RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 TTC22Q5TAA0 569 aa14.84□□□□□ -0.03
TRIM49B-201ENST00000332682 ANKRD18AQ8IVF6 992 aa14.84□□□□□ -0.03
TRIM49B-201ENST00000332682 BRIP1Q9BX63 1249 aa14.84□□□□□ -0.03
TRIM49B-201ENST00000332682 TLR7Q9NYK1 1049 aaKnown RBP14.84□□□□□ -0.03
TRIM49B-201ENST00000332682 MROH5Q6ZUA9 1318 aa14.84□□□□□ -0.03
TRIM49B-201ENST00000332682 ILDR2Q71H61 639 aa14.83□□□□□ -0.04
TRIM49B-201ENST00000332682 DDX46Q7L014 1031 aaKnown RBP14.83□□□□□ -0.04
TRIM49B-201ENST00000332682 CCDC8Q9H0W5 538 aaPredicted RBP14.83□□□□□ -0.04
TRIM49B-201ENST00000332682 DBNLQ9UJU6 430 aaKnown RBP14.83□□□□□ -0.04
TRIM49B-201ENST00000332682 ARAP2Q8WZ64 1704 aa14.83□□□□□ -0.04
TRIM49B-201ENST00000332682 TTC41PQ6P2S7 1318 aa14.83□□□□□ -0.04
TRIM49B-201ENST00000332682 RPGRQ92834 1020 aaKnown RBP14.82□□□□□ -0.04
TRIM49B-201ENST00000332682 BSDC1Q9NW68 430 aaPredicted RBP14.82□□□□□ -0.04
TRIM49B-201ENST00000332682 A0A1B0GUL7 405 aa14.82□□□□□ -0.04
TRIM49B-201ENST00000332682 PDE8BO95263 885 aa14.82□□□□□ -0.04
TRIM49B-201ENST00000332682 HOXA10P31260 410 aaPredicted RBP14.82□□□□□ -0.04
TRIM49B-201ENST00000332682 RPS8P62241 208 aaKnown RBP14.82□□□□□ -0.04
TRIM49B-201ENST00000332682 GRAPQ13588 217 aa14.82□□□□□ -0.04
TRIM49B-201ENST00000332682 R3HDM1Q15032 1099 aaKnown RBP14.82□□□□□ -0.04
TRIM49B-201ENST00000332682 GRAPLQ8TC17 118 aaPredicted RBP14.82□□□□□ -0.04
TRIM49B-201ENST00000332682 PI4K2BQ8TCG2 481 aa14.82□□□□□ -0.04
TRIM49B-201ENST00000332682 ECHDC1Q9NTX5 307 aa14.82□□□□□ -0.04
TRIM49B-201ENST00000332682 C8orf34Q49A92 452 aa14.81□□□□□ -0.04
TRIM49B-201ENST00000332682 GPATCH3Q96I76 525 aa14.81□□□□□ -0.04
TRIM49B-201ENST00000332682 DBNDD2Q9BQY9 259 aa14.81□□□□□ -0.04
TRIM49B-201ENST00000332682 AKAP2Q9Y2D5 859 aa14.81□□□□□ -0.04
TRIM49B-201ENST00000332682 C10orf71Q711Q0 1435 aa14.8□□□□□ -0.04
TRIM49B-201ENST00000332682 PDE6BP35913 854 aa14.8□□□□□ -0.04
TRIM49B-201ENST00000332682 TIMM10P62072 90 aa14.8□□□□□ -0.04
TRIM49B-201ENST00000332682 CHRNDQ07001 517 aa14.8□□□□□ -0.04
TRIM49B-201ENST00000332682 ATP2B3Q16720 1220 aa14.8□□□□□ -0.04
TRIM49B-201ENST00000332682 GLRX3O76003 335 aaKnown RBP14.79□□□□□ -0.04
TRIM49B-201ENST00000332682 ZBTB7AO95365 584 aa14.79□□□□□ -0.04
TRIM49B-201ENST00000332682 SRGNP10124 158 aa14.79□□□□□ -0.04
TRIM49B-201ENST00000332682 PUM3Q15397 648 aaKnown RBP14.79□□□□□ -0.04
TRIM49B-201ENST00000332682 HELBQ8NG08 1087 aaPredicted RBP14.79□□□□□ -0.04
TRIM49B-201ENST00000332682 RBM17Q96I25 401 aaKnown RBP14.79□□□□□ -0.04
TRIM49B-201ENST00000332682 NEUROD6Q96NK8 337 aa14.79□□□□□ -0.04
TRIM49B-201ENST00000332682 MINPP1Q9UNW1 487 aa14.79□□□□□ -0.04
TRIM49B-201ENST00000332682 LRRC37AA6NMS7 1700 aa14.79□□□□□ -0.04
TRIM49B-201ENST00000332682 KIF13BQ9NQT8 1826 aa14.78□□□□□ -0.04
TRIM49B-201ENST00000332682 ERC2O15083 957 aa14.78□□□□□ -0.04
TRIM49B-201ENST00000332682 TAF5LO75529 589 aa14.78□□□□□ -0.04
TRIM49B-201ENST00000332682 FGFR2P21802 821 aa14.78□□□□□ -0.04
TRIM49B-201ENST00000332682 CRAMP1Q96RY5 1269 aa14.78□□□□□ -0.04
TRIM49B-201ENST00000332682 MTFR1LQ9H019 292 aa14.78□□□□□ -0.04
TRIM49B-201ENST00000332682 AK9Q5TCS8 1911 aa14.78□□□□□ -0.04
TRIM49B-201ENST00000332682 DLEC1Q9Y238 1755 aa14.77□□□□□ -0.04
TRIM49B-201ENST00000332682 SDSP20132 328 aa14.77□□□□□ -0.04
TRIM49B-201ENST00000332682 ADORA1P30542 326 aa14.77□□□□□ -0.04
TRIM49B-201ENST00000332682 XAGE2Q96GT9 111 aa14.77□□□□□ -0.04
TRIM49B-201ENST00000332682 BACH2Q9BYV9 841 aa14.77□□□□□ -0.04
TRIM49B-201ENST00000332682 PSDA5PKW4 1024 aaPredicted RBP14.76□□□□□ -0.05
TRIM49B-201ENST00000332682 NPR1P16066 1061 aa14.76□□□□□ -0.05
TRIM49B-201ENST00000332682 SLC51AQ86UW1 340 aa14.76□□□□□ -0.05
TRIM49B-201ENST00000332682 LPIN2Q92539 896 aa14.76□□□□□ -0.05
TRIM49B-201ENST00000332682 CACNA1SQ13698 1873 aa14.76□□□□□ -0.05
TRIM49B-201ENST00000332682 LTBP1Q14766 1721 aa14.76□□□□□ -0.05
TRIM49B-201ENST00000332682 SNAP23O00161 211 aa14.76□□□□□ -0.05
TRIM49B-201ENST00000332682 ATP5JP18859 108 aa14.76□□□□□ -0.05
TRIM49B-201ENST00000332682 MASTLQ96GX5 879 aa14.76□□□□□ -0.05
TRIM49B-201ENST00000332682 BBOX1O75936 387 aa14.75□□□□□ -0.05
TRIM49B-201ENST00000332682 SLC5A1P13866 664 aa14.75□□□□□ -0.05
TRIM49B-201ENST00000332682 C2CD5Q86YS7 1000 aa14.75□□□□□ -0.05
TRIM49B-201ENST00000332682 ANKRD2Q9GZV1 360 aa14.75□□□□□ -0.05
TRIM49B-201ENST00000332682 ATF5Q9Y2D1 282 aaPredicted RBP14.75□□□□□ -0.05
TRIM49B-201ENST00000332682 UBE4AQ14139 1066 aa14.74□□□□□ -0.05
TRIM49B-201ENST00000332682 SGIP1Q9BQI5 828 aa14.74□□□□□ -0.05
TRIM49B-201ENST00000332682 BOLA2Q9H3K6 86 aa14.74□□□□□ -0.05
TRIM49B-201ENST00000332682 KIAA1551Q9HCM1 1747 aa14.74□□□□□ -0.05
TRIM49B-201ENST00000332682 TRIM6-TRIM34B2RNG4 842 aa14.73□□□□□ -0.05
TRIM49B-201ENST00000332682 H0YIN7 160 aa14.73□□□□□ -0.05
TRIM49B-201ENST00000332682 PPEF1O14829 653 aaPredicted RBP14.73□□□□□ -0.05
TRIM49B-201ENST00000332682 CDC45O75419 566 aa14.73□□□□□ -0.05
TRIM49B-201ENST00000332682 MAP4K4O95819 1239 aaPredicted RBP14.73□□□□□ -0.05
TRIM49B-201ENST00000332682 IFIT1P09914 478 aaKnown RBP14.73□□□□□ -0.05
TRIM49B-201ENST00000332682 POLD1P28340 1107 aa14.73□□□□□ -0.05
TRIM49B-201ENST00000332682 GORABQ5T7V8 394 aa14.73□□□□□ -0.05
TRIM49B-201ENST00000332682 STYK1Q6J9G0 422 aa14.73□□□□□ -0.05
TRIM49B-201ENST00000332682 TMC4Q7Z404 712 aa14.73□□□□□ -0.05
TRIM49B-201ENST00000332682 AKAP11Q9UKA4 1901 aa14.73□□□□□ -0.05
TRIM49B-201ENST00000332682 SLX4Q8IY92 1834 aa14.73□□□□□ -0.05
TRIM49B-201ENST00000332682 WTIPA6NIX2 430 aaPredicted RBP14.72□□□□□ -0.05
TRIM49B-201ENST00000332682 CHRNA5P30532 468 aa14.72□□□□□ -0.05
TRIM49B-201ENST00000332682 ALDH1B1P30837 517 aa14.72□□□□□ -0.05
TRIM49B-201ENST00000332682 CCDC158Q5M9N0 1113 aa14.72□□□□□ -0.05
TRIM49B-201ENST00000332682 CCDC102BQ68D86 513 aa14.72□□□□□ -0.05
TRIM49B-201ENST00000332682 TBC1D9Q6ZT07 1266 aa14.72□□□□□ -0.05
TRIM49B-201ENST00000332682 CNTROBQ8N137 903 aa14.72□□□□□ -0.05
TRIM49B-201ENST00000332682 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.72□□□□□ -0.05
TRIM49B-201ENST00000332682 RILPL2Q969X0 211 aa14.72□□□□□ -0.05
TRIM49B-201ENST00000332682 HAUS7Q99871 368 aa14.72□□□□□ -0.05
TRIM49B-201ENST00000332682 XDHP47989 1333 aa14.72□□□□□ -0.05
TRIM49B-201ENST00000332682 PHKA1P46020 1223 aa14.71□□□□□ -0.05
TRIM49B-201ENST00000332682 TTC39AQ5SRH9 613 aa14.71□□□□□ -0.05
TRIM49B-201ENST00000332682 ZNF622Q969S3 477 aaKnown RBP eCLIP14.71□□□□□ -0.05
TRIM49B-201ENST00000332682 ZNF512BQ96KM6 892 aaPredicted RBP14.71□□□□□ -0.05
TRIM49B-201ENST00000332682 TSHZ2Q9NRE2 1034 aa14.71□□□□□ -0.05
TRIM49B-201ENST00000332682 ATP6V0A2Q9Y487 856 aa14.71□□□□□ -0.05
TRIM49B-201ENST00000332682 DUOX1Q9NRD9 1551 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms