02
COL2A1-201ENST00000337299 ENOX2Q16206 610 aaKnown RBP15.19■□□□□ 0.02
COL2A1-201ENST00000337299 TOM1L2Q6ZVM7 507 aa15.19■□□□□ 0.02
COL2A1-201ENST00000337299 MICALCLQ6ZW33 695 aa15.19■□□□□ 0.02
COL2A1-201ENST00000337299 GUCA1BQ9UMX6 200 aa15.19■□□□□ 0.02
COL2A1-201ENST00000337299 SPTLC2O15270 562 aa15.19■□□□□ 0.02
COL2A1-201ENST00000337299 AFAP1L1Q8TED9 768 aa15.19■□□□□ 0.02
COL2A1-201ENST00000337299 CUL4AQ13619 759 aa15.18■□□□□ 0.02
COL2A1-201ENST00000337299 HLTFQ14527 1009 aaKnown RBP eCLIP15.18■□□□□ 0.02
COL2A1-201ENST00000337299 MAATS1Q7Z4T9 603 aa15.18■□□□□ 0.02
COL2A1-201ENST00000337299 TRIM22Q8IYM9 498 aa15.18■□□□□ 0.02
COL2A1-201ENST00000337299 N4BP3O15049 544 aa15.18■□□□□ 0.02
COL2A1-201ENST00000337299 ERLIN2O94905 339 aa15.18■□□□□ 0.02
COL2A1-201ENST00000337299 LONRF3Q496Y0 759 aa15.18■□□□□ 0.02
COL2A1-201ENST00000337299 NPC1L1Q9UHC9 1359 aa15.18■□□□□ 0.02
COL2A1-201ENST00000337299 PTPDC1A2A3K4 754 aa15.18■□□□□ 0.02
COL2A1-201ENST00000337299 MCM3P25205 808 aa15.18■□□□□ 0.02
COL2A1-201ENST00000337299 CLEC17AQ6ZS10 378 aa15.18■□□□□ 0.02
COL2A1-201ENST00000337299 HINFPQ9BQA5 517 aa15.18■□□□□ 0.02
COL2A1-201ENST00000337299 MORC2Q9Y6X9 1032 aaPredicted RBP15.18■□□□□ 0.02
COL2A1-201ENST00000337299 ITSN2Q9NZM3 1697 aa15.18■□□□□ 0.02
COL2A1-201ENST00000337299 DNMT1P26358 1616 aaKnown RBP15.18■□□□□ 0.02
COL2A1-201ENST00000337299 INPP5BP32019 993 aa15.17■□□□□ 0.02
COL2A1-201ENST00000337299 PIP4K2AP48426 406 aaPredicted RBP15.17■□□□□ 0.02
COL2A1-201ENST00000337299 NAA25Q14CX7 972 aa15.17■□□□□ 0.02
COL2A1-201ENST00000337299 GOLGA5Q8TBA6 731 aa15.17■□□□□ 0.02
COL2A1-201ENST00000337299 CCDC113Q9H0I3 377 aa15.17■□□□□ 0.02
COL2A1-201ENST00000337299 NCOA5Q9HCD5 579 aaKnown RBP15.17■□□□□ 0.02
COL2A1-201ENST00000337299 FAM227BQ96M60 508 aa15.17■□□□□ 0.02
COL2A1-201ENST00000337299 MBD5Q9P267 1494 aa15.17■□□□□ 0.02
COL2A1-201ENST00000337299 AFMP43652 599 aa15.17■□□□□ 0.02
COL2A1-201ENST00000337299 MPRIPQ6WCQ1 1025 aa15.17■□□□□ 0.02
COL2A1-201ENST00000337299 C11orf57Q6ZUT1 292 aaPredicted RBP15.17■□□□□ 0.02
COL2A1-201ENST00000337299 XBP1P17861 261 aa15.17■□□□□ 0.02
COL2A1-201ENST00000337299 FAM76AQ8TAV0 307 aa15.17■□□□□ 0.02
COL2A1-201ENST00000337299 TANGO6Q9C0B7 1094 aa15.17■□□□□ 0.02
COL2A1-201ENST00000337299 LOC102724159A0A0B4J2E5 919 aa15.16■□□□□ 0.02
COL2A1-201ENST00000337299 MTX1Q13505 466 aa15.16■□□□□ 0.02
COL2A1-201ENST00000337299 PWP2Q15269 919 aaKnown RBP15.16■□□□□ 0.02
COL2A1-201ENST00000337299 CCDC144BQ3MJ40 725 aa15.16■□□□□ 0.02
COL2A1-201ENST00000337299 NDUFAB1O14561 156 aa15.16■□□□□ 0.02
COL2A1-201ENST00000337299 SLFN14P0C7P3 912 aa15.16■□□□□ 0.02
COL2A1-201ENST00000337299 PPP1R13BQ96KQ4 1090 aa15.16■□□□□ 0.02
COL2A1-201ENST00000337299 GNAT3A8MTJ3 354 aa15.16■□□□□ 0.02
COL2A1-201ENST00000337299 GOLIM4O00461 696 aa15.16■□□□□ 0.02
COL2A1-201ENST00000337299 CYP2E1P05181 493 aaPredicted RBP15.16■□□□□ 0.02
COL2A1-201ENST00000337299 MICU3Q86XE3 530 aa15.16■□□□□ 0.02
COL2A1-201ENST00000337299 KCNG4Q8TDN1 519 aa15.16■□□□□ 0.02
COL2A1-201ENST00000337299 ANKRD7Q92527 254 aa15.16■□□□□ 0.02
COL2A1-201ENST00000337299 NSD2O96028 1365 aa15.16■□□□□ 0.02
COL2A1-201ENST00000337299 LARGE1O95461 756 aa15.15■□□□□ 0.02
COL2A1-201ENST00000337299 YEATS4O95619 227 aa15.15■□□□□ 0.02
COL2A1-201ENST00000337299 PAFAH1B1P43034 410 aa15.15■□□□□ 0.02
COL2A1-201ENST00000337299 ADKP55263 362 aaKnown RBP15.15■□□□□ 0.02
COL2A1-201ENST00000337299 MYL5Q02045 173 aa15.15■□□□□ 0.02
COL2A1-201ENST00000337299 SF3A3Q12874 501 aaKnown RBP eCLIP15.15■□□□□ 0.021e-7■■■□□ 16.1
COL2A1-201ENST00000337299 SNRKQ9NRH2 765 aa15.15■□□□□ 0.02
COL2A1-201ENST00000337299 ABCC10Q5T3U5 1492 aa15.15■□□□□ 0.02
COL2A1-201ENST00000337299 TNRQ92752 1358 aa15.15■□□□□ 0.02
COL2A1-201ENST00000337299 TATP17735 454 aaPredicted RBP15.15■□□□□ 0.02
COL2A1-201ENST00000337299 SPA17Q15506 151 aa15.15■□□□□ 0.02
COL2A1-201ENST00000337299 IMMTQ16891 758 aaKnown RBP15.15■□□□□ 0.02
COL2A1-201ENST00000337299 BRMS1Q9HCU9 246 aa15.15■□□□□ 0.02
COL2A1-201ENST00000337299 SYCP1Q15431 976 aa15.15■□□□□ 0.02
COL2A1-201ENST00000337299 ADCK5Q3MIX3 580 aa15.15■□□□□ 0.02
COL2A1-201ENST00000337299 GPR161Q8N6U8 529 aaKnown RBP15.15■□□□□ 0.02
COL2A1-201ENST00000337299 TDRD7Q8NHU6 1098 aaKnown RBP15.15■□□□□ 0.02
COL2A1-201ENST00000337299 MRFAP1L1Q96HT8 127 aa15.15■□□□□ 0.02
COL2A1-201ENST00000337299 CCDC114Q96M63 670 aa15.15■□□□□ 0.02
COL2A1-201ENST00000337299 SOS1Q07889 1333 aaPredicted RBP15.15■□□□□ 0.02
COL2A1-201ENST00000337299 NUTM2BA6NNL0 878 aaPredicted RBP15.14■□□□□ 0.02
COL2A1-201ENST00000337299 NUTM2EB1AL46 878 aaPredicted RBP15.14■□□□□ 0.02
COL2A1-201ENST00000337299 ACTN2P35609 894 aa15.14■□□□□ 0.02
COL2A1-201ENST00000337299 DDIT3P35638 169 aa15.14■□□□□ 0.02
COL2A1-201ENST00000337299 ICE2Q659A1 982 aa15.14■□□□□ 0.02
COL2A1-201ENST00000337299 NUTM2AQ8IVF1 878 aaPredicted RBP15.14■□□□□ 0.02
COL2A1-201ENST00000337299 KLF18A0A0U1RQI7 1052 aa15.14■□□□□ 0.01
COL2A1-201ENST00000337299 PTH1RQ03431 593 aa15.14■□□□□ 0.01
COL2A1-201ENST00000337299 TPCN1Q9ULQ1 816 aa15.14■□□□□ 0.01
COL2A1-201ENST00000337299 BTBD11A6QL63 1104 aa15.14■□□□□ 0.01
COL2A1-201ENST00000337299 PTCD1O75127 700 aaKnown RBP15.14■□□□□ 0.01
COL2A1-201ENST00000337299 TTC39AQ5SRH9 613 aa15.14■□□□□ 0.01
COL2A1-201ENST00000337299 MEX3CQ5U5Q3 659 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms