RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 SYTL4Q96C24 671 aaPredicted RBP17.7■□□□□ 0.42
CLCNKA-201ENST00000331433 ALDH8A1Q9H2A2 487 aaPredicted RBP17.7■□□□□ 0.42
CLCNKA-201ENST00000331433 ATP6V1DQ9Y5K8 247 aa17.7■□□□□ 0.42
CLCNKA-201ENST00000331433 LARP1BQ659C4 914 aaKnown RBP17.7■□□□□ 0.42
CLCNKA-201ENST00000331433 SYAP1Q96A49 352 aaPredicted RBP17.7■□□□□ 0.42
CLCNKA-201ENST00000331433 MAP3K15Q6ZN16 1313 aa17.69■□□□□ 0.42
CLCNKA-201ENST00000331433 DISP2A7MBM2 1401 aa17.69■□□□□ 0.42
CLCNKA-201ENST00000331433 ADORA1P30542 326 aa17.69■□□□□ 0.42
CLCNKA-201ENST00000331433 ZBTB38Q8NAP3 1195 aaPredicted RBP17.69■□□□□ 0.42
CLCNKA-201ENST00000331433 ESPNB1AK53 854 aa17.69■□□□□ 0.42
CLCNKA-201ENST00000331433 RNF214Q8ND24 703 aa17.69■□□□□ 0.42
CLCNKA-201ENST00000331433 BCL9O00512 1426 aa17.68■□□□□ 0.42
CLCNKA-201ENST00000331433 TAF7LQ5H9L4 462 aa17.68■□□□□ 0.42
CLCNKA-201ENST00000331433 GIGYF2Q6Y7W6 1299 aaKnown RBP17.68■□□□□ 0.42
CLCNKA-201ENST00000331433 STOX1Q6ZVD7 989 aa17.68■□□□□ 0.42
CLCNKA-201ENST00000331433 CDC37L1Q7L3B6 337 aa17.68■□□□□ 0.42
CLCNKA-201ENST00000331433 FERMT3Q86UX7 667 aa17.68■□□□□ 0.42
CLCNKA-201ENST00000331433 LRRC2Q9BYS8 371 aa17.68■□□□□ 0.42
CLCNKA-201ENST00000331433 HELLSQ9NRZ9 838 aa17.68■□□□□ 0.42
CLCNKA-201ENST00000331433 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.68■□□□□ 0.42
CLCNKA-201ENST00000331433 FKBP4Q02790 459 aaKnown RBP eCLIP17.67■□□□□ 0.42
CLCNKA-201ENST00000331433 ZMYM1Q5SVZ6 1142 aa17.67■□□□□ 0.42
CLCNKA-201ENST00000331433 Q6ZUG5 572 aa17.67■□□□□ 0.42
CLCNKA-201ENST00000331433 ZBTB1Q9Y2K1 713 aa17.67■□□□□ 0.42
CLCNKA-201ENST00000331433 A0A0G2JLW4 131 aa17.67■□□□□ 0.42
CLCNKA-201ENST00000331433 CYP19A1P11511 503 aaPredicted RBP17.67■□□□□ 0.42
CLCNKA-201ENST00000331433 IFIT5Q13325 482 aaKnown RBP17.67■□□□□ 0.42
CLCNKA-201ENST00000331433 XAGE2Q96GT9 111 aa17.67■□□□□ 0.42
CLCNKA-201ENST00000331433 UBE2HP62256 183 aa17.66■□□□□ 0.42
CLCNKA-201ENST00000331433 GORABQ5T7V8 394 aa17.66■□□□□ 0.42
CLCNKA-201ENST00000331433 PLA2G12BQ9BX93 195 aa17.66■□□□□ 0.42
CLCNKA-201ENST00000331433 MAST3O60307 1309 aa17.66■□□□□ 0.42
CLCNKA-201ENST00000331433 CSF1RP07333 972 aa17.66■□□□□ 0.42
CLCNKA-201ENST00000331433 NLRP10Q86W26 655 aa17.66■□□□□ 0.42
CLCNKA-201ENST00000331433 COL14A1Q05707 1796 aaKnown RBP17.65■□□□□ 0.42
CLCNKA-201ENST00000331433 EXOC5O00471 708 aa17.65■□□□□ 0.42
CLCNKA-201ENST00000331433 RNF113AO15541 343 aaKnown RBP17.65■□□□□ 0.42
CLCNKA-201ENST00000331433 HSPD1P10809 573 aaKnown RBP17.65■□□□□ 0.42
CLCNKA-201ENST00000331433 CLCN1P35523 988 aa17.65■□□□□ 0.42
CLCNKA-201ENST00000331433 TTC39AQ5SRH9 613 aa17.65■□□□□ 0.42
CLCNKA-201ENST00000331433 TSPY26PQ9H489 355 aa17.65■□□□□ 0.42
CLCNKA-201ENST00000331433 JAK2O60674 1132 aa17.65■□□□□ 0.42
CLCNKA-201ENST00000331433 HSP90B1P14625 803 aaKnown RBP17.65■□□□□ 0.42
CLCNKA-201ENST00000331433 CCDC158Q5M9N0 1113 aa17.65■□□□□ 0.42
CLCNKA-201ENST00000331433 FAM173BQ6P4H8 233 aa17.65■□□□□ 0.42
CLCNKA-201ENST00000331433 M0R2C6 588 aa17.64■□□□□ 0.42
CLCNKA-201ENST00000331433 SCARF1Q14162 830 aa17.64■□□□□ 0.42
CLCNKA-201ENST00000331433 BRF1Q92994 677 aa17.64■□□□□ 0.42
CLCNKA-201ENST00000331433 GTF3C6Q969F1 213 aa17.64■□□□□ 0.42
CLCNKA-201ENST00000331433 DSCC1Q9BVC3 393 aa17.64■□□□□ 0.42
CLCNKA-201ENST00000331433 GREM2Q9H772 168 aa17.64■□□□□ 0.42
CLCNKA-201ENST00000331433 AKAP2Q9Y2D5 859 aa17.64■□□□□ 0.42
CLCNKA-201ENST00000331433 PHF14O94880 888 aa17.64■□□□□ 0.41
CLCNKA-201ENST00000331433 PDCP20941 246 aa17.64■□□□□ 0.41
CLCNKA-201ENST00000331433 ITGA6P23229 1130 aa17.63■□□□□ 0.41
CLCNKA-201ENST00000331433 FGD1P98174 961 aa17.63■□□□□ 0.41
CLCNKA-201ENST00000331433 CCDC183Q5T5S1 534 aa17.63■□□□□ 0.41
CLCNKA-201ENST00000331433 PI16Q6UXB8 463 aa17.63■□□□□ 0.41
CLCNKA-201ENST00000331433 TTLL11Q8NHH1 800 aa17.63■□□□□ 0.41
CLCNKA-201ENST00000331433 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.63■□□□□ 0.41
CLCNKA-201ENST00000331433 OSBP2Q969R2 916 aa17.63■□□□□ 0.41
CLCNKA-201ENST00000331433 FBXO3Q9UK99 471 aa17.63■□□□□ 0.41
CLCNKA-201ENST00000331433 TBC1D2BQ9UPU7 963 aa17.63■□□□□ 0.41
CLCNKA-201ENST00000331433 LAMA4Q16363 1823 aa17.63■□□□□ 0.41
CLCNKA-201ENST00000331433 LRP6O75581 1613 aa17.63■□□□□ 0.41
CLCNKA-201ENST00000331433 ROBO1Q9Y6N7 1651 aa17.63■□□□□ 0.41
CLCNKA-201ENST00000331433 RIC1Q4ADV7 1423 aa17.63■□□□□ 0.41
CLCNKA-201ENST00000331433 PDLIM2Q96JY6 352 aa17.62■□□□□ 0.41
CLCNKA-201ENST00000331433 COL16A1Q07092 1604 aaPredicted RBP17.62■□□□□ 0.41
CLCNKA-201ENST00000331433 CDHR2Q9BYE9 1310 aa17.62■□□□□ 0.41
CLCNKA-201ENST00000331433 A0A0G2JS52 829 aa17.62■□□□□ 0.41
CLCNKA-201ENST00000331433 METTL24Q5JXM2 366 aa17.62■□□□□ 0.41
CLCNKA-201ENST00000331433 TTLL5Q6EMB2 1281 aa17.62■□□□□ 0.41
CLCNKA-201ENST00000331433 LDHAL6AQ6ZMR3 332 aa17.62■□□□□ 0.41
CLCNKA-201ENST00000331433 TRMT112Q9UI30 125 aaKnown RBP17.62■□□□□ 0.41
CLCNKA-201ENST00000331433 SPEF2Q9C093 1822 aa17.62■□□□□ 0.41
CLCNKA-201ENST00000331433 IRS4O14654 1257 aaPredicted RBP17.61■□□□□ 0.41
CLCNKA-201ENST00000331433 ZAP70P43403 619 aa17.61■□□□□ 0.41
CLCNKA-201ENST00000331433 CTSWP56202 376 aa17.61■□□□□ 0.41
CLCNKA-201ENST00000331433 CSPP1Q1MSJ5 1256 aa17.61■□□□□ 0.41
CLCNKA-201ENST00000331433 HSP90AB3PQ58FF7 597 aa17.61■□□□□ 0.41
CLCNKA-201ENST00000331433 DHX32Q7L7V1 743 aaKnown RBP17.61■□□□□ 0.41
CLCNKA-201ENST00000331433 RIPOR2Q9Y4F9 1068 aa17.61■□□□□ 0.41
CLCNKA-201ENST00000331433 SCRN1Q12765 414 aa17.61■□□□□ 0.41
CLCNKA-201ENST00000331433 ATP2B3Q16720 1220 aa17.61■□□□□ 0.41
CLCNKA-201ENST00000331433 WASHC4Q2M389 1173 aa17.61■□□□□ 0.41
CLCNKA-201ENST00000331433 DDX11Q96FC9 970 aa17.61■□□□□ 0.41
CLCNKA-201ENST00000331433 E7EWF7 191 aa17.6■□□□□ 0.41
CLCNKA-201ENST00000331433 TTC6Q86TZ1 520 aa17.6■□□□□ 0.41
CLCNKA-201ENST00000331433 TICAM2Q86XR7 235 aa17.6■□□□□ 0.41
CLCNKA-201ENST00000331433 DZIP3Q86Y13 1208 aaKnown RBP17.6■□□□□ 0.41
CLCNKA-201ENST00000331433 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.6■□□□□ 0.41
CLCNKA-201ENST00000331433 HMGB1P09429 215 aaKnown RBP17.6■□□□□ 0.41
CLCNKA-201ENST00000331433 KRT85P78386 507 aa17.6■□□□□ 0.41
CLCNKA-201ENST00000331433 APOBRQ0VD83 1088 aa17.6■□□□□ 0.41
CLCNKA-201ENST00000331433 CHST3Q7LGC8 479 aa17.6■□□□□ 0.41
CLCNKA-201ENST00000331433 NUP98P52948 1817 aa17.6■□□□□ 0.41
CLCNKA-201ENST00000331433 UBN2Q6ZU65 1347 aa17.59■□□□□ 0.41
CLCNKA-201ENST00000331433 ADAMTS2O95450 1211 aa17.59■□□□□ 0.41
CLCNKA-201ENST00000331433 CNNM1Q9NRU3 951 aa17.59■□□□□ 0.41
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