RNA–Protein interactions for RNA: ENST00000330891.9

BEST3-202, Transcript of bestrophin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BEST3, Length 3,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-202ENST00000330891 RNF20Q5VTR2 975 aa8.36□□□□□ -1.07
BEST3-202ENST00000330891 STOX1Q6ZVD7 989 aa8.36□□□□□ -1.07
BEST3-202ENST00000330891 IFNL2Q8IZJ0 200 aa8.36□□□□□ -1.07
BEST3-202ENST00000330891 INCENPQ9NQS7 918 aa8.36□□□□□ -1.07
BEST3-202ENST00000330891 NBPF26B4DH59 902 aa8.36□□□□□ -1.07
BEST3-202ENST00000330891 RPS6KB1P23443 525 aa8.36□□□□□ -1.07
BEST3-202ENST00000330891 GNL2Q13823 731 aaKnown RBP8.36□□□□□ -1.07
BEST3-202ENST00000330891 NBPF14Q5TI25 921 aa8.36□□□□□ -1.07
BEST3-202ENST00000330891 NBPF10Q6P3W6 841 aaKnown RBP8.36□□□□□ -1.07
BEST3-202ENST00000330891 NBPF15Q8N660 670 aa8.36□□□□□ -1.07
BEST3-202ENST00000330891 TRIM5Q9C035 493 aa8.36□□□□□ -1.07
BEST3-202ENST00000330891 COL15A1P39059 1388 aa8.35□□□□□ -1.07
BEST3-202ENST00000330891 BIN1O00499 593 aa8.35□□□□□ -1.07
BEST3-202ENST00000330891 NPHP1O15259 732 aa8.35□□□□□ -1.07
BEST3-202ENST00000330891 APPP05067 770 aa8.35□□□□□ -1.07
BEST3-202ENST00000330891 ARID5BQ14865 1188 aa8.35□□□□□ -1.07
BEST3-202ENST00000330891 SF3A1Q15459 793 aaKnown RBP8.35□□□□□ -1.07
BEST3-202ENST00000330891 NUP62CLQ9H1M0 184 aa8.35□□□□□ -1.07
BEST3-202ENST00000330891 PSMA5P28066 241 aa8.35□□□□□ -1.07
BEST3-202ENST00000330891 TOMM22Q9NS69 142 aa8.35□□□□□ -1.07
BEST3-202ENST00000330891 BECN2A8MW95 431 aa8.34□□□□□ -1.07
BEST3-202ENST00000330891 EVA1CP58658 441 aa8.34□□□□□ -1.07
BEST3-202ENST00000330891 CSPP1Q1MSJ5 1256 aa8.34□□□□□ -1.07
BEST3-202ENST00000330891 HSP90AA4PQ58FG1 418 aa8.34□□□□□ -1.07
BEST3-202ENST00000330891 HOMEZQ8IX15 550 aa8.34□□□□□ -1.07
BEST3-202ENST00000330891 IGSF3O75054 1194 aa8.34□□□□□ -1.07
BEST3-202ENST00000330891 IFIT1P09914 478 aaKnown RBP8.34□□□□□ -1.07
BEST3-202ENST00000330891 SCRN1Q12765 414 aa8.34□□□□□ -1.07
BEST3-202ENST00000330891 NOLC1Q14978 699 aaKnown RBP eCLIP8.34□□□□□ -1.07
BEST3-202ENST00000330891 IQSEC3Q9UPP2 1182 aaPredicted RBP8.34□□□□□ -1.07
BEST3-202ENST00000330891 TYRO3Q06418 890 aa8.34□□□□□ -1.07
BEST3-202ENST00000330891 CCDC186Q7Z3E2 898 aa8.34□□□□□ -1.07
BEST3-202ENST00000330891 FILIP1Q7Z7B0 1213 aa8.34□□□□□ -1.07
BEST3-202ENST00000330891 PGBD1Q96JS3 809 aa8.34□□□□□ -1.07
BEST3-202ENST00000330891 C16orf45Q96MC5 204 aaPredicted RBP8.34□□□□□ -1.07
BEST3-202ENST00000330891 AOX1Q06278 1338 aa8.34□□□□□ -1.08
BEST3-202ENST00000330891 GOLGA6L19H0YKK7 550 aa8.33□□□□□ -1.08
BEST3-202ENST00000330891 ME1P48163 572 aa8.33□□□□□ -1.08
BEST3-202ENST00000330891 SCARF1Q14162 830 aa8.33□□□□□ -1.08
BEST3-202ENST00000330891 MAP3K11Q16584 847 aa8.33□□□□□ -1.08
BEST3-202ENST00000330891 LEO1Q8WVC0 666 aaPredicted RBP8.33□□□□□ -1.08
BEST3-202ENST00000330891 CCDC192P0DO97 292 aa8.33□□□□□ -1.08
BEST3-202ENST00000330891 ATP2B1P20020 1258 aa8.33□□□□□ -1.08
BEST3-202ENST00000330891 MTX1Q13505 466 aa8.33□□□□□ -1.08
BEST3-202ENST00000330891 NAA30Q147X3 362 aaPredicted RBP8.33□□□□□ -1.08
BEST3-202ENST00000330891 ZSCAN31Q96LW9 406 aaPredicted RBP8.33□□□□□ -1.08
BEST3-202ENST00000330891 HDAC5Q9UQL6 1122 aa8.33□□□□□ -1.08
BEST3-202ENST00000330891 A0A1B0GUL7 405 aa8.33□□□□□ -1.08
BEST3-202ENST00000330891 SPDYE4A6NLX3 237 aa8.33□□□□□ -1.08
BEST3-202ENST00000330891 GOLGA6L6A8MZA4 724 aa8.33□□□□□ -1.08
BEST3-202ENST00000330891 HOXB7P09629 217 aa8.33□□□□□ -1.08
BEST3-202ENST00000330891 MCMDC2Q4G0Z9 681 aa8.33□□□□□ -1.08
BEST3-202ENST00000330891 SMIM5Q71RC9 77 aa8.33□□□□□ -1.08
BEST3-202ENST00000330891 MYL10Q9BUA6 226 aa8.33□□□□□ -1.08
BEST3-202ENST00000330891 CHMP4AQ9BY43 222 aa8.33□□□□□ -1.08
BEST3-202ENST00000330891 C19orf44Q9H6X5 657 aa8.33□□□□□ -1.08
BEST3-202ENST00000330891 SH2B1Q9NRF2 756 aaPredicted RBP8.33□□□□□ -1.08
BEST3-202ENST00000330891 PAG1Q9NWQ8 432 aa8.33□□□□□ -1.08
BEST3-202ENST00000330891 BABAM1Q9NWV8 329 aa8.33□□□□□ -1.08
BEST3-202ENST00000330891 TRMT1Q9NXH9 659 aaKnown RBP8.33□□□□□ -1.08
BEST3-202ENST00000330891 RGPD2P0DJD1 1756 aa8.32□□□□□ -1.08
BEST3-202ENST00000330891 UBE2Q2LH0YL09 131 aa8.32□□□□□ -1.08
BEST3-202ENST00000330891 AIFM3Q96NN9 605 aa8.32□□□□□ -1.08
BEST3-202ENST00000330891 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.32□□□□□ -1.08
BEST3-202ENST00000330891 ASAP1Q9ULH1 1129 aa8.32□□□□□ -1.08
BEST3-202ENST00000330891 TBC1D2BQ9UPU7 963 aa8.32□□□□□ -1.08
BEST3-202ENST00000330891 V9GYY5 206 aaPredicted RBP8.32□□□□□ -1.08
BEST3-202ENST00000330891 A0A1B0GVL5 298 aa8.32□□□□□ -1.08
BEST3-202ENST00000330891 M0R2C6 588 aa8.32□□□□□ -1.08
BEST3-202ENST00000330891 IDH1O75874 414 aaKnown RBP8.32□□□□□ -1.08
BEST3-202ENST00000330891 SASS6Q6UVJ0 657 aa8.32□□□□□ -1.08
BEST3-202ENST00000330891 CBX8Q9HC52 389 aa8.32□□□□□ -1.08
BEST3-202ENST00000330891 ABCC6O95255 1503 aa8.32□□□□□ -1.08
BEST3-202ENST00000330891 PTPDC1A2A3K4 754 aa8.32□□□□□ -1.08
BEST3-202ENST00000330891 TPM2P07951 284 aa8.32□□□□□ -1.08
BEST3-202ENST00000330891 RFX5P48382 616 aaPredicted RBP8.32□□□□□ -1.08
BEST3-202ENST00000330891 ZMYND15Q9H091 742 aa8.32□□□□□ -1.08
BEST3-202ENST00000330891 KCNF1Q9H3M0 494 aa8.32□□□□□ -1.08
BEST3-202ENST00000330891 MRVI1Q9Y6F6 885 aa8.32□□□□□ -1.08
BEST3-202ENST00000330891 MARCKSP29966 332 aaPredicted RBP8.31□□□□□ -1.08
BEST3-202ENST00000330891 ZNF165P49910 485 aa8.31□□□□□ -1.08
BEST3-202ENST00000330891 SLC4A8Q2Y0W8 1093 aa8.31□□□□□ -1.08
BEST3-202ENST00000330891 CREBRFQ8IUR6 639 aa8.31□□□□□ -1.08
BEST3-202ENST00000330891 NKX2-3Q8TAU0 364 aa8.31□□□□□ -1.08
BEST3-202ENST00000330891 OSBP2Q969R2 916 aa8.31□□□□□ -1.08
BEST3-202ENST00000330891 USP28Q96RU2 1077 aa8.31□□□□□ -1.08
BEST3-202ENST00000330891 RGPD1P0DJD0 1748 aa8.31□□□□□ -1.08
BEST3-202ENST00000330891 ZNF609O15014 1411 aa8.31□□□□□ -1.08
BEST3-202ENST00000330891 ZAP70P43403 619 aa8.31□□□□□ -1.08
BEST3-202ENST00000330891 KCNQ4P56696 695 aa8.31□□□□□ -1.08
BEST3-202ENST00000330891 CCDC57Q2TAC2 916 aa8.31□□□□□ -1.08
BEST3-202ENST00000330891 RRP12Q5JTH9 1297 aaKnown RBP8.31□□□□□ -1.08
BEST3-202ENST00000330891 TTC39AQ5SRH9 613 aa8.31□□□□□ -1.08
BEST3-202ENST00000330891 CCAR1Q8IX12 1150 aaKnown RBP8.31□□□□□ -1.08
BEST3-202ENST00000330891 DNAJC10Q8IXB1 793 aa8.31□□□□□ -1.08
BEST3-202ENST00000330891 CMTR1Q8N1G2 835 aaKnown RBP8.31□□□□□ -1.08
BEST3-202ENST00000330891 CWC25Q9NXE8 425 aaPredicted RBP8.31□□□□□ -1.08
BEST3-202ENST00000330891 CEP126Q9P2H0 1117 aa8.31□□□□□ -1.08
BEST3-202ENST00000330891 KIF1AQ12756 1690 aa8.31□□□□□ -1.08
BEST3-202ENST00000330891 ZNF500O60304 480 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms