RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 FAM173BQ6P4H8 233 aa15.08■□□□□ 0.01
LIMK1-201ENST00000336180 FERMT3Q86UX7 667 aa15.08■□□□□ 0.01
LIMK1-201ENST00000336180 MAP4K1Q92918 833 aa15.08■□□□□ 0.01
LIMK1-201ENST00000336180 HAUS7Q99871 368 aa15.08■□□□□ 0.01
LIMK1-201ENST00000336180 GOLGA6L3A6NEY3 463 aa15.08■□□□□ 0
LIMK1-201ENST00000336180 INTS5Q6P9B9 1019 aaKnown RBP15.08■□□□□ 0
LIMK1-201ENST00000336180 TPCN1Q9ULQ1 816 aa15.08■□□□□ 0
LIMK1-201ENST00000336180 DISP2A7MBM2 1401 aa15.08■□□□□ 0
LIMK1-201ENST00000336180 TOM1O60784 492 aa15.07■□□□□ 0
LIMK1-201ENST00000336180 PCCAP05165 728 aaPredicted RBP15.07■□□□□ 0
LIMK1-201ENST00000336180 VPS37CA5D8V6 355 aaPredicted RBP15.07■□□□□ 0
LIMK1-201ENST00000336180 KDM4AO75164 1064 aa15.07■□□□□ 0
LIMK1-201ENST00000336180 SLC51AQ86UW1 340 aa15.07■□□□□ 0
LIMK1-201ENST00000336180 NIP7Q9Y221 180 aaKnown RBP eCLIP15.07■□□□□ 0
LIMK1-201ENST00000336180 GOLGA6L22H0YM25 854 aa15.07■□□□□ 0
LIMK1-201ENST00000336180 CYP2E1P05181 493 aaPredicted RBP15.07■□□□□ 0
LIMK1-201ENST00000336180 XRCC6P12956 609 aaKnown RBP eCLIP15.07■□□□□ 0
LIMK1-201ENST00000336180 ST3GAL1Q11201 340 aa15.07■□□□□ 0
LIMK1-201ENST00000336180 TEX13AQ9BXU3 409 aaPredicted RBP15.07■□□□□ 0
LIMK1-201ENST00000336180 LIMCH1Q9UPQ0 1083 aa15.07■□□□□ 0
LIMK1-201ENST00000336180 ABCC6O95255 1503 aa15.07■□□□□ 0
LIMK1-201ENST00000336180 COL16A1Q07092 1604 aaPredicted RBP15.06■□□□□ 0
LIMK1-201ENST00000336180 M0R2C6 588 aa15.06■□□□□ 0
LIMK1-201ENST00000336180 CTSWP56202 376 aa15.06■□□□□ 0
LIMK1-201ENST00000336180 CCDC87Q9NVE4 849 aa15.06■□□□□ 0
LIMK1-201ENST00000336180 GADD45BO75293 160 aaPredicted RBP15.05■□□□□ 0
LIMK1-201ENST00000336180 GPHNQ9NQX3 736 aaPredicted RBP15.05■□□□□ 0
LIMK1-201ENST00000336180 LMBRD1Q9NUN5 540 aa15.05■□□□□ 0
LIMK1-201ENST00000336180 SMC3Q9UQE7 1217 aa15.05■□□□□ 0
LIMK1-201ENST00000336180 CYP21A2P08686 494 aa15.05■□□□□ -0
LIMK1-201ENST00000336180 HSP90B1P14625 803 aaKnown RBP15.05■□□□□ -0
LIMK1-201ENST00000336180 GJB2P29033 226 aa15.05■□□□□ -0
LIMK1-201ENST00000336180 CUL4AQ13619 759 aa15.05■□□□□ -0
LIMK1-201ENST00000336180 ATP2B3Q16720 1220 aa15.05■□□□□ -0
LIMK1-201ENST00000336180 BLOC1S2Q6QNY1 142 aa15.05■□□□□ -0
LIMK1-201ENST00000336180 KBTBD3Q8NAB2 608 aa15.05■□□□□ -0
LIMK1-201ENST00000336180 GPT2Q8TD30 523 aa15.05■□□□□ -0
LIMK1-201ENST00000336180 DDX11Q96FC9 970 aa15.05■□□□□ -0
LIMK1-201ENST00000336180 SPATA31A5Q5VU36 1347 aa15.05■□□□□ -0
LIMK1-201ENST00000336180 SPATA31A7Q8IWB4 1347 aa15.05■□□□□ -0
LIMK1-201ENST00000336180 OSBP2Q969R2 916 aa15.05■□□□□ -0
LIMK1-201ENST00000336180 CWC22Q9HCG8 908 aaKnown RBP15.05■□□□□ -0
LIMK1-201ENST00000336180 MCMDC2Q4G0Z9 681 aa15.04■□□□□ -0
LIMK1-201ENST00000336180 STOX1Q6ZVD7 989 aa15.04■□□□□ -0
LIMK1-201ENST00000336180 SRP68Q9UHB9 627 aaKnown RBP15.04■□□□□ -0
LIMK1-201ENST00000336180 PALLDQ8WX93 1383 aa15.04■□□□□ -0
LIMK1-201ENST00000336180 ANKRD18BA2A2Z9 1011 aa15.04■□□□□ -0
LIMK1-201ENST00000336180 IDH1O75874 414 aaKnown RBP15.04■□□□□ -0
LIMK1-201ENST00000336180 PHF14O94880 888 aa15.04■□□□□ -0
LIMK1-201ENST00000336180 PHKA1P46020 1223 aa15.04■□□□□ -0
LIMK1-201ENST00000336180 C3orf67Q6ZVT6 689 aa15.04■□□□□ -0
LIMK1-201ENST00000336180 ITGB4P16144 1822 aa15.04■□□□□ -0
LIMK1-201ENST00000336180 CCDC158Q5M9N0 1113 aa15.04■□□□□ -0
LIMK1-201ENST00000336180 ZSWIM6Q9HCJ5 1215 aa15.04■□□□□ -0
LIMK1-201ENST00000336180 DENND2AQ9ULE3 1009 aa15.04■□□□□ -0
LIMK1-201ENST00000336180 CNPY2Q9Y2B0 182 aa15.04■□□□□ -0
LIMK1-201ENST00000336180 FIBPO43427 364 aa15.03■□□□□ -0
LIMK1-201ENST00000336180 SYT1P21579 422 aa15.03■□□□□ -0
LIMK1-201ENST00000336180 AMIGO3Q86WK7 504 aa15.03■□□□□ -0
LIMK1-201ENST00000336180 MED23Q9ULK4 1368 aa15.03■□□□□ -0
LIMK1-201ENST00000336180 LAMB4A4D0S4 1761 aa15.03■□□□□ -0
LIMK1-201ENST00000336180 JAK2O60674 1132 aa15.03■□□□□ -0
LIMK1-201ENST00000336180 MCM2P49736 904 aa15.03■□□□□ -0
LIMK1-201ENST00000336180 LINC00116Q8NCU8 138 aa15.03■□□□□ -0
LIMK1-201ENST00000336180 UBR2Q8IWV8 1755 aa15.03■□□□□ -0
LIMK1-201ENST00000336180 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.02■□□□□ -0
LIMK1-201ENST00000336180 HIP1O00291 1037 aa15.02■□□□□ -0
LIMK1-201ENST00000336180 MCAMP43121 646 aa15.02■□□□□ -0
LIMK1-201ENST00000336180 EIF5P55010 431 aaKnown RBP15.02■□□□□ -0
LIMK1-201ENST00000336180 CCT2P78371 535 aaKnown RBP15.02■□□□□ -0
LIMK1-201ENST00000336180 PUS7LQ9H0K6 701 aaKnown RBP15.02■□□□□ -0
LIMK1-201ENST00000336180 MAST3O60307 1309 aa15.02■□□□□ -0
LIMK1-201ENST00000336180 BRD1O95696 1058 aa15.02□□□□□ -0.01
LIMK1-201ENST00000336180 IL6STP40189 918 aaPredicted RBP15.02□□□□□ -0.01
LIMK1-201ENST00000336180 Q6ZUG5 572 aa15.02□□□□□ -0.01
LIMK1-201ENST00000336180 BRF1Q92994 677 aa15.02□□□□□ -0.01
LIMK1-201ENST00000336180 TJP1Q07157 1748 aa15.01□□□□□ -0.01
LIMK1-201ENST00000336180 RPAP1Q9BWH6 1393 aaPredicted RBP15.01□□□□□ -0.01
LIMK1-201ENST00000336180 CSF1RP07333 972 aa15.01□□□□□ -0.01
LIMK1-201ENST00000336180 TOB2Q14106 344 aaPredicted RBP15.01□□□□□ -0.01
LIMK1-201ENST00000336180 INCENPQ9NQS7 918 aa15.01□□□□□ -0.01
LIMK1-201ENST00000336180 JAG2Q9Y219 1238 aa15.01□□□□□ -0.01
LIMK1-201ENST00000336180 RIPOR2Q9Y4F9 1068 aa15.01□□□□□ -0.01
LIMK1-201ENST00000336180 PHLPP1O60346 1717 aa15.01□□□□□ -0.01
LIMK1-201ENST00000336180 NCOA5Q9HCD5 579 aaKnown RBP15.01□□□□□ -0.01
LIMK1-201ENST00000336180 RPS6KB1P23443 525 aa15□□□□□ -0.01
LIMK1-201ENST00000336180 GTF2E1P29083 439 aaPredicted RBP15□□□□□ -0.01
LIMK1-201ENST00000336180 MEX3CQ5U5Q3 659 aaKnown RBP15□□□□□ -0.01
LIMK1-201ENST00000336180 USP21Q9UK80 565 aa15□□□□□ -0.01
LIMK1-201ENST00000336180 LTBP4Q8N2S1 1624 aa15□□□□□ -0.01
LIMK1-201ENST00000336180 COL14A1Q05707 1796 aaKnown RBP15□□□□□ -0.01
LIMK1-201ENST00000336180 CAMTA2O94983 1202 aa15□□□□□ -0.01
LIMK1-201ENST00000336180 APPP05067 770 aa15□□□□□ -0.01
LIMK1-201ENST00000336180 HSPD1P10809 573 aaKnown RBP15□□□□□ -0.01
LIMK1-201ENST00000336180 RNF20Q5VTR2 975 aa15□□□□□ -0.01
LIMK1-201ENST00000336180 RNF214Q8ND24 703 aa15□□□□□ -0.01
LIMK1-201ENST00000336180 NEK1Q96PY6 1258 aa15□□□□□ -0.01
LIMK1-201ENST00000336180 MPHOSPH8Q99549 860 aa15□□□□□ -0.01
LIMK1-201ENST00000336180 NUP188Q5SRE5 1749 aa15□□□□□ -0.01
LIMK1-201ENST00000336180 PDE8AO60658 829 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms