RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 CHST3Q7LGC8 479 aa19.05■□□□□ 0.64
PDGFB-201ENST00000331163 ZMYND15Q9H091 742 aa19.05■□□□□ 0.64
PDGFB-201ENST00000331163 ZAP70P43403 619 aa19.04■□□□□ 0.64
PDGFB-201ENST00000331163 NFIXQ14938 502 aa19.04■□□□□ 0.64
PDGFB-201ENST00000331163 JAKMIP1Q96N16 626 aaKnown RBP19.04■□□□□ 0.64
PDGFB-201ENST00000331163 TNS2Q63HR2 1409 aa19.04■□□□□ 0.64
PDGFB-201ENST00000331163 ATP10DQ9P241 1426 aa19.04■□□□□ 0.64
PDGFB-201ENST00000331163 ST18O60284 1047 aa19.04■□□□□ 0.64
PDGFB-201ENST00000331163 MMP10P09238 476 aa19.04■□□□□ 0.64
PDGFB-201ENST00000331163 SLC5A1P13866 664 aa19.04■□□□□ 0.64
PDGFB-201ENST00000331163 CHMLP26374 656 aa19.04■□□□□ 0.64
PDGFB-201ENST00000331163 ST5P78524 1137 aa19.04■□□□□ 0.64
PDGFB-201ENST00000331163 C3orf67Q6ZVT6 689 aa19.04■□□□□ 0.64
PDGFB-201ENST00000331163 SERPINB2P05120 415 aa19.04■□□□□ 0.64
PDGFB-201ENST00000331163 PHKA1P46020 1223 aa19.04■□□□□ 0.64
PDGFB-201ENST00000331163 PARP10Q53GL7 1025 aa19.04■□□□□ 0.64
PDGFB-201ENST00000331163 ALS2Q96Q42 1657 aa19.03■□□□□ 0.64
PDGFB-201ENST00000331163 POLA2Q14181 598 aa19.03■□□□□ 0.64
PDGFB-201ENST00000331163 SLC51AQ86UW1 340 aa19.03■□□□□ 0.64
PDGFB-201ENST00000331163 SLC9C2Q5TAH2 1124 aa19.03■□□□□ 0.64
PDGFB-201ENST00000331163 PARP3Q9Y6F1 533 aa19.03■□□□□ 0.64
PDGFB-201ENST00000331163 XIRP1Q702N8 1843 aaKnown RBP19.03■□□□□ 0.64
PDGFB-201ENST00000331163 TRAK2O60296 914 aa19.02■□□□□ 0.64
PDGFB-201ENST00000331163 PAG1Q9NWQ8 432 aa19.02■□□□□ 0.64
PDGFB-201ENST00000331163 CAVIN4Q5BKX8 364 aa19.02■□□□□ 0.64
PDGFB-201ENST00000331163 ESYT1Q9BSJ8 1104 aa19.02■□□□□ 0.64
PDGFB-201ENST00000331163 STK32BQ9NY57 414 aa19.02■□□□□ 0.63
PDGFB-201ENST00000331163 CASTP20810 708 aaKnown RBP19.01■□□□□ 0.63
PDGFB-201ENST00000331163 MCM4P33991 863 aa19.01■□□□□ 0.63
PDGFB-201ENST00000331163 RPS8P62241 208 aaKnown RBP19.01■□□□□ 0.63
PDGFB-201ENST00000331163 EVI5LQ96CN4 794 aa19.01■□□□□ 0.63
PDGFB-201ENST00000331163 LRP6O75581 1613 aa19.01■□□□□ 0.63
PDGFB-201ENST00000331163 RBM5P52756 815 aaKnown RBP eCLIP19.01■□□□□ 0.63
PDGFB-201ENST00000331163 SAMD1Q6SPF0 538 aaPredicted RBP19.01■□□□□ 0.63
PDGFB-201ENST00000331163 COPRSQ9NQ92 184 aa19.01■□□□□ 0.63
PDGFB-201ENST00000331163 MINDY4BA8MYZ0 360 aa19.01■□□□□ 0.63
PDGFB-201ENST00000331163 CHRNDQ07001 517 aa19.01■□□□□ 0.63
PDGFB-201ENST00000331163 OLFM4Q6UX06 510 aa19.01■□□□□ 0.63
PDGFB-201ENST00000331163 TBC1D32Q96NH3 1257 aa19.01■□□□□ 0.63
PDGFB-201ENST00000331163 LRP10Q7Z4F1 713 aa19■□□□□ 0.63
PDGFB-201ENST00000331163 NARFQ9UHQ1 456 aa19■□□□□ 0.63
PDGFB-201ENST00000331163 BAG6P46379 1132 aa19■□□□□ 0.63
PDGFB-201ENST00000331163 NYXQ9GZU5 481 aa18.99■□□□□ 0.63
PDGFB-201ENST00000331163 A0A0D9SFI3 127 aa18.99■□□□□ 0.63
PDGFB-201ENST00000331163 AIDAQ96BJ3 306 aa18.99■□□□□ 0.63
PDGFB-201ENST00000331163 PHRF1Q9P1Y6 1649 aaKnown RBP18.99■□□□□ 0.63
PDGFB-201ENST00000331163 ERVV-1B6SEH8 477 aa18.98■□□□□ 0.63
PDGFB-201ENST00000331163 SCARF1Q14162 830 aa18.98■□□□□ 0.63
PDGFB-201ENST00000331163 PDGFDQ9GZP0 370 aaPredicted RBP18.98■□□□□ 0.63
PDGFB-201ENST00000331163 PALD1Q9ULE6 856 aa18.98■□□□□ 0.63
PDGFB-201ENST00000331163 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.97■□□□□ 0.63
PDGFB-201ENST00000331163 UFL1O94874 794 aa18.97■□□□□ 0.63
PDGFB-201ENST00000331163 GNL3LQ9NVN8 582 aaKnown RBP18.97■□□□□ 0.63
PDGFB-201ENST00000331163 IL25Q9H293 177 aa18.97■□□□□ 0.63
PDGFB-201ENST00000331163 PTH1RQ03431 593 aa18.96■□□□□ 0.63
PDGFB-201ENST00000331163 CCDC82Q8N4S0 544 aa18.96■□□□□ 0.63
PDGFB-201ENST00000331163 MAGEB6Q8N7X4 407 aa18.96■□□□□ 0.63
PDGFB-201ENST00000331163 CCDC102BQ68D86 513 aa18.95■□□□□ 0.62
PDGFB-201ENST00000331163 ATG9AQ7Z3C6 839 aa18.95■□□□□ 0.62
PDGFB-201ENST00000331163 ZNF34Q8IZ26 560 aa18.95■□□□□ 0.62
PDGFB-201ENST00000331163 PIBF1Q8WXW3 757 aa18.95■□□□□ 0.62
PDGFB-201ENST00000331163 PDE8BO95263 885 aa18.95■□□□□ 0.62
PDGFB-201ENST00000331163 TDO2P48775 406 aa18.95■□□□□ 0.62
PDGFB-201ENST00000331163 DOK7Q18PE1 504 aa18.95■□□□□ 0.62
PDGFB-201ENST00000331163 PI4K2BQ8TCG2 481 aa18.95■□□□□ 0.62
PDGFB-201ENST00000331163 RBM8AQ9Y5S9 174 aaKnown RBP18.95■□□□□ 0.62
PDGFB-201ENST00000331163 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.94■□□□□ 0.62
PDGFB-201ENST00000331163 CHRNA5P30532 468 aa18.94■□□□□ 0.62
PDGFB-201ENST00000331163 PUM3Q15397 648 aaKnown RBP18.94■□□□□ 0.62
PDGFB-201ENST00000331163 RNF20Q5VTR2 975 aa18.94■□□□□ 0.62
PDGFB-201ENST00000331163 TTLL5Q6EMB2 1281 aa18.94■□□□□ 0.62
PDGFB-201ENST00000331163 RGPD1P0DJD0 1748 aa18.93■□□□□ 0.62
PDGFB-201ENST00000331163 ZNF589Q86UQ0 364 aaPredicted RBP18.93■□□□□ 0.62
PDGFB-201ENST00000331163 COL23A1Q86Y22 540 aaPredicted RBP18.93■□□□□ 0.62
PDGFB-201ENST00000331163 DZIP1Q86YF9 867 aaKnown RBP18.93■□□□□ 0.62
PDGFB-201ENST00000331163 SLIT2O94813 1529 aa18.93■□□□□ 0.62
PDGFB-201ENST00000331163 CYP7A1P22680 504 aa18.93■□□□□ 0.62
PDGFB-201ENST00000331163 ZNF827Q17R98 1081 aa18.93■□□□□ 0.62
PDGFB-201ENST00000331163 RALYLQ86SE5 291 aaKnown RBP18.93■□□□□ 0.62
PDGFB-201ENST00000331163 USP26Q9BXU7 913 aa18.93■□□□□ 0.62
PDGFB-201ENST00000331163 CCDC144CPQ8IYA2 1237 aa18.92■□□□□ 0.62
PDGFB-201ENST00000331163 VPS37CA5D8V6 355 aaPredicted RBP18.92■□□□□ 0.62
PDGFB-201ENST00000331163 CD2BP2O95400 341 aaKnown RBP18.92■□□□□ 0.62
PDGFB-201ENST00000331163 RFX5P48382 616 aaPredicted RBP18.92■□□□□ 0.62
PDGFB-201ENST00000331163 NECAB1Q8N987 351 aa18.92■□□□□ 0.62
PDGFB-201ENST00000331163 CHMP5Q9NZZ3 219 aa18.92■□□□□ 0.62
PDGFB-201ENST00000331163 NTSR2O95665 410 aa18.91■□□□□ 0.62
PDGFB-201ENST00000331163 MAP3K12Q12852 859 aa18.91■□□□□ 0.62
PDGFB-201ENST00000331163 R3HDM1Q15032 1099 aaKnown RBP18.91■□□□□ 0.62
PDGFB-201ENST00000331163 VPS53Q5VIR6 699 aa18.91■□□□□ 0.62
PDGFB-201ENST00000331163 NFXL1Q6ZNB6 911 aa18.91■□□□□ 0.62
PDGFB-201ENST00000331163 DDX11Q96FC9 970 aa18.91■□□□□ 0.62
PDGFB-201ENST00000331163 TTC41PQ6P2S7 1318 aa18.91■□□□□ 0.62
PDGFB-201ENST00000331163 KLRK1P26718 216 aa18.91■□□□□ 0.62
PDGFB-201ENST00000331163 MTX1Q13505 466 aa18.91■□□□□ 0.62
PDGFB-201ENST00000331163 GRPEL1Q9HAV7 217 aa18.91■□□□□ 0.62
PDGFB-201ENST00000331163 ESPNB1AK53 854 aa18.91■□□□□ 0.62
PDGFB-201ENST00000331163 TRDNQ13061 729 aa18.91■□□□□ 0.62
PDGFB-201ENST00000331163 FBXO41Q8TF61 875 aa18.91■□□□□ 0.62
PDGFB-201ENST00000331163 CASP7P55210 303 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms