RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 PLBD2Q8NHP8 589 aa21.06■□□□□ 0.96
IFFO1-201ENST00000336604 TNMDQ9H2S6 317 aa21.06■□□□□ 0.96
IFFO1-201ENST00000336604 ALS2Q96Q42 1657 aa21.06■□□□□ 0.96
IFFO1-201ENST00000336604 STOX1Q6ZVD7 989 aa21.05■□□□□ 0.96
IFFO1-201ENST00000336604 LUZP1Q86V48 1076 aa21.05■□□□□ 0.96
IFFO1-201ENST00000336604 NEUROD6Q96NK8 337 aa21.05■□□□□ 0.96
IFFO1-201ENST00000336604 FAM200AQ8TCP9 573 aa21.05■□□□□ 0.96
IFFO1-201ENST00000336604 KBTBD3Q8NAB2 608 aa21.04■□□□□ 0.96
IFFO1-201ENST00000336604 KIF1AQ12756 1690 aa21.04■□□□□ 0.96
IFFO1-201ENST00000336604 NBPF26B4DH59 902 aa21.04■□□□□ 0.96
IFFO1-201ENST00000336604 GOLIM4O00461 696 aa21.04■□□□□ 0.96
IFFO1-201ENST00000336604 ATF3P18847 181 aa21.04■□□□□ 0.96
IFFO1-201ENST00000336604 TIMM10P62072 90 aa21.04■□□□□ 0.96
IFFO1-201ENST00000336604 FGD1P98174 961 aa21.04■□□□□ 0.96
IFFO1-201ENST00000336604 FOXO4P98177 505 aa21.04■□□□□ 0.96
IFFO1-201ENST00000336604 NBPF14Q5TI25 921 aa21.04■□□□□ 0.96
IFFO1-201ENST00000336604 NBPF10Q6P3W6 841 aaKnown RBP21.04■□□□□ 0.96
IFFO1-201ENST00000336604 NBPF15Q8N660 670 aa21.04■□□□□ 0.96
IFFO1-201ENST00000336604 PGBD1Q96JS3 809 aa21.04■□□□□ 0.96
IFFO1-201ENST00000336604 CCDC94Q9BW85 323 aaPredicted RBP21.04■□□□□ 0.96
IFFO1-201ENST00000336604 NR1I2O75469 434 aa21.03■□□□□ 0.96
IFFO1-201ENST00000336604 SCRN1Q12765 414 aa21.03■□□□□ 0.96
IFFO1-201ENST00000336604 KCNF1Q9H3M0 494 aa21.03■□□□□ 0.96
IFFO1-201ENST00000336604 A0A0U1RQG5 324 aaPredicted RBP21.03■□□□□ 0.96
IFFO1-201ENST00000336604 ATG9AQ7Z3C6 839 aa21.03■□□□□ 0.96
IFFO1-201ENST00000336604 AFDNP55196 1824 aaKnown RBP21.03■□□□□ 0.96
IFFO1-201ENST00000336604 RFX7Q2KHR2 1363 aa21.02■□□□□ 0.96
IFFO1-201ENST00000336604 H3BQV1 296 aa21.02■□□□□ 0.96
IFFO1-201ENST00000336604 IFFO2Q5TF58 517 aa21.02■□□□□ 0.96
IFFO1-201ENST00000336604 TTLL7Q6ZT98 887 aa21.02■□□□□ 0.96
IFFO1-201ENST00000336604 RESTQ13127 1097 aa21.02■□□□□ 0.96
IFFO1-201ENST00000336604 ANO6Q4KMQ2 910 aa21.02■□□□□ 0.96
IFFO1-201ENST00000336604 BICD2Q8TD16 824 aa21.02■□□□□ 0.96
IFFO1-201ENST00000336604 A0A0G2JLW4 131 aa21.01■□□□□ 0.95
IFFO1-201ENST00000336604 ARFGEF2Q9Y6D5 1785 aa21.01■□□□□ 0.95
IFFO1-201ENST00000336604 FOSBP53539 338 aa21.01■□□□□ 0.95
IFFO1-201ENST00000336604 CEBPZQ03701 1054 aaKnown RBP21.01■□□□□ 0.95
IFFO1-201ENST00000336604 PAG1Q9NWQ8 432 aa21.01■□□□□ 0.95
IFFO1-201ENST00000336604 PYCARDQ9ULZ3 195 aa21.01■□□□□ 0.95
IFFO1-201ENST00000336604 PPFIA3O75145 1194 aa21.01■□□□□ 0.95
IFFO1-201ENST00000336604 MYRIPQ8NFW9 859 aa21.01■□□□□ 0.95
IFFO1-201ENST00000336604 DDX19AQ9NUU7 478 aaKnown RBP21.01■□□□□ 0.95
IFFO1-201ENST00000336604 SPTLC3Q9NUV7 552 aa21.01■□□□□ 0.95
IFFO1-201ENST00000336604 SH3TC1Q8TE82 1336 aa21■□□□□ 0.95
IFFO1-201ENST00000336604 H7C1W4 665 aa21■□□□□ 0.95
IFFO1-201ENST00000336604 CBX1P83916 185 aa21■□□□□ 0.95
IFFO1-201ENST00000336604 ZNF594Q96JF6 807 aaPredicted RBP21■□□□□ 0.95
IFFO1-201ENST00000336604 CLSTN2Q9H4D0 955 aa21■□□□□ 0.95
IFFO1-201ENST00000336604 CBX8Q9HC52 389 aa21■□□□□ 0.95
IFFO1-201ENST00000336604 LRRC24Q50LG9 513 aa20.99■□□□□ 0.95
IFFO1-201ENST00000336604 COL18A1P39060 1754 aa20.99■□□□□ 0.95
IFFO1-201ENST00000336604 APOBRQ0VD83 1088 aa20.99■□□□□ 0.95
IFFO1-201ENST00000336604 KIAA1524Q8TCG1 905 aa20.99■□□□□ 0.95
IFFO1-201ENST00000336604 ZBTB3Q9H5J0 574 aa20.99■□□□□ 0.95
IFFO1-201ENST00000336604 A1BGP04217 495 aa20.98■□□□□ 0.95
IFFO1-201ENST00000336604 RBM43Q6ZSC3 357 aaKnown RBP20.98■□□□□ 0.95
IFFO1-201ENST00000336604 DHX32Q7L7V1 743 aaKnown RBP20.98■□□□□ 0.95
IFFO1-201ENST00000336604 FTOQ9C0B1 505 aaKnown RBP eCLIP20.98■□□□□ 0.95
IFFO1-201ENST00000336604 CWC25Q9NXE8 425 aaPredicted RBP20.98■□□□□ 0.95
IFFO1-201ENST00000336604 TMEM94Q12767 1356 aa20.98■□□□□ 0.95
IFFO1-201ENST00000336604 ZNF710Q8N1W2 664 aa20.98■□□□□ 0.95
IFFO1-201ENST00000336604 NSUN7Q8NE18 718 aaKnown RBP20.98■□□□□ 0.95
IFFO1-201ENST00000336604 SMARCC2Q8TAQ2 1214 aa20.98■□□□□ 0.95
IFFO1-201ENST00000336604 ADAMTSL3P82987 1691 aa20.97■□□□□ 0.95
IFFO1-201ENST00000336604 PFKFB2O60825 505 aa20.97■□□□□ 0.95
IFFO1-201ENST00000336604 CCT2P78371 535 aaKnown RBP20.97■□□□□ 0.95
IFFO1-201ENST00000336604 PALLDQ8WX93 1383 aa20.97■□□□□ 0.95
IFFO1-201ENST00000336604 GLI3P10071 1580 aa20.97■□□□□ 0.95
IFFO1-201ENST00000336604 CTDNEP1O95476 244 aa20.97■□□□□ 0.95
IFFO1-201ENST00000336604 CHST3Q7LGC8 479 aa20.97■□□□□ 0.95
IFFO1-201ENST00000336604 NCOA5Q9HCD5 579 aaKnown RBP20.97■□□□□ 0.95
IFFO1-201ENST00000336604 DNAJC25Q9H1X3 360 aa20.96■□□□□ 0.95
IFFO1-201ENST00000336604 ZSCAN16Q9H4T2 348 aaPredicted RBP20.96■□□□□ 0.95
IFFO1-201ENST00000336604 HMGB1P09429 215 aaKnown RBP20.96■□□□□ 0.95
IFFO1-201ENST00000336604 HSPD1P10809 573 aaKnown RBP20.96■□□□□ 0.95
IFFO1-201ENST00000336604 PTGS1P23219 599 aa20.96■□□□□ 0.95
IFFO1-201ENST00000336604 HELLSQ9NRZ9 838 aa20.96■□□□□ 0.95
IFFO1-201ENST00000336604 NAP1L2Q9ULW6 460 aaPredicted RBP20.96■□□□□ 0.95
IFFO1-201ENST00000336604 PTPDC1A2A3K4 754 aa20.95■□□□□ 0.94
IFFO1-201ENST00000336604 GOLGA6L6A8MZA4 724 aa20.95■□□□□ 0.94
IFFO1-201ENST00000336604 ZSCAN20P17040 1043 aaPredicted RBP20.95■□□□□ 0.94
IFFO1-201ENST00000336604 IL15P40933 162 aaPredicted RBP20.95■□□□□ 0.94
IFFO1-201ENST00000336604 ZMYM1Q5SVZ6 1142 aa20.95■□□□□ 0.94
IFFO1-201ENST00000336604 PRIMPOLQ96LW4 560 aa20.95■□□□□ 0.94
IFFO1-201ENST00000336604 DSCC1Q9BVC3 393 aa20.95■□□□□ 0.94
IFFO1-201ENST00000336604 ADD1P35611 737 aaKnown RBP20.95■□□□□ 0.94
IFFO1-201ENST00000336604 DMTNQ08495 405 aa20.95■□□□□ 0.94
IFFO1-201ENST00000336604 PUS3Q9BZE2 481 aaKnown RBP20.95■□□□□ 0.94
IFFO1-201ENST00000336604 CFAP45Q9UL16 551 aa20.95■□□□□ 0.94
IFFO1-201ENST00000336604 MAST3O60307 1309 aa20.95■□□□□ 0.94
IFFO1-201ENST00000336604 A0A1B0GUL7 405 aa20.94■□□□□ 0.94
IFFO1-201ENST00000336604 E7EWF7 191 aa20.94■□□□□ 0.94
IFFO1-201ENST00000336604 ZNF165P49910 485 aa20.94■□□□□ 0.94
IFFO1-201ENST00000336604 LLPHQ9BRT6 129 aaKnown RBP20.94■□□□□ 0.94
IFFO1-201ENST00000336604 IFIT1P09914 478 aaKnown RBP20.94■□□□□ 0.94
IFFO1-201ENST00000336604 EXOSC10Q01780 885 aaKnown RBP20.94■□□□□ 0.94
IFFO1-201ENST00000336604 TNS3Q68CZ2 1445 aa20.94■□□□□ 0.94
IFFO1-201ENST00000336604 EYA2O00167 538 aa20.93■□□□□ 0.94
IFFO1-201ENST00000336604 PPP4R3BQ5MIZ7 849 aa20.93■□□□□ 0.94
IFFO1-201ENST00000336604 TTLL5Q6EMB2 1281 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms