RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 GPR108Q9NPR9 543 aa33.7■■■□□ 2.99
CTDNEP1-201ENST00000318988 FPGT-TNNI3KV9GXZ4 949 aa33.7■■■□□ 2.99
CTDNEP1-201ENST00000318988 LRP5O75197 1615 aa33.7■■■□□ 2.99
CTDNEP1-201ENST00000318988 ANKRD31Q8N7Z5 1873 aa33.69■■■□□ 2.98
CTDNEP1-201ENST00000318988 ALDH1B1P30837 517 aa33.69■■■□□ 2.98
CTDNEP1-201ENST00000318988 BBOX1O75936 387 aa33.68■■■□□ 2.98
CTDNEP1-201ENST00000318988 EAF2Q96CJ1 260 aaPredicted RBP33.68■■■□□ 2.98
CTDNEP1-201ENST00000318988 GPATCH3Q96I76 525 aa33.68■■■□□ 2.98
CTDNEP1-201ENST00000318988 C10orf71Q711Q0 1435 aa33.67■■■□□ 2.98
CTDNEP1-201ENST00000318988 PLEKHM2Q8IWE5 1019 aa33.67■■■□□ 2.98
CTDNEP1-201ENST00000318988 OTUD7AQ8TE49 926 aaPredicted RBP33.67■■■□□ 2.98
CTDNEP1-201ENST00000318988 ZNF622Q969S3 477 aaKnown RBP eCLIP33.67■■■□□ 2.98
CTDNEP1-201ENST00000318988 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP33.67■■■□□ 2.98
CTDNEP1-201ENST00000318988 PDE8BO95263 885 aa33.66■■■□□ 2.98
CTDNEP1-201ENST00000318988 MX1P20591 662 aa33.66■■■□□ 2.98
CTDNEP1-201ENST00000318988 CHRNDQ07001 517 aa33.66■■■□□ 2.98
CTDNEP1-201ENST00000318988 NEUROD6Q96NK8 337 aa33.66■■■□□ 2.98
CTDNEP1-201ENST00000318988 CCDC8Q9H0W5 538 aaPredicted RBP33.65■■■□□ 2.98
CTDNEP1-201ENST00000318988 STYK1Q6J9G0 422 aa33.64■■■□□ 2.98
CTDNEP1-201ENST00000318988 TMC4Q7Z404 712 aa33.64■■■□□ 2.98
CTDNEP1-201ENST00000318988 HELBQ8NG08 1087 aaPredicted RBP33.64■■■□□ 2.98
CTDNEP1-201ENST00000318988 ANKRD2Q9GZV1 360 aa33.64■■■□□ 2.98
CTDNEP1-201ENST00000318988 MINPP1Q9UNW1 487 aa33.64■■■□□ 2.98
CTDNEP1-201ENST00000318988 ATP2B3Q16720 1220 aa33.63■■■□□ 2.97
CTDNEP1-201ENST00000318988 SPEF2Q9C093 1822 aa33.63■■■□□ 2.97
CTDNEP1-201ENST00000318988 PDE1AP54750 535 aa33.63■■■□□ 2.97
CTDNEP1-201ENST00000318988 PUM3Q15397 648 aaKnown RBP33.63■■■□□ 2.97
CTDNEP1-201ENST00000318988 VGLL2Q8N8G2 317 aa33.63■■■□□ 2.97
CTDNEP1-201ENST00000318988 SPON1Q9HCB6 807 aa33.63■■■□□ 2.97
CTDNEP1-201ENST00000318988 A0A1B0GUL7 405 aa33.62■■■□□ 2.97
CTDNEP1-201ENST00000318988 TMX4Q9H1E5 349 aaPredicted RBP33.62■■■□□ 2.97
CTDNEP1-201ENST00000318988 TAF1P21675 1872 aa33.62■■■□□ 2.97
CTDNEP1-201ENST00000318988 PPEF1O14829 653 aaPredicted RBP33.61■■■□□ 2.97
CTDNEP1-201ENST00000318988 CHRNA5P30532 468 aa33.61■■■□□ 2.97
CTDNEP1-201ENST00000318988 TIMM10P62072 90 aa33.61■■■□□ 2.97
CTDNEP1-201ENST00000318988 COL4A1P02462 1669 aa33.61■■■□□ 2.97
CTDNEP1-201ENST00000318988 ZNF609O15014 1411 aa33.6■■■□□ 2.97
CTDNEP1-201ENST00000318988 TAF5LO75529 589 aa33.6■■■□□ 2.97
CTDNEP1-201ENST00000318988 CNKSR1Q969H4 720 aa33.6■■■□□ 2.97
CTDNEP1-201ENST00000318988 STAP2Q9UGK3 403 aa33.6■■■□□ 2.97
CTDNEP1-201ENST00000318988 SALL3Q9BXA9 1300 aa33.6■■■□□ 2.97
CTDNEP1-201ENST00000318988 GORABQ5T7V8 394 aa33.59■■■□□ 2.97
CTDNEP1-201ENST00000318988 LPIN2Q92539 896 aa33.59■■■□□ 2.97
CTDNEP1-201ENST00000318988 SGIP1Q9BQI5 828 aa33.59■■■□□ 2.97
CTDNEP1-201ENST00000318988 OSBPL3Q9H4L5 887 aa33.59■■■□□ 2.97
CTDNEP1-201ENST00000318988 TTC41PQ6P2S7 1318 aa33.59■■■□□ 2.97
CTDNEP1-201ENST00000318988 SLC5A1P13866 664 aa33.58■■■□□ 2.97
CTDNEP1-201ENST00000318988 KCNJ4P48050 445 aa33.58■■■□□ 2.97
CTDNEP1-201ENST00000318988 ECHDC1Q9NTX5 307 aa33.58■■■□□ 2.97
CTDNEP1-201ENST00000318988 PPP1R1BQ9UD71 204 aaPredicted RBP33.58■■■□□ 2.97
CTDNEP1-201ENST00000318988 AOX1Q06278 1338 aa33.58■■■□□ 2.97
CTDNEP1-201ENST00000318988 ERC2O15083 957 aa33.58■■■□□ 2.97
CTDNEP1-201ENST00000318988 IFIT1P09914 478 aaKnown RBP33.58■■■□□ 2.97
CTDNEP1-201ENST00000318988 PTGER2P43116 358 aa33.58■■■□□ 2.97
CTDNEP1-201ENST00000318988 DBNDD2Q9BQY9 259 aa33.58■■■□□ 2.97
CTDNEP1-201ENST00000318988 TLR7Q9NYK1 1049 aaKnown RBP33.58■■■□□ 2.97
CTDNEP1-201ENST00000318988 ANKIB1Q9P2G1 1089 aa33.58■■■□□ 2.97
CTDNEP1-201ENST00000318988 DBNLQ9UJU6 430 aaKnown RBP33.58■■■□□ 2.97
CTDNEP1-201ENST00000318988 COL11A2P13942 1736 aaPredicted RBP33.56■■■□□ 2.96
CTDNEP1-201ENST00000318988 TGFB2P61812 414 aa33.56■■■□□ 2.96
CTDNEP1-201ENST00000318988 KLHL34Q8N239 644 aa33.56■■■□□ 2.96
CTDNEP1-201ENST00000318988 TSHZ3Q63HK5 1081 aa33.55■■■□□ 2.96
CTDNEP1-201ENST00000318988 SP8Q8IXZ3 490 aa33.55■■■□□ 2.96
CTDNEP1-201ENST00000318988 UBE4AQ14139 1066 aa33.54■■■□□ 2.96
CTDNEP1-201ENST00000318988 XAGE2Q96GT9 111 aa33.54■■■□□ 2.96
CTDNEP1-201ENST00000318988 ATP6V0A2Q9Y487 856 aa33.54■■■□□ 2.96
CTDNEP1-201ENST00000318988 GLRX3O76003 335 aaKnown RBP33.53■■■□□ 2.96
CTDNEP1-201ENST00000318988 FGFR2P21802 821 aa33.53■■■□□ 2.96
CTDNEP1-201ENST00000318988 CCDC158Q5M9N0 1113 aa33.53■■■□□ 2.96
CTDNEP1-201ENST00000318988 TTC22Q5TAA0 569 aa33.53■■■□□ 2.96
CTDNEP1-201ENST00000318988 CD2APQ9Y5K6 639 aa33.53■■■□□ 2.96
CTDNEP1-201ENST00000318988 XDHP47989 1333 aa33.53■■■□□ 2.96
CTDNEP1-201ENST00000318988 A0A0G2JLW4 131 aa33.53■■■□□ 2.96
CTDNEP1-201ENST00000318988 DPEP1P16444 411 aa33.53■■■□□ 2.96
CTDNEP1-201ENST00000318988 PRPF40BQ6NWY9 871 aaKnown RBP33.52■■■□□ 2.96
CTDNEP1-201ENST00000318988 ADORA1P30542 326 aa33.51■■■□□ 2.95
CTDNEP1-201ENST00000318988 NSFL1CQ9UNZ2 370 aaKnown RBP33.51■■■□□ 2.95
CTDNEP1-201ENST00000318988 LEMD3Q9Y2U8 911 aa33.51■■■□□ 2.95
CTDNEP1-201ENST00000318988 BMP2KLQ5H9B9 411 aa33.5■■■□□ 2.95
CTDNEP1-201ENST00000318988 TTLL6Q8N841 843 aa33.5■■■□□ 2.95
CTDNEP1-201ENST00000318988 SNAP23O00161 211 aa33.49■■■□□ 2.95
CTDNEP1-201ENST00000318988 TTC39AQ5SRH9 613 aa33.49■■■□□ 2.95
CTDNEP1-201ENST00000318988 GPSM2P81274 684 aa33.48■■■□□ 2.95
CTDNEP1-201ENST00000318988 PI4K2BQ8TCG2 481 aa33.48■■■□□ 2.95
CTDNEP1-201ENST00000318988 ZNF804BA4D1E1 1349 aa33.48■■■□□ 2.95
CTDNEP1-201ENST00000318988 KIF13BQ9NQT8 1826 aa33.48■■■□□ 2.95
CTDNEP1-201ENST00000318988 ATP5JP18859 108 aa33.48■■■□□ 2.95
CTDNEP1-201ENST00000318988 ATP2B4P23634 1241 aa33.48■■■□□ 2.95
CTDNEP1-201ENST00000318988 GGA1Q9UJY5 639 aa33.48■■■□□ 2.95
CTDNEP1-201ENST00000318988 SOCS7O14512 581 aa33.47■■■□□ 2.95
CTDNEP1-201ENST00000318988 CAVIN4Q5BKX8 364 aa33.46■■■□□ 2.95
CTDNEP1-201ENST00000318988 PODXL2Q9NZ53 605 aa33.46■■■□□ 2.95
CTDNEP1-201ENST00000318988 PIM2Q9P1W9 311 aa33.46■■■□□ 2.95
CTDNEP1-201ENST00000318988 TRIM6-TRIM34B2RNG4 842 aa33.45■■■□□ 2.95
CTDNEP1-201ENST00000318988 GSPT1P15170 499 aaKnown RBP33.45■■■□□ 2.95
CTDNEP1-201ENST00000318988 UFL1O94874 794 aa33.44■■■□□ 2.94
CTDNEP1-201ENST00000318988 MPNDQ8N594 471 aa33.44■■■□□ 2.94
CTDNEP1-201ENST00000318988 BOLA2Q9H3K6 86 aa33.44■■■□□ 2.94
CTDNEP1-201ENST00000318988 KCNA3P22001 575 aa33.43■■■□□ 2.94
CTDNEP1-201ENST00000318988 CC2D2BQ6DHV5 1058 aa33.43■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms