RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 ST20-MTHFSA0A0A6YYL1 179 aa9.22□□□□□ -0.93
CSTF3-201ENST00000323959 MTHFSP49914 203 aa9.22□□□□□ -0.93
CSTF3-201ENST00000323959 CAP1Q01518 475 aa9.22□□□□□ -0.93
CSTF3-201ENST00000323959 NECAB2Q7Z6G3 386 aa9.22□□□□□ -0.93
CSTF3-201ENST00000323959 NFATC2IPQ8NCF5 419 aa9.22□□□□□ -0.93
CSTF3-201ENST00000323959 RBM17Q96I25 401 aaKnown RBP9.22□□□□□ -0.93
CSTF3-201ENST00000323959 FAM161BQ96MY7 647 aa9.22□□□□□ -0.93
CSTF3-201ENST00000323959 TEX13AQ9BXU3 409 aaPredicted RBP9.22□□□□□ -0.93
CSTF3-201ENST00000323959 NHLH1Q02575 133 aa9.22□□□□□ -0.93
CSTF3-201ENST00000323959 TTLL12Q14166 644 aaPredicted RBP9.22□□□□□ -0.93
CSTF3-201ENST00000323959 ZNF530Q6P9A1 599 aaPredicted RBP9.22□□□□□ -0.93
CSTF3-201ENST00000323959 ERMP1Q7Z2K6 904 aa9.22□□□□□ -0.93
CSTF3-201ENST00000323959 TMC1Q8TDI8 760 aa9.22□□□□□ -0.93
CSTF3-201ENST00000323959 TRIM47Q96LD4 638 aa9.22□□□□□ -0.93
CSTF3-201ENST00000323959 EYA1Q99502 592 aa9.22□□□□□ -0.93
CSTF3-201ENST00000323959 ZMYND8Q9ULU4 1186 aaPredicted RBP9.22□□□□□ -0.93
CSTF3-201ENST00000323959 IBTKQ9P2D0 1353 aaPredicted RBP9.22□□□□□ -0.93
CSTF3-201ENST00000323959 MKRN3Q13064 507 aaKnown RBP9.21□□□□□ -0.93
CSTF3-201ENST00000323959 RPGRQ92834 1020 aaKnown RBP9.21□□□□□ -0.93
CSTF3-201ENST00000323959 WNK4Q96J92 1243 aa9.21□□□□□ -0.93
CSTF3-201ENST00000323959 LAMB2P55268 1798 aa9.21□□□□□ -0.93
CSTF3-201ENST00000323959 COL1A1P02452 1464 aaPredicted RBP9.21□□□□□ -0.94
CSTF3-201ENST00000323959 FBLN1P23142 703 aa9.21□□□□□ -0.94
CSTF3-201ENST00000323959 MOB2Q70IA6 237 aa9.21□□□□□ -0.94
CSTF3-201ENST00000323959 ATP6V0A2Q9Y487 856 aa9.21□□□□□ -0.94
CSTF3-201ENST00000323959 MYCP01106 439 aaPredicted RBP9.2□□□□□ -0.94
CSTF3-201ENST00000323959 ZNF280AP59817 542 aaPredicted RBP9.2□□□□□ -0.94
CSTF3-201ENST00000323959 SMAD3P84022 425 aaKnown RBP9.2□□□□□ -0.94
CSTF3-201ENST00000323959 PTPN12Q05209 780 aaKnown RBP9.2□□□□□ -0.94
CSTF3-201ENST00000323959 ZFYVE28Q9HCC9 887 aa9.2□□□□□ -0.94
CSTF3-201ENST00000323959 C1orf141Q5JVX7 400 aa9.2□□□□□ -0.94
CSTF3-201ENST00000323959 CCER1Q8TC90 406 aaPredicted RBP9.2□□□□□ -0.94
CSTF3-201ENST00000323959 ZNF496Q96IT1 587 aaPredicted RBP9.2□□□□□ -0.94
CSTF3-201ENST00000323959 RNF208Q9H0X6 261 aa9.2□□□□□ -0.94
CSTF3-201ENST00000323959 SLC12A5Q9H2X9 1139 aa9.2□□□□□ -0.94
CSTF3-201ENST00000323959 ITGB8P26012 769 aa9.19□□□□□ -0.94
CSTF3-201ENST00000323959 HOXD10P28358 340 aa9.19□□□□□ -0.94
CSTF3-201ENST00000323959 AKNAD1Q5T1N1 836 aa9.19□□□□□ -0.94
CSTF3-201ENST00000323959 ANGEL2Q5VTE6 544 aaKnown RBP9.19□□□□□ -0.94
CSTF3-201ENST00000323959 NPM2Q86SE8 214 aaKnown RBP9.19□□□□□ -0.94
CSTF3-201ENST00000323959 EGFRP00533 1210 aa9.19□□□□□ -0.94
CSTF3-201ENST00000323959 GRK4P32298 578 aa9.19□□□□□ -0.94
CSTF3-201ENST00000323959 NYXQ9GZU5 481 aa9.19□□□□□ -0.94
CSTF3-201ENST00000323959 TBC1D2BQ9UPU7 963 aa9.19□□□□□ -0.94
CSTF3-201ENST00000323959 UNC80Q8N2C7 3258 aa9.19□□□□□ -0.94
CSTF3-201ENST00000323959 YDJCA8MPS7 323 aa9.18□□□□□ -0.94
CSTF3-201ENST00000323959 WDHD1O75717 1129 aaPredicted RBP9.18□□□□□ -0.94
CSTF3-201ENST00000323959 CRISPLD2Q9H0B8 497 aa9.18□□□□□ -0.94
CSTF3-201ENST00000323959 PSMD14O00487 310 aa9.18□□□□□ -0.94
CSTF3-201ENST00000323959 USP38Q8NB14 1042 aa9.18□□□□□ -0.94
CSTF3-201ENST00000323959 ZCCHC17Q9NP64 241 aaKnown RBP9.18□□□□□ -0.94
CSTF3-201ENST00000323959 ADGRA2Q96PE1 1338 aa9.18□□□□□ -0.94
CSTF3-201ENST00000323959 SCARF1Q14162 830 aa9.18□□□□□ -0.94
CSTF3-201ENST00000323959 SLC10A4Q96EP9 437 aa9.18□□□□□ -0.94
CSTF3-201ENST00000323959 RBM26Q5T8P6 1007 aaKnown RBP9.17□□□□□ -0.94
CSTF3-201ENST00000323959 SLAIN1Q8ND83 568 aa9.17□□□□□ -0.94
CSTF3-201ENST00000323959 HELBQ8NG08 1087 aaPredicted RBP9.17□□□□□ -0.94
CSTF3-201ENST00000323959 SLC52A2Q9HAB3 445 aa9.17□□□□□ -0.94
CSTF3-201ENST00000323959 SRRDQ9UH36 339 aa9.17□□□□□ -0.94
CSTF3-201ENST00000323959 COL3A1P02461 1466 aaPredicted RBP9.17□□□□□ -0.94
CSTF3-201ENST00000323959 DPP8Q6V1X1 898 aaPredicted RBP9.17□□□□□ -0.94
CSTF3-201ENST00000323959 EPHX3Q9H6B9 360 aa9.17□□□□□ -0.94
CSTF3-201ENST00000323959 PRR33A8MZF0 331 aa9.16□□□□□ -0.94
CSTF3-201ENST00000323959 SMIM22K7EJ46 135 aa9.16□□□□□ -0.94
CSTF3-201ENST00000323959 PSME4Q14997 1843 aa9.16□□□□□ -0.94
CSTF3-201ENST00000323959 HTTP42858 3142 aa9.16□□□□□ -0.94
CSTF3-201ENST00000323959 TFRCP02786 760 aaKnown RBP9.16□□□□□ -0.94
CSTF3-201ENST00000323959 LACTBP83111 547 aaPredicted RBP9.16□□□□□ -0.94
CSTF3-201ENST00000323959 DZIP3Q86Y13 1208 aaKnown RBP9.16□□□□□ -0.94
CSTF3-201ENST00000323959 TTYH1Q9H313 450 aaPredicted RBP9.16□□□□□ -0.94
CSTF3-201ENST00000323959 RIPOR2Q9Y4F9 1068 aa9.16□□□□□ -0.94
CSTF3-201ENST00000323959 LRRC37AA6NMS7 1700 aa9.16□□□□□ -0.94
CSTF3-201ENST00000323959 SP8Q8IXZ3 490 aa9.15□□□□□ -0.95
CSTF3-201ENST00000323959 RAET1EQ8TD07 263 aa9.15□□□□□ -0.95
CSTF3-201ENST00000323959 MKI67P46013 3256 aaKnown RBP9.15□□□□□ -0.95
CSTF3-201ENST00000323959 ASTN2O75129 1339 aaPredicted RBP9.15□□□□□ -0.95
CSTF3-201ENST00000323959 DUOX1Q9NRD9 1551 aa9.15□□□□□ -0.95
CSTF3-201ENST00000323959 ZSWIM8A7E2V4 1837 aa9.15□□□□□ -0.95
CSTF3-201ENST00000323959 PAWRQ96IZ0 340 aaKnown RBP9.14□□□□□ -0.95
CSTF3-201ENST00000323959 AAK1Q2M2I8 961 aa9.14□□□□□ -0.95
CSTF3-201ENST00000323959 TMC4Q7Z404 712 aa9.14□□□□□ -0.95
CSTF3-201ENST00000323959 AGBL3Q8NEM8 1001 aa9.14□□□□□ -0.95
CSTF3-201ENST00000323959 ABCC12Q96J65 1359 aa9.14□□□□□ -0.95
CSTF3-201ENST00000323959 TSPYL2Q9H2G4 693 aaPredicted RBP9.14□□□□□ -0.95
CSTF3-201ENST00000323959 MUC6Q6W4X9 2439 aa9.14□□□□□ -0.95
CSTF3-201ENST00000323959 TAF1CQ15572 869 aaPredicted RBP9.13□□□□□ -0.95
CSTF3-201ENST00000323959 C11orf16Q9NQ32 467 aa9.13□□□□□ -0.95
CSTF3-201ENST00000323959 CXXC1Q9P0U4 656 aaPredicted RBP9.13□□□□□ -0.95
CSTF3-201ENST00000323959 FYB1O15117 783 aa9.13□□□□□ -0.95
CSTF3-201ENST00000323959 VIL1P09327 827 aaKnown RBP9.13□□□□□ -0.95
CSTF3-201ENST00000323959 SYN1P17600 705 aa9.13□□□□□ -0.95
CSTF3-201ENST00000323959 GTF2E1P29083 439 aaPredicted RBP9.13□□□□□ -0.95
CSTF3-201ENST00000323959 MMP14P50281 582 aa9.13□□□□□ -0.95
CSTF3-201ENST00000323959 KCTD2Q14681 263 aa9.13□□□□□ -0.95
CSTF3-201ENST00000323959 UNC93B1Q9H1C4 597 aa9.13□□□□□ -0.95
CSTF3-201ENST00000323959 NIP7Q9Y221 180 aaKnown RBP eCLIP9.13□□□□□ -0.95
CSTF3-201ENST00000323959 PKD1L2Q7Z442 2459 aa9.13□□□□□ -0.95
CSTF3-201ENST00000323959 DDX60LQ5H9U9 1706 aaKnown RBP9.13□□□□□ -0.95
CSTF3-201ENST00000323959 BBOX1O75936 387 aa9.12□□□□□ -0.95
CSTF3-201ENST00000323959 NBPF3Q9H094 633 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms