RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 CALML3P27482 149 aa14.86□□□□□ -0.03
HLCS-201ENST00000336648 NUCB1Q02818 461 aa14.86□□□□□ -0.03
HLCS-201ENST00000336648 KRT86O43790 486 aa14.86□□□□□ -0.03
HLCS-201ENST00000336648 MPRIPQ6WCQ1 1025 aa14.86□□□□□ -0.03
HLCS-201ENST00000336648 TMX1Q9H3N1 280 aa14.86□□□□□ -0.03
HLCS-201ENST00000336648 PUF60Q9UHX1 559 aaKnown RBP14.86□□□□□ -0.03
HLCS-201ENST00000336648 SAMM50Q9Y512 469 aa14.86□□□□□ -0.03
HLCS-201ENST00000336648 KIAA0586Q9BVV6 1533 aa14.86□□□□□ -0.03
HLCS-201ENST00000336648 KLF18A0A0U1RQI7 1052 aa14.86□□□□□ -0.03
HLCS-201ENST00000336648 C6orf229H3BNL8 230 aa14.86□□□□□ -0.03
HLCS-201ENST00000336648 CEP57Q86XR8 500 aa14.86□□□□□ -0.03
HLCS-201ENST00000336648 TMX3Q96JJ7 454 aa14.86□□□□□ -0.03
HLCS-201ENST00000336648 PAIP2Q9BPZ3 127 aaKnown RBP14.86□□□□□ -0.03
HLCS-201ENST00000336648 SARNPP82979 210 aaKnown RBP14.86□□□□□ -0.03
HLCS-201ENST00000336648 RTN1Q16799 776 aa14.86□□□□□ -0.03
HLCS-201ENST00000336648 RHPN1Q8TCX5 695 aa14.86□□□□□ -0.03
HLCS-201ENST00000336648 SNX21Q969T3 373 aa14.86□□□□□ -0.03
HLCS-201ENST00000336648 SKILP12757 684 aa14.85□□□□□ -0.03
HLCS-201ENST00000336648 MSANTD4Q8NCY6 345 aa14.85□□□□□ -0.03
HLCS-201ENST00000336648 SYNCQ9H7C4 482 aa14.85□□□□□ -0.03
HLCS-201ENST00000336648 CCDC129Q6ZRS4 1044 aa14.85□□□□□ -0.03
HLCS-201ENST00000336648 ALG1Q9BT22 464 aa14.85□□□□□ -0.03
HLCS-201ENST00000336648 CTAGE9A4FU28 777 aa14.85□□□□□ -0.03
HLCS-201ENST00000336648 GNAT2P19087 354 aa14.85□□□□□ -0.03
HLCS-201ENST00000336648 PPP1R2P41236 205 aa14.85□□□□□ -0.03
HLCS-201ENST00000336648 IMPG2Q9BZV3 1241 aa14.85□□□□□ -0.03
HLCS-201ENST00000336648 RTL9Q8NET4 1388 aa14.85□□□□□ -0.03
HLCS-201ENST00000336648 TPD52P55327 224 aaPredicted RBP14.85□□□□□ -0.03
HLCS-201ENST00000336648 WDR78Q5VTH9 848 aa14.85□□□□□ -0.03
HLCS-201ENST00000336648 GBP6Q6ZN66 633 aa14.85□□□□□ -0.03
HLCS-201ENST00000336648 APBB1IPQ7Z5R6 666 aaPredicted RBP14.85□□□□□ -0.03
HLCS-201ENST00000336648 CEP120Q8N960 986 aa14.85□□□□□ -0.03
HLCS-201ENST00000336648 GOLGA1Q92805 767 aa14.85□□□□□ -0.03
HLCS-201ENST00000336648 NAP1L4Q99733 375 aaKnown RBP14.85□□□□□ -0.03
HLCS-201ENST00000336648 FEZ2Q9UHY8 353 aaPredicted RBP14.85□□□□□ -0.03
HLCS-201ENST00000336648 FAM184BQ9ULE4 1060 aa14.85□□□□□ -0.03
HLCS-201ENST00000336648 PPM1FP49593 454 aaPredicted RBP14.84□□□□□ -0.03
HLCS-201ENST00000336648 ATL3Q6DD88 541 aa14.84□□□□□ -0.03
HLCS-201ENST00000336648 EMILIN1Q9Y6C2 1016 aa14.84□□□□□ -0.03
HLCS-201ENST00000336648 TOP2BQ02880 1626 aa14.84□□□□□ -0.03
HLCS-201ENST00000336648 RAPGEF3O95398 923 aa14.84□□□□□ -0.03
HLCS-201ENST00000336648 LIG1P18858 919 aa14.84□□□□□ -0.03
HLCS-201ENST00000336648 IFIT1BQ5T764 474 aaKnown RBP14.84□□□□□ -0.03
HLCS-201ENST00000336648 C20orf194Q5TEA3 1177 aa14.84□□□□□ -0.03
HLCS-201ENST00000336648 KIF5AQ12840 1032 aa14.84□□□□□ -0.03
HLCS-201ENST00000336648 TTLL12Q14166 644 aaPredicted RBP14.84□□□□□ -0.03
HLCS-201ENST00000336648 JAKMIP2Q96AA8 810 aa14.84□□□□□ -0.03
HLCS-201ENST00000336648 MAGI1Q96QZ7 1491 aaPredicted RBP14.84□□□□□ -0.03
HLCS-201ENST00000336648 SLU7O95391 586 aaKnown RBP14.83□□□□□ -0.03
HLCS-201ENST00000336648 NOLC1Q14978 699 aaKnown RBP eCLIP14.83□□□□□ -0.03
HLCS-201ENST00000336648 MCMDC2Q4G0Z9 681 aa14.83□□□□□ -0.03
HLCS-201ENST00000336648 CEP128Q6ZU80 1094 aa14.83□□□□□ -0.03
HLCS-201ENST00000336648 BRF1Q92994 677 aa14.83□□□□□ -0.03
HLCS-201ENST00000336648 TSPY3P0CV98 308 aa14.83□□□□□ -0.04
HLCS-201ENST00000336648 TSPY8P0CW00 308 aa14.83□□□□□ -0.04
HLCS-201ENST00000336648 HCLS1P14317 486 aaPredicted RBP14.83□□□□□ -0.04
HLCS-201ENST00000336648 ST5P78524 1137 aa14.83□□□□□ -0.04
HLCS-201ENST00000336648 C6orf50Q9HD87 102 aa14.83□□□□□ -0.04
HLCS-201ENST00000336648 IL15P40933 162 aaPredicted RBP14.83□□□□□ -0.04
HLCS-201ENST00000336648 WAPLQ7Z5K2 1190 aa14.83□□□□□ -0.04
HLCS-201ENST00000336648 GDPD2Q9HCC8 539 aa14.83□□□□□ -0.04
HLCS-201ENST00000336648 ZBTB3Q9H5J0 574 aa14.82□□□□□ -0.04
HLCS-201ENST00000336648 ATP2A2P16615 1042 aaKnown RBP14.82□□□□□ -0.04
HLCS-201ENST00000336648 VAT1LQ9HCJ6 419 aa14.82□□□□□ -0.04
HLCS-201ENST00000336648 MBIPQ9NS73 344 aa14.82□□□□□ -0.04
HLCS-201ENST00000336648 CLCN1P35523 988 aa14.82□□□□□ -0.04
HLCS-201ENST00000336648 ANO6Q4KMQ2 910 aa14.82□□□□□ -0.04
HLCS-201ENST00000336648 UBE3BQ7Z3V4 1068 aa14.82□□□□□ -0.04
HLCS-201ENST00000336648 SNAPC4Q5SXM2 1469 aa14.82□□□□□ -0.04
HLCS-201ENST00000336648 TTC41PQ6P2S7 1318 aa14.82□□□□□ -0.04
HLCS-201ENST00000336648 TRIM75PA6NK02 468 aa14.82□□□□□ -0.04
HLCS-201ENST00000336648 PHACTR2O75167 634 aa14.82□□□□□ -0.04
HLCS-201ENST00000336648 ALDH3A1P30838 453 aa14.82□□□□□ -0.04
HLCS-201ENST00000336648 ANKRD13DQ6ZTN6 518 aa14.82□□□□□ -0.04
HLCS-201ENST00000336648 PI4KAP2A4QPH2 592 aa14.82□□□□□ -0.04
HLCS-201ENST00000336648 PI4KAP1Q8N8J0 262 aa14.82□□□□□ -0.04
HLCS-201ENST00000336648 PANK2Q9BZ23 570 aa14.82□□□□□ -0.04
HLCS-201ENST00000336648 OTUD6BQ8N6M0 293 aa14.81□□□□□ -0.04
HLCS-201ENST00000336648 ATRIPQ8WXE1 791 aa14.81□□□□□ -0.04
HLCS-201ENST00000336648 HDAC9Q9UKV0 1011 aa14.81□□□□□ -0.04
HLCS-201ENST00000336648 A0A1B0GUA9 196 aa14.81□□□□□ -0.04
HLCS-201ENST00000336648 CHMP4BP1P59074 171 aa14.81□□□□□ -0.04
HLCS-201ENST00000336648 ESYT1Q9BSJ8 1104 aa14.81□□□□□ -0.04
HLCS-201ENST00000336648 TSGA10Q9BZW7 698 aa14.81□□□□□ -0.04
HLCS-201ENST00000336648 DNAI1Q9UI46 699 aa14.81□□□□□ -0.04
HLCS-201ENST00000336648 MAP7D1Q3KQU3 841 aa14.81□□□□□ -0.04
HLCS-201ENST00000336648 BRAPQ7Z569 592 aa14.81□□□□□ -0.04
HLCS-201ENST00000336648 STIM2Q9P246 746 aa14.81□□□□□ -0.04
HLCS-201ENST00000336648 MTRF1LQ9UGC7 380 aaKnown RBP14.81□□□□□ -0.04
HLCS-201ENST00000336648 MAP3K1Q13233 1512 aa14.81□□□□□ -0.04
HLCS-201ENST00000336648 TOPBP1Q92547 1522 aa14.81□□□□□ -0.04
HLCS-201ENST00000336648 F13A1P00488 732 aa14.81□□□□□ -0.04
HLCS-201ENST00000336648 PLCG2P16885 1265 aa14.81□□□□□ -0.04
HLCS-201ENST00000336648 NAA25Q14CX7 972 aa14.81□□□□□ -0.04
HLCS-201ENST00000336648 MKRN1Q9UHC7 482 aaKnown RBP14.81□□□□□ -0.04
HLCS-201ENST00000336648 SYNJ1O43426 1573 aa14.81□□□□□ -0.04
HLCS-201ENST00000336648 HAND2P61296 217 aa14.8□□□□□ -0.04
HLCS-201ENST00000336648 TUBB2AQ13885 445 aa14.8□□□□□ -0.04
HLCS-201ENST00000336648 TUBB2BQ9BVA1 445 aa14.8□□□□□ -0.04
HLCS-201ENST00000336648 RAD50Q92878 1312 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms