RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 USP26Q9BXU7 913 aa12.51□□□□□ -0.41
SNRNP200-201ENST00000323853 CCDC113Q9H0I3 377 aa12.51□□□□□ -0.41
SNRNP200-201ENST00000323853 VAT1LQ9HCJ6 419 aa12.51□□□□□ -0.41
SNRNP200-201ENST00000323853 BMP15O95972 392 aa12.51□□□□□ -0.41
SNRNP200-201ENST00000323853 TRIM21P19474 475 aaKnown RBP12.51□□□□□ -0.41
SNRNP200-201ENST00000323853 AOPEPQ8N6M6 819 aa12.51□□□□□ -0.41
SNRNP200-201ENST00000323853 TCEANC2Q96MN5 208 aa12.51□□□□□ -0.41
SNRNP200-201ENST00000323853 ADGRL2O95490 1459 aa12.51□□□□□ -0.41
SNRNP200-201ENST00000323853 GCOM1H8Y6P7 765 aaPredicted RBP12.51□□□□□ -0.41
SNRNP200-201ENST00000323853 MYZAPP0CAP1 466 aa12.51□□□□□ -0.41
SNRNP200-201ENST00000323853 CREB3L3Q68CJ9 461 aa12.51□□□□□ -0.41
SNRNP200-201ENST00000323853 TMTC2Q8N394 836 aa12.51□□□□□ -0.41
SNRNP200-201ENST00000323853 RNF113AO15541 343 aaKnown RBP12.51□□□□□ -0.41
SNRNP200-201ENST00000323853 EZRP15311 586 aaKnown RBP12.51□□□□□ -0.41
SNRNP200-201ENST00000323853 SLC39A6Q13433 755 aa12.51□□□□□ -0.41
SNRNP200-201ENST00000323853 ATP2B3Q16720 1220 aa12.51□□□□□ -0.41
SNRNP200-201ENST00000323853 EHBP1Q8NDI1 1231 aa12.51□□□□□ -0.41
SNRNP200-201ENST00000323853 CCDC91Q7Z6B0 441 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 DNAJC25Q9H1X3 360 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 DACT1Q9NYF0 836 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 CYP7A1P22680 504 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 UBA7P41226 1012 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 TRIM47Q96LD4 638 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 GNG11P61952 73 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 BMS1Q14692 1282 aaKnown RBP12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 CTR9Q6PD62 1173 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 DNAI2Q9GZS0 605 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 BCCIPQ9P287 314 aaKnown RBP eCLIP12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 BLMP54132 1417 aaPredicted RBP12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 PRC1O43663 620 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 NEBLO76041 1014 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 PRIM1P49642 420 aaKnown RBP12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 LMBR1LQ6UX01 489 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 RAD50Q92878 1312 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 SEC24BO95487 1268 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 CHMLP26374 656 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 DHX37Q8IY37 1157 aaKnown RBP12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 YTHDC2Q9H6S0 1430 aaKnown RBP12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 SOS1Q07889 1333 aaPredicted RBP12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 STAT6P42226 847 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 AFMP43652 599 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 MICALCLQ6ZW33 695 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 ESR2Q92731 530 aa12.5□□□□□ -0.41
SNRNP200-201ENST00000323853 TSPY3P0CV98 308 aa12.49□□□□□ -0.41
SNRNP200-201ENST00000323853 TSPY8P0CW00 308 aa12.49□□□□□ -0.41
SNRNP200-201ENST00000323853 RTL9Q8NET4 1388 aa12.49□□□□□ -0.41
SNRNP200-201ENST00000323853 KDM5AP29375 1690 aaKnown RBP12.49□□□□□ -0.41
SNRNP200-201ENST00000323853 SKILP12757 684 aa12.49□□□□□ -0.41
SNRNP200-201ENST00000323853 CALCOCO1Q9P1Z2 691 aa12.49□□□□□ -0.41
SNRNP200-201ENST00000323853 EIF4G3O43432 1585 aaKnown RBP12.49□□□□□ -0.41
SNRNP200-201ENST00000323853 N4BP3O15049 544 aa12.49□□□□□ -0.41
SNRNP200-201ENST00000323853 TFCP2Q12800 502 aa12.49□□□□□ -0.41
SNRNP200-201ENST00000323853 CCDC186Q7Z3E2 898 aa12.49□□□□□ -0.41
SNRNP200-201ENST00000323853 STXBP4Q6ZWJ1 553 aa12.49□□□□□ -0.41
SNRNP200-201ENST00000323853 KRI1Q8N9T8 703 aaKnown RBP12.49□□□□□ -0.41
SNRNP200-201ENST00000323853 INTS4Q96HW7 963 aaKnown RBP12.49□□□□□ -0.41
SNRNP200-201ENST00000323853 ZBTB7BO15156 539 aaPredicted RBP12.49□□□□□ -0.41
SNRNP200-201ENST00000323853 HLA-DOAP06340 250 aa12.49□□□□□ -0.41
SNRNP200-201ENST00000323853 TYRO3Q06418 890 aa12.49□□□□□ -0.41
SNRNP200-201ENST00000323853 ZGPATQ8N5A5 531 aaKnown RBP12.49□□□□□ -0.41
SNRNP200-201ENST00000323853 PHACTR3Q96KR7 559 aa12.49□□□□□ -0.41
SNRNP200-201ENST00000323853 JADE2Q9NQC1 790 aa12.49□□□□□ -0.41
SNRNP200-201ENST00000323853 C6orf229H3BNL8 230 aa12.48□□□□□ -0.41
SNRNP200-201ENST00000323853 IDEP14735 1019 aa12.48□□□□□ -0.41
SNRNP200-201ENST00000323853 ABCA5Q8WWZ7 1642 aa12.48□□□□□ -0.41
SNRNP200-201ENST00000323853 KDM2BQ8NHM5 1336 aa12.48□□□□□ -0.41
SNRNP200-201ENST00000323853 PLXNC1O60486 1568 aa12.48□□□□□ -0.41
SNRNP200-201ENST00000323853 TMCO5BA8MYB1 307 aa12.48□□□□□ -0.41
SNRNP200-201ENST00000323853 ST5P78524 1137 aa12.48□□□□□ -0.41
SNRNP200-201ENST00000323853 MARCKSP29966 332 aaPredicted RBP12.48□□□□□ -0.41
SNRNP200-201ENST00000323853 CKAP4Q07065 602 aaKnown RBP12.48□□□□□ -0.41
SNRNP200-201ENST00000323853 CETN1Q12798 172 aa12.48□□□□□ -0.41
SNRNP200-201ENST00000323853 CTNNBL1Q8WYA6 563 aaPredicted RBP12.48□□□□□ -0.41
SNRNP200-201ENST00000323853 LRRC59Q96AG4 307 aaKnown RBP12.48□□□□□ -0.41
SNRNP200-201ENST00000323853 ZKSCAN5Q9Y2L8 839 aa12.48□□□□□ -0.41
SNRNP200-201ENST00000323853 APOBRQ0VD83 1088 aa12.48□□□□□ -0.41
SNRNP200-201ENST00000323853 KRT24Q2M2I5 525 aa12.48□□□□□ -0.41
SNRNP200-201ENST00000323853 SMARCC1Q92922 1105 aaPredicted RBP12.48□□□□□ -0.41
SNRNP200-201ENST00000323853 PER1O15534 1290 aaPredicted RBP12.47□□□□□ -0.41
SNRNP200-201ENST00000323853 NPC1L1Q9UHC9 1359 aa12.47□□□□□ -0.41
SNRNP200-201ENST00000323853 SLC9C2Q5TAH2 1124 aa12.47□□□□□ -0.41
SNRNP200-201ENST00000323853 MAGEB6P1A0A0J9YX57 407 aa12.47□□□□□ -0.41
SNRNP200-201ENST00000323853 TCERG1LQ5VWI1 586 aa12.47□□□□□ -0.41
SNRNP200-201ENST00000323853 LINS1Q8NG48 757 aa12.47□□□□□ -0.41
SNRNP200-201ENST00000323853 TAOK3Q9H2K8 898 aa12.47□□□□□ -0.41
SNRNP200-201ENST00000323853 BICC1Q9H694 974 aaKnown RBP12.47□□□□□ -0.41
SNRNP200-201ENST00000323853 SPTLC2O15270 562 aa12.47□□□□□ -0.41
SNRNP200-201ENST00000323853 HOXC9P31274 260 aa12.47□□□□□ -0.41
SNRNP200-201ENST00000323853 GNAT2P19087 354 aa12.47□□□□□ -0.41
SNRNP200-201ENST00000323853 IFI16Q16666 785 aaKnown RBP12.47□□□□□ -0.41
SNRNP200-201ENST00000323853 CWF19L2Q2TBE0 894 aaKnown RBP12.47□□□□□ -0.41
SNRNP200-201ENST00000323853 HEATR3Q7Z4Q2 680 aa12.47□□□□□ -0.41
SNRNP200-201ENST00000323853 FAM107BQ9H098 131 aa12.47□□□□□ -0.41
SNRNP200-201ENST00000323853 SYT1P21579 422 aa12.46□□□□□ -0.41
SNRNP200-201ENST00000323853 GTF2F1P35269 517 aaKnown RBP eCLIP12.46□□□□□ -0.41
SNRNP200-201ENST00000323853 KRT2P35908 639 aa12.46□□□□□ -0.41
SNRNP200-201ENST00000323853 SCLT1Q96NL6 688 aa12.46□□□□□ -0.41
SNRNP200-201ENST00000323853 NBPF7P0C2Y1 421 aaPredicted RBP12.46□□□□□ -0.41
SNRNP200-201ENST00000323853 UTP14AQ9BVJ6 771 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms