RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 LEO1Q8WVC0 666 aaPredicted RBP18.18■□□□□ 0.5
BRCC3-201ENST00000330045 DACT1Q9NYF0 836 aa18.18■□□□□ 0.5
BRCC3-201ENST00000330045 ARFGEF2Q9Y6D5 1785 aa18.18■□□□□ 0.5
BRCC3-201ENST00000330045 A0A087WZG4 1122 aa18.17■□□□□ 0.5
BRCC3-201ENST00000330045 CABP4P57796 275 aa18.17■□□□□ 0.5
BRCC3-201ENST00000330045 TYRO3Q06418 890 aa18.17■□□□□ 0.5
BRCC3-201ENST00000330045 MCMDC2Q4G0Z9 681 aa18.17■□□□□ 0.5
BRCC3-201ENST00000330045 DBNDD2Q9BQY9 259 aa18.17■□□□□ 0.5
BRCC3-201ENST00000330045 SPTLC3Q9NUV7 552 aa18.17■□□□□ 0.5
BRCC3-201ENST00000330045 ZNF609O15014 1411 aa18.17■□□□□ 0.5
BRCC3-201ENST00000330045 ATP5J2-PTCD1G3V325 749 aa18.17■□□□□ 0.5
BRCC3-201ENST00000330045 PTCD1O75127 700 aaKnown RBP18.17■□□□□ 0.5
BRCC3-201ENST00000330045 TPM3P06753 285 aa18.17■□□□□ 0.5
BRCC3-201ENST00000330045 CCDC129Q6ZRS4 1044 aa18.17■□□□□ 0.5
BRCC3-201ENST00000330045 Q6ZUG5 572 aa18.17■□□□□ 0.5
BRCC3-201ENST00000330045 FMNL2Q96PY5 1086 aa18.17■□□□□ 0.5
BRCC3-201ENST00000330045 HAUS7Q99871 368 aa18.17■□□□□ 0.5
BRCC3-201ENST00000330045 TNMDQ9H2S6 317 aa18.17■□□□□ 0.5
BRCC3-201ENST00000330045 MRVI1Q9Y6F6 885 aa18.17■□□□□ 0.5
BRCC3-201ENST00000330045 JAK2O60674 1132 aa18.16■□□□□ 0.5
BRCC3-201ENST00000330045 C17orf53Q8N3J3 647 aaPredicted RBP18.16■□□□□ 0.5
BRCC3-201ENST00000330045 MYRIPQ8NFW9 859 aa18.16■□□□□ 0.5
BRCC3-201ENST00000330045 PRIMPOLQ96LW4 560 aa18.16■□□□□ 0.5
BRCC3-201ENST00000330045 SEC62Q99442 399 aaKnown RBP18.16■□□□□ 0.5
BRCC3-201ENST00000330045 DDX19AQ9NUU7 478 aaKnown RBP18.16■□□□□ 0.5
BRCC3-201ENST00000330045 CHGBP05060 677 aa18.16■□□□□ 0.5
BRCC3-201ENST00000330045 CYP21A2P08686 494 aa18.16■□□□□ 0.5
BRCC3-201ENST00000330045 GOLGA6L6A8MZA4 724 aa18.15■□□□□ 0.5
BRCC3-201ENST00000330045 HSP90B1P14625 803 aaKnown RBP18.15■□□□□ 0.5
BRCC3-201ENST00000330045 CKAP2LQ8IYA6 745 aa18.15■□□□□ 0.5
BRCC3-201ENST00000330045 GLI3P10071 1580 aa18.15■□□□□ 0.5
BRCC3-201ENST00000330045 PCDH11XQ9BZA7 1347 aa18.15■□□□□ 0.5
BRCC3-201ENST00000330045 PCDH11YQ9BZA8 1340 aa18.15■□□□□ 0.5
BRCC3-201ENST00000330045 DDX46Q7L014 1031 aaKnown RBP18.15■□□□□ 0.5
BRCC3-201ENST00000330045 SPC24Q8NBT2 197 aa18.15■□□□□ 0.5
BRCC3-201ENST00000330045 SHANK3Q9BYB0 1731 aa18.15■□□□□ 0.5
BRCC3-201ENST00000330045 COL16A1Q07092 1604 aaPredicted RBP18.14■□□□□ 0.5
BRCC3-201ENST00000330045 AHDC1Q5TGY3 1603 aaPredicted RBP18.14■□□□□ 0.5
BRCC3-201ENST00000330045 HMGN5P82970 282 aaKnown RBP18.14■□□□□ 0.5
BRCC3-201ENST00000330045 MTERF4Q7Z6M4 381 aaKnown RBP18.14■□□□□ 0.5
BRCC3-201ENST00000330045 BRF1Q92994 677 aa18.14■□□□□ 0.5
BRCC3-201ENST00000330045 PARP4Q9UKK3 1724 aaKnown RBP18.14■□□□□ 0.5
BRCC3-201ENST00000330045 LAMB4A4D0S4 1761 aa18.14■□□□□ 0.49
BRCC3-201ENST00000330045 CASP7P55210 303 aa18.14■□□□□ 0.49
BRCC3-201ENST00000330045 VSIG10Q8N0Z9 540 aa18.14■□□□□ 0.49
BRCC3-201ENST00000330045 PLBD2Q8NHP8 589 aa18.14■□□□□ 0.49
BRCC3-201ENST00000330045 KCNF1Q9H3M0 494 aa18.14■□□□□ 0.49
BRCC3-201ENST00000330045 NUTM2BA6NNL0 878 aaPredicted RBP18.13■□□□□ 0.49
BRCC3-201ENST00000330045 NUTM2EB1AL46 878 aaPredicted RBP18.13■□□□□ 0.49
BRCC3-201ENST00000330045 H3BQV1 296 aa18.13■□□□□ 0.49
BRCC3-201ENST00000330045 RESTQ13127 1097 aa18.13■□□□□ 0.49
BRCC3-201ENST00000330045 IFFO2Q5TF58 517 aa18.13■□□□□ 0.49
BRCC3-201ENST00000330045 LMBR1LQ6UX01 489 aa18.13■□□□□ 0.49
BRCC3-201ENST00000330045 RBM43Q6ZSC3 357 aaKnown RBP18.13■□□□□ 0.49
BRCC3-201ENST00000330045 LUZP1Q86V48 1076 aa18.13■□□□□ 0.49
BRCC3-201ENST00000330045 NUTM2AQ8IVF1 878 aaPredicted RBP18.13■□□□□ 0.49
BRCC3-201ENST00000330045 KBTBD3Q8NAB2 608 aa18.13■□□□□ 0.49
BRCC3-201ENST00000330045 KIAA1524Q8TCG1 905 aa18.13■□□□□ 0.49
BRCC3-201ENST00000330045 CLSTN2Q9H4D0 955 aa18.13■□□□□ 0.49
BRCC3-201ENST00000330045 ANO6Q4KMQ2 910 aa18.13■□□□□ 0.49
BRCC3-201ENST00000330045 PGBD1Q96JS3 809 aa18.13■□□□□ 0.49
BRCC3-201ENST00000330045 ZSCAN16Q9H4T2 348 aaPredicted RBP18.13■□□□□ 0.49
BRCC3-201ENST00000330045 BICD2Q8TD16 824 aa18.12■□□□□ 0.49
BRCC3-201ENST00000330045 SH3TC1Q8TE82 1336 aa18.12■□□□□ 0.49
BRCC3-201ENST00000330045 NR1I2O75469 434 aa18.12■□□□□ 0.49
BRCC3-201ENST00000330045 FGD1P98174 961 aa18.12■□□□□ 0.49
BRCC3-201ENST00000330045 DDX11Q96FC9 970 aa18.12■□□□□ 0.49
BRCC3-201ENST00000330045 CBX8Q9HC52 389 aa18.12■□□□□ 0.49
BRCC3-201ENST00000330045 HMGB1P09429 215 aaKnown RBP18.11■□□□□ 0.49
BRCC3-201ENST00000330045 SCRN1Q12765 414 aa18.11■□□□□ 0.49
BRCC3-201ENST00000330045 LRRC2Q9BYS8 371 aa18.11■□□□□ 0.49
BRCC3-201ENST00000330045 PYCARDQ9ULZ3 195 aa18.11■□□□□ 0.49
BRCC3-201ENST00000330045 CCDC9Q9Y3X0 531 aaKnown RBP18.11■□□□□ 0.49
BRCC3-201ENST00000330045 CFAP45Q9UL16 551 aa18.11■□□□□ 0.49
BRCC3-201ENST00000330045 FOXO4P98177 505 aa18.1■□□□□ 0.49
BRCC3-201ENST00000330045 STOX1Q6ZVD7 989 aa18.1■□□□□ 0.49
BRCC3-201ENST00000330045 SMARCC2Q8TAQ2 1214 aa18.1■□□□□ 0.49
BRCC3-201ENST00000330045 NEUROD6Q96NK8 337 aa18.1■□□□□ 0.49
BRCC3-201ENST00000330045 LLPHQ9BRT6 129 aaKnown RBP18.1■□□□□ 0.49
BRCC3-201ENST00000330045 PFKFB2O60825 505 aa18.1■□□□□ 0.49
BRCC3-201ENST00000330045 DHX32Q7L7V1 743 aaKnown RBP18.1■□□□□ 0.49
BRCC3-201ENST00000330045 PALLDQ8WX93 1383 aa18.09■□□□□ 0.49
BRCC3-201ENST00000330045 H7C1W4 665 aa18.09■□□□□ 0.49
BRCC3-201ENST00000330045 GTF2F1P35269 517 aaKnown RBP eCLIP18.09■□□□□ 0.49
BRCC3-201ENST00000330045 HELLSQ9NRZ9 838 aa18.09■□□□□ 0.49
BRCC3-201ENST00000330045 PAG1Q9NWQ8 432 aa18.09■□□□□ 0.49
BRCC3-201ENST00000330045 PHLPP1O60346 1717 aa18.09■□□□□ 0.49
BRCC3-201ENST00000330045 GOLIM4O00461 696 aa18.09■□□□□ 0.49
BRCC3-201ENST00000330045 ATG9AQ7Z3C6 839 aa18.09■□□□□ 0.49
BRCC3-201ENST00000330045 TOGARAM1Q9Y4F4 1720 aa18.08■□□□□ 0.49
BRCC3-201ENST00000330045 NKX1-1Q15270 411 aaPredicted RBP18.08■□□□□ 0.49
BRCC3-201ENST00000330045 DSCC1Q9BVC3 393 aa18.08■□□□□ 0.49
BRCC3-201ENST00000330045 TIMM10P62072 90 aa18.08■□□□□ 0.48
BRCC3-201ENST00000330045 NSUN7Q8NE18 718 aaKnown RBP18.08■□□□□ 0.48
BRCC3-201ENST00000330045 GPR108Q9NPR9 543 aa18.08■□□□□ 0.48
BRCC3-201ENST00000330045 LAMA4Q16363 1823 aa18.07■□□□□ 0.48
BRCC3-201ENST00000330045 COL22A1Q8NFW1 1626 aaPredicted RBP18.07■□□□□ 0.48
BRCC3-201ENST00000330045 PTGS1P23219 599 aa18.07■□□□□ 0.48
BRCC3-201ENST00000330045 ZNF165P49910 485 aa18.07■□□□□ 0.48
BRCC3-201ENST00000330045 SLFNL1Q499Z3 407 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms