RNA–Protein interactions for RNA: ENST00000321027.7

GCFC2-201, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCFC2, Length 4,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-201ENST00000321027 FAM135BQ49AJ0 1406 aa17.83■□□□□ 0.45
GCFC2-201ENST00000321027 ARHGEF10O15013 1369 aa17.83■□□□□ 0.44
GCFC2-201ENST00000321027 GOLGA8AA7E2F4 631 aa17.83■□□□□ 0.44
GCFC2-201ENST00000321027 HSPA4P34932 840 aa17.83■□□□□ 0.44
GCFC2-201ENST00000321027 TFCP2Q12800 502 aa17.83■□□□□ 0.44
GCFC2-201ENST00000321027 CCDC129Q6ZRS4 1044 aa17.83■□□□□ 0.44
GCFC2-201ENST00000321027 AOPEPQ8N6M6 819 aa17.83■□□□□ 0.44
GCFC2-201ENST00000321027 ACSBG1Q96GR2 724 aa17.83■□□□□ 0.44
GCFC2-201ENST00000321027 SLC12A7Q9Y666 1083 aa17.83■□□□□ 0.44
GCFC2-201ENST00000321027 AATKQ6ZMQ8 1374 aa17.83■□□□□ 0.44
GCFC2-201ENST00000321027 TMCO3Q6UWJ1 677 aa17.82■□□□□ 0.44
GCFC2-201ENST00000321027 LEKR1Q6ZMV7 388 aa17.82■□□□□ 0.44
GCFC2-201ENST00000321027 RNF17Q9BXT8 1623 aaKnown RBP17.82■□□□□ 0.44
GCFC2-201ENST00000321027 NEMFO60524 1076 aa17.82■□□□□ 0.44
GCFC2-201ENST00000321027 ARHGAP29Q52LW3 1261 aa17.82■□□□□ 0.44
GCFC2-201ENST00000321027 ZPR1O75312 459 aa17.82■□□□□ 0.44
GCFC2-201ENST00000321027 CAVIN2O95810 425 aa17.82■□□□□ 0.44
GCFC2-201ENST00000321027 MARCKSP29966 332 aaPredicted RBP17.82■□□□□ 0.44
GCFC2-201ENST00000321027 UNC5CLQ8IV45 518 aa17.82■□□□□ 0.44
GCFC2-201ENST00000321027 KCNQ3O43525 872 aa17.82■□□□□ 0.44
GCFC2-201ENST00000321027 WASF1Q92558 559 aa17.82■□□□□ 0.44
GCFC2-201ENST00000321027 IARSP41252 1262 aaKnown RBP17.81■□□□□ 0.44
GCFC2-201ENST00000321027 SNW1Q13573 536 aaKnown RBP17.81■□□□□ 0.44
GCFC2-201ENST00000321027 IGSF3O75054 1194 aa17.81■□□□□ 0.44
GCFC2-201ENST00000321027 GSDMDP57764 484 aa17.81■□□□□ 0.44
GCFC2-201ENST00000321027 ATP7BP35670 1465 aa17.81■□□□□ 0.44
GCFC2-201ENST00000321027 CLASP1Q7Z460 1538 aa17.81■□□□□ 0.44
GCFC2-201ENST00000321027 EIF4A1P60842 406 aaKnown RBP17.81■□□□□ 0.44
GCFC2-201ENST00000321027 HOXB7P09629 217 aa17.8■□□□□ 0.44
GCFC2-201ENST00000321027 MAP3K12Q12852 859 aa17.8■□□□□ 0.44
GCFC2-201ENST00000321027 SOGA3Q5TF21 947 aa17.8■□□□□ 0.44
GCFC2-201ENST00000321027 KIAA0232Q92628 1395 aa17.8■□□□□ 0.44
GCFC2-201ENST00000321027 EPB41L2O43491 1005 aaKnown RBP17.8■□□□□ 0.44
GCFC2-201ENST00000321027 NCOA7Q8NI08 942 aa17.8■□□□□ 0.44
GCFC2-201ENST00000321027 TSC1Q92574 1164 aa17.8■□□□□ 0.44
GCFC2-201ENST00000321027 MRPS27Q92552 414 aaKnown RBP17.8■□□□□ 0.44
GCFC2-201ENST00000321027 SLC5A1P13866 664 aa17.8■□□□□ 0.44
GCFC2-201ENST00000321027 LMOD1P29536 600 aaPredicted RBP17.8■□□□□ 0.44
GCFC2-201ENST00000321027 METAP2P50579 478 aaKnown RBP eCLIP17.8■□□□□ 0.44
GCFC2-201ENST00000321027 CCDC181Q5TID7 509 aa17.8■□□□□ 0.44
GCFC2-201ENST00000321027 EDC3Q96F86 508 aaKnown RBP17.8■□□□□ 0.44
GCFC2-201ENST00000321027 PHF23Q9BUL5 403 aaPredicted RBP17.8■□□□□ 0.44
GCFC2-201ENST00000321027 CGNQ9P2M7 1197 aaKnown RBP17.8■□□□□ 0.44
GCFC2-201ENST00000321027 SLC27A2O14975 620 aa17.79■□□□□ 0.44
GCFC2-201ENST00000321027 TIMM10P62072 90 aa17.79■□□□□ 0.44
GCFC2-201ENST00000321027 TMEM67Q5HYA8 995 aa17.79■□□□□ 0.44
GCFC2-201ENST00000321027 PPP1R9BQ96SB3 815 aa17.79■□□□□ 0.44
GCFC2-201ENST00000321027 PTPDC1A2A3K4 754 aa17.79■□□□□ 0.44
GCFC2-201ENST00000321027 POLR3GO15318 223 aaPredicted RBP17.79■□□□□ 0.44
GCFC2-201ENST00000321027 ZSCAN12O43309 604 aa17.79■□□□□ 0.44
GCFC2-201ENST00000321027 CAVIN4Q5BKX8 364 aa17.79■□□□□ 0.44
GCFC2-201ENST00000321027 ZNF496Q96IT1 587 aaPredicted RBP17.79■□□□□ 0.44
GCFC2-201ENST00000321027 PAG1Q9NWQ8 432 aa17.79■□□□□ 0.44
GCFC2-201ENST00000321027 CENPHQ9H3R5 247 aa17.78■□□□□ 0.44
GCFC2-201ENST00000321027 SYKP43405 635 aa17.78■□□□□ 0.44
GCFC2-201ENST00000321027 SLC26A6Q9BXS9 759 aa17.78■□□□□ 0.44
GCFC2-201ENST00000321027 RANBP6O60518 1105 aaKnown RBP17.78■□□□□ 0.44
GCFC2-201ENST00000321027 ZSWIM4Q9H7M6 989 aa17.78■□□□□ 0.44
GCFC2-201ENST00000321027 BTG4Q9NY30 223 aa17.78■□□□□ 0.44
GCFC2-201ENST00000321027 SPHKAPQ2M3C7 1700 aa17.78■□□□□ 0.44
GCFC2-201ENST00000321027 USP6P35125 1406 aa17.78■□□□□ 0.44
GCFC2-201ENST00000321027 FAM193AP78312 1265 aa17.78■□□□□ 0.44
GCFC2-201ENST00000321027 PAXBP1Q9Y5B6 917 aa17.78■□□□□ 0.44
GCFC2-201ENST00000321027 NLRP1Q9C000 1473 aa17.77■□□□□ 0.44
GCFC2-201ENST00000321027 IL15P40933 162 aaPredicted RBP17.77■□□□□ 0.44
GCFC2-201ENST00000321027 CDC37L1Q7L3B6 337 aa17.77■□□□□ 0.44
GCFC2-201ENST00000321027 DBNDD2Q9BQY9 259 aa17.77■□□□□ 0.44
GCFC2-201ENST00000321027 ERLIN1O75477 346 aa17.77■□□□□ 0.44
GCFC2-201ENST00000321027 ZNF853P0CG23 659 aa17.77■□□□□ 0.44
GCFC2-201ENST00000321027 DDB1Q16531 1140 aa17.77■□□□□ 0.44
GCFC2-201ENST00000321027 DHX32Q7L7V1 743 aaKnown RBP17.77■□□□□ 0.44
GCFC2-201ENST00000321027 SSH3Q8TE77 659 aa17.77■□□□□ 0.44
GCFC2-201ENST00000321027 EIF5P55010 431 aaKnown RBP17.77■□□□□ 0.43
GCFC2-201ENST00000321027 PTH1RQ03431 593 aa17.77■□□□□ 0.43
GCFC2-201ENST00000321027 SSRP1Q08945 709 aaKnown RBP17.77■□□□□ 0.43
GCFC2-201ENST00000321027 SYCP1Q15431 976 aa17.77■□□□□ 0.43
GCFC2-201ENST00000321027 CCDC102BQ68D86 513 aa17.77■□□□□ 0.43
GCFC2-201ENST00000321027 SLC52A2Q9HAB3 445 aa17.77■□□□□ 0.43
GCFC2-201ENST00000321027 RPS6KB1P23443 525 aa17.76■□□□□ 0.43
GCFC2-201ENST00000321027 SUCLG2Q96I99 432 aa17.76■□□□□ 0.43
GCFC2-201ENST00000321027 ALG1Q9BT22 464 aa17.76■□□□□ 0.43
GCFC2-201ENST00000321027 NCOA5Q9HCD5 579 aaKnown RBP17.76■□□□□ 0.43
GCFC2-201ENST00000321027 A2ML1A8K2U0 1454 aa17.76■□□□□ 0.43
GCFC2-201ENST00000321027 ATP2B3Q16720 1220 aa17.76■□□□□ 0.43
GCFC2-201ENST00000321027 KIF4BQ2VIQ3 1234 aa17.76■□□□□ 0.43
GCFC2-201ENST00000321027 RASEFQ8IZ41 740 aa17.76■□□□□ 0.43
GCFC2-201ENST00000321027 ABCA9Q8IUA7 1624 aa17.76■□□□□ 0.43
GCFC2-201ENST00000321027 LUC7LQ9NQ29 371 aaKnown RBP17.76■□□□□ 0.43
GCFC2-201ENST00000321027 KIF24Q5T7B8 1368 aa17.76■□□□□ 0.43
GCFC2-201ENST00000321027 E9PCH4 1651 aa17.76■□□□□ 0.43
GCFC2-201ENST00000321027 PCDH11XQ9BZA7 1347 aa17.76■□□□□ 0.43
GCFC2-201ENST00000321027 PCDH11YQ9BZA8 1340 aa17.76■□□□□ 0.43
GCFC2-201ENST00000321027 UBASH3AP57075 661 aa17.75■□□□□ 0.43
GCFC2-201ENST00000321027 MAPK8IP2Q13387 824 aaPredicted RBP17.75■□□□□ 0.43
GCFC2-201ENST00000321027 ME3Q16798 604 aa17.75■□□□□ 0.43
GCFC2-201ENST00000321027 TRERF1Q96PN7 1200 aa17.75■□□□□ 0.43
GCFC2-201ENST00000321027 CEP131Q9UPN4 1083 aa17.75■□□□□ 0.43
GCFC2-201ENST00000321027 CCDC196A0A1B0GTZ2 297 aa17.75■□□□□ 0.43
GCFC2-201ENST00000321027 A0A1B0GVL5 298 aa17.75■□□□□ 0.43
GCFC2-201ENST00000321027 PRC1O43663 620 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms