RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 TTC14Q96N46 770 aa12.66□□□□□ -0.38
CUL4A-201ENST00000326335 C8orf37Q96NL8 207 aa12.66□□□□□ -0.38
CUL4A-201ENST00000326335 COPRSQ9NQ92 184 aa12.66□□□□□ -0.38
CUL4A-201ENST00000326335 MTMR7Q9Y216 660 aa12.66□□□□□ -0.38
CUL4A-201ENST00000326335 F13A1P00488 732 aa12.65□□□□□ -0.38
CUL4A-201ENST00000326335 MAP4K1Q92918 833 aa12.65□□□□□ -0.38
CUL4A-201ENST00000326335 MSNP26038 577 aaKnown RBP12.65□□□□□ -0.38
CUL4A-201ENST00000326335 ST3GAL1Q11201 340 aa12.65□□□□□ -0.38
CUL4A-201ENST00000326335 MCMDC2Q4G0Z9 681 aa12.65□□□□□ -0.38
CUL4A-201ENST00000326335 ABCF2Q9UG63 623 aa12.65□□□□□ -0.38
CUL4A-201ENST00000326335 CUL4AQ13619 759 aa12.65□□□□□ -0.38
CUL4A-201ENST00000326335 FAM98CQ17RN3 349 aaKnown RBP12.65□□□□□ -0.38
CUL4A-201ENST00000326335 C17orf53Q8N3J3 647 aaPredicted RBP12.65□□□□□ -0.38
CUL4A-201ENST00000326335 SLC4A9Q96Q91 983 aa12.65□□□□□ -0.38
CUL4A-201ENST00000326335 CARD10Q9BWT7 1032 aa12.65□□□□□ -0.38
CUL4A-201ENST00000326335 TCHHQ07283 1943 aa12.65□□□□□ -0.39
CUL4A-201ENST00000326335 CAMTA1Q9Y6Y1 1673 aa12.64□□□□□ -0.39
CUL4A-201ENST00000326335 PSMA5P28066 241 aa12.64□□□□□ -0.39
CUL4A-201ENST00000326335 DNTTIP2Q5QJE6 756 aaKnown RBP12.64□□□□□ -0.39
CUL4A-201ENST00000326335 M0R2C6 588 aa12.64□□□□□ -0.39
CUL4A-201ENST00000326335 ATP2B1P20020 1258 aa12.64□□□□□ -0.39
CUL4A-201ENST00000326335 STOX1Q6ZVD7 989 aa12.64□□□□□ -0.39
CUL4A-201ENST00000326335 PTF1AQ7RTS3 328 aa12.64□□□□□ -0.39
CUL4A-201ENST00000326335 PIBF1Q8WXW3 757 aa12.64□□□□□ -0.39
CUL4A-201ENST00000326335 MYL10Q9BUA6 226 aa12.64□□□□□ -0.39
CUL4A-201ENST00000326335 POLR3DP05423 398 aaPredicted RBP12.64□□□□□ -0.39
CUL4A-201ENST00000326335 TCIRG1Q13488 830 aa12.64□□□□□ -0.39
CUL4A-201ENST00000326335 MIGA1Q8NAN2 632 aa12.64□□□□□ -0.39
CUL4A-201ENST00000326335 OSBP2Q969R2 916 aa12.64□□□□□ -0.39
CUL4A-201ENST00000326335 COL15A1P39059 1388 aa12.64□□□□□ -0.39
CUL4A-201ENST00000326335 AOX1Q06278 1338 aa12.63□□□□□ -0.39
CUL4A-201ENST00000326335 ATP5JP18859 108 aa12.63□□□□□ -0.39
CUL4A-201ENST00000326335 ZKSCAN3Q9BRR0 538 aa12.63□□□□□ -0.39
CUL4A-201ENST00000326335 ZSWIM6Q9HCJ5 1215 aa12.63□□□□□ -0.39
CUL4A-201ENST00000326335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.63□□□□□ -0.395e-7■■■□□ 16.5
CUL4A-201ENST00000326335 PHF14O94880 888 aa12.63□□□□□ -0.39
CUL4A-201ENST00000326335 RPS6KB1P23443 525 aa12.63□□□□□ -0.39
CUL4A-201ENST00000326335 ATP2B3Q16720 1220 aa12.63□□□□□ -0.39
CUL4A-201ENST00000326335 SLC9C2Q5TAH2 1124 aa12.63□□□□□ -0.39
CUL4A-201ENST00000326335 FAM43AQ8N2R8 423 aa12.63□□□□□ -0.39
CUL4A-201ENST00000326335 MTMR6Q9Y217 621 aa12.63□□□□□ -0.39
CUL4A-201ENST00000326335 H7C1W4 665 aa12.63□□□□□ -0.39
CUL4A-201ENST00000326335 DDB1Q16531 1140 aa12.63□□□□□ -0.39
CUL4A-201ENST00000326335 MPHOSPH8Q99549 860 aa12.63□□□□□ -0.39
CUL4A-201ENST00000326335 PUS7LQ9H0K6 701 aaKnown RBP12.63□□□□□ -0.39
CUL4A-201ENST00000326335 TSPY26PQ9H489 355 aa12.63□□□□□ -0.39
CUL4A-201ENST00000326335 IL15P40933 162 aaPredicted RBP12.62□□□□□ -0.39
CUL4A-201ENST00000326335 TOB2Q14106 344 aaPredicted RBP12.62□□□□□ -0.39
CUL4A-201ENST00000326335 KBTBD3Q8NAB2 608 aa12.62□□□□□ -0.39
CUL4A-201ENST00000326335 ERVV-2B6SEH9 535 aa12.62□□□□□ -0.39
CUL4A-201ENST00000326335 HIP1O00291 1037 aa12.62□□□□□ -0.39
CUL4A-201ENST00000326335 PHKA1P46020 1223 aa12.62□□□□□ -0.39
CUL4A-201ENST00000326335 CCDC191Q8NCU4 936 aa12.62□□□□□ -0.39
CUL4A-201ENST00000326335 RPAP1Q9BWH6 1393 aaPredicted RBP12.62□□□□□ -0.39
CUL4A-201ENST00000326335 ZNF609O15014 1411 aa12.62□□□□□ -0.39
CUL4A-201ENST00000326335 ISM2Q6H9L7 571 aa12.62□□□□□ -0.39
CUL4A-201ENST00000326335 CMTR1Q8N1G2 835 aaKnown RBP12.61□□□□□ -0.39
CUL4A-201ENST00000326335 NIP7Q9Y221 180 aaKnown RBP eCLIP12.61□□□□□ -0.39
CUL4A-201ENST00000326335 HSPD1P10809 573 aaKnown RBP12.61□□□□□ -0.39
CUL4A-201ENST00000326335 LIG1P18858 919 aa12.61□□□□□ -0.39
CUL4A-201ENST00000326335 SPATA32Q96LK8 384 aa12.61□□□□□ -0.39
CUL4A-201ENST00000326335 HAUS7Q99871 368 aa12.61□□□□□ -0.39
CUL4A-201ENST00000326335 NCAPD2Q15021 1401 aa12.61□□□□□ -0.39
CUL4A-201ENST00000326335 INTS4Q96HW7 963 aaKnown RBP12.61□□□□□ -0.39
CUL4A-201ENST00000326335 MAST3O60307 1309 aa12.6□□□□□ -0.39
CUL4A-201ENST00000326335 CASP7P55210 303 aa12.6□□□□□ -0.39
CUL4A-201ENST00000326335 NGLY1Q96IV0 654 aa12.6□□□□□ -0.39
CUL4A-201ENST00000326335 LRSAM1Q6UWE0 723 aa12.6□□□□□ -0.39
CUL4A-201ENST00000326335 TTC6Q86TZ1 520 aa12.6□□□□□ -0.39
CUL4A-201ENST00000326335 SLC51AQ86UW1 340 aa12.6□□□□□ -0.39
CUL4A-201ENST00000326335 ANKRD18BA2A2Z9 1011 aa12.6□□□□□ -0.39
CUL4A-201ENST00000326335 MBD3O95983 291 aa12.6□□□□□ -0.39
CUL4A-201ENST00000326335 RALYLQ86SE5 291 aaKnown RBP12.6□□□□□ -0.39
CUL4A-201ENST00000326335 MICU3Q86XE3 530 aa12.6□□□□□ -0.39
CUL4A-201ENST00000326335 DRC7Q8IY82 874 aa12.6□□□□□ -0.39
CUL4A-201ENST00000326335 CPLX1O14810 134 aa12.59□□□□□ -0.39
CUL4A-201ENST00000326335 PTMSP20962 102 aa12.59□□□□□ -0.39
CUL4A-201ENST00000326335 SCRN1Q12765 414 aa12.59□□□□□ -0.39
CUL4A-201ENST00000326335 NFXL1Q6ZNB6 911 aa12.59□□□□□ -0.39
CUL4A-201ENST00000326335 SYAP1Q96A49 352 aaPredicted RBP12.59□□□□□ -0.39
CUL4A-201ENST00000326335 AIFM3Q96NN9 605 aa12.59□□□□□ -0.39
CUL4A-201ENST00000326335 DACT1Q9NYF0 836 aa12.59□□□□□ -0.39
CUL4A-201ENST00000326335 PXDNLA1KZ92 1463 aa12.59□□□□□ -0.39
CUL4A-201ENST00000326335 LMTK3Q96Q04 1460 aa12.59□□□□□ -0.39
CUL4A-201ENST00000326335 NLRP10Q86W26 655 aa12.59□□□□□ -0.39
CUL4A-201ENST00000326335 TTC12Q9H892 705 aaPredicted RBP12.59□□□□□ -0.39
CUL4A-201ENST00000326335 SOS2Q07890 1332 aaPredicted RBP12.59□□□□□ -0.39
CUL4A-201ENST00000326335 E7EWF7 191 aa12.59□□□□□ -0.39
CUL4A-201ENST00000326335 hCG_1642624A0A1W2PR95 340 aa12.58□□□□□ -0.4
CUL4A-201ENST00000326335 UBE2Q2LH0YL09 131 aa12.58□□□□□ -0.4
CUL4A-201ENST00000326335 SMIM22K7EJ46 135 aa12.58□□□□□ -0.4
CUL4A-201ENST00000326335 RNF113AO15541 343 aaKnown RBP12.58□□□□□ -0.4
CUL4A-201ENST00000326335 BCAMP50895 628 aa12.58□□□□□ -0.4
CUL4A-201ENST00000326335 KRT85P78386 507 aa12.58□□□□□ -0.4
CUL4A-201ENST00000326335 ADAMTSL3P82987 1691 aa12.58□□□□□ -0.4
CUL4A-201ENST00000326335 USP54Q70EL1 1684 aa12.58□□□□□ -0.4
CUL4A-201ENST00000326335 MINDY4BA8MYZ0 360 aa12.58□□□□□ -0.4
CUL4A-201ENST00000326335 MCAMP43121 646 aa12.58□□□□□ -0.4
CUL4A-201ENST00000326335 RABL6Q3YEC7 729 aaPredicted RBP12.58□□□□□ -0.4
CUL4A-201ENST00000326335 TTLL11Q8NHH1 800 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms