RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 SLC30A3Q99726 388 aa6.2□□□□□ -1.42
SMCO3-201ENST00000316048 EHD4Q9H223 541 aa6.2□□□□□ -1.42
SMCO3-201ENST00000316048 ATP13A2Q9NQ11 1180 aa6.2□□□□□ -1.42
SMCO3-201ENST00000316048 GIPC1O14908 333 aa6.2□□□□□ -1.42
SMCO3-201ENST00000316048 CD33P20138 364 aa6.2□□□□□ -1.42
SMCO3-201ENST00000316048 TNP2Q05952 138 aa6.2□□□□□ -1.42
SMCO3-201ENST00000316048 CCINQ13939 588 aa6.2□□□□□ -1.42
SMCO3-201ENST00000316048 DBN1Q16643 649 aa6.2□□□□□ -1.42
SMCO3-201ENST00000316048 CTC1Q2NKJ3 1217 aa6.2□□□□□ -1.42
SMCO3-201ENST00000316048 HHIPQ96QV1 700 aa6.2□□□□□ -1.42
SMCO3-201ENST00000316048 NUCKS1Q9H1E3 243 aaKnown RBP6.2□□□□□ -1.42
SMCO3-201ENST00000316048 ABCB6Q9NP58 842 aa6.2□□□□□ -1.42
SMCO3-201ENST00000316048 TTF2Q9UNY4 1162 aaKnown RBP6.2□□□□□ -1.42
SMCO3-201ENST00000316048 INPP5FQ9Y2H2 1132 aa6.2□□□□□ -1.42
SMCO3-201ENST00000316048 MAP3K10Q02779 954 aa6.19□□□□□ -1.42
SMCO3-201ENST00000316048 ERMP1Q7Z2K6 904 aa6.19□□□□□ -1.42
SMCO3-201ENST00000316048 NSUN5Q96P11 429 aaKnown RBP6.19□□□□□ -1.42
SMCO3-201ENST00000316048 ZKSCAN3Q9BRR0 538 aa6.19□□□□□ -1.42
SMCO3-201ENST00000316048 KBTBD4Q9NVX7 518 aa6.19□□□□□ -1.42
SMCO3-201ENST00000316048 METTL12A8MUP2 240 aa6.19□□□□□ -1.42
SMCO3-201ENST00000316048 GFRA3O60609 400 aa6.19□□□□□ -1.42
SMCO3-201ENST00000316048 ZNF654Q8IZM8 581 aa6.19□□□□□ -1.42
SMCO3-201ENST00000316048 SRCIN1Q9C0H9 1055 aa6.19□□□□□ -1.42
SMCO3-201ENST00000316048 AAASQ9NRG9 546 aa6.19□□□□□ -1.42
SMCO3-201ENST00000316048 NDFIP2Q9NV92 336 aa6.19□□□□□ -1.42
SMCO3-201ENST00000316048 PCDHGC4Q9Y5F7 938 aa6.19□□□□□ -1.42
SMCO3-201ENST00000316048 SLC35F4A4IF30 521 aa6.18□□□□□ -1.42
SMCO3-201ENST00000316048 PHF20L1A8MW92 1017 aa6.18□□□□□ -1.42
SMCO3-201ENST00000316048 ST13P50502 369 aaKnown RBP6.18□□□□□ -1.42
SMCO3-201ENST00000316048 SPEM2Q0P670 501 aa6.18□□□□□ -1.42
SMCO3-201ENST00000316048 KIAA0319Q5VV43 1072 aa6.18□□□□□ -1.42
SMCO3-201ENST00000316048 CRIPAKQ8N1N5 446 aa6.18□□□□□ -1.42
SMCO3-201ENST00000316048 BHMTQ93088 406 aa6.18□□□□□ -1.42
SMCO3-201ENST00000316048 TCF12Q99081 682 aa6.18□□□□□ -1.42
SMCO3-201ENST00000316048 OXCT2Q9BYC2 517 aaPredicted RBP6.18□□□□□ -1.42
SMCO3-201ENST00000316048 GSTT1P30711 240 aa6.17□□□□□ -1.42
SMCO3-201ENST00000316048 GTF2F1P35269 517 aaKnown RBP eCLIP6.17□□□□□ -1.42
SMCO3-201ENST00000316048 PAK2Q13177 524 aa6.17□□□□□ -1.42
SMCO3-201ENST00000316048 SLC43A3Q8NBI5 491 aa6.17□□□□□ -1.42
SMCO3-201ENST00000316048 DGAT1O75907 488 aa6.17□□□□□ -1.42
SMCO3-201ENST00000316048 EDN3P14138 238 aa6.17□□□□□ -1.42
SMCO3-201ENST00000316048 GRIA4P48058 902 aa6.17□□□□□ -1.42
SMCO3-201ENST00000316048 MLLT1Q03111 559 aaPredicted RBP6.17□□□□□ -1.42
SMCO3-201ENST00000316048 MAP3K11Q16584 847 aa6.17□□□□□ -1.42
SMCO3-201ENST00000316048 FIGNL1Q6PIW4 674 aa6.17□□□□□ -1.42
SMCO3-201ENST00000316048 NCAPG2Q86XI2 1143 aa6.17□□□□□ -1.42
SMCO3-201ENST00000316048 CCDC155Q8N6L0 562 aa6.17□□□□□ -1.42
SMCO3-201ENST00000316048 ZNF837Q96EG3 531 aaPredicted RBP6.17□□□□□ -1.42
SMCO3-201ENST00000316048 PNMA5Q96PV4 448 aa6.17□□□□□ -1.42
SMCO3-201ENST00000316048 LIN7BQ9HAP6 207 aa6.17□□□□□ -1.42
SMCO3-201ENST00000316048 AKAP2Q9Y2D5 859 aa6.17□□□□□ -1.42
SMCO3-201ENST00000316048 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.17□□□□□ -1.42
SMCO3-201ENST00000316048 CCDC85BQ15834 202 aaPredicted RBP6.16□□□□□ -1.42
SMCO3-201ENST00000316048 FAM177A1Q8N128 213 aaPredicted RBP6.16□□□□□ -1.42
SMCO3-201ENST00000316048 PMEPA1Q969W9 287 aa6.16□□□□□ -1.42
SMCO3-201ENST00000316048 OSMRQ99650 979 aa6.16□□□□□ -1.42
SMCO3-201ENST00000316048 GPR25O00155 361 aa6.16□□□□□ -1.42
SMCO3-201ENST00000316048 CELA3AP09093 270 aa6.16□□□□□ -1.42
SMCO3-201ENST00000316048 PRPF40BQ6NWY9 871 aaKnown RBP6.16□□□□□ -1.42
SMCO3-201ENST00000316048 TPTE2Q6XPS3 522 aa6.16□□□□□ -1.42
SMCO3-201ENST00000316048 DPH6Q7L8W6 267 aa6.16□□□□□ -1.42
SMCO3-201ENST00000316048 MCF2L2Q86YR7 1114 aa6.16□□□□□ -1.42
SMCO3-201ENST00000316048 GTPBP3Q969Y2 492 aaKnown RBP6.16□□□□□ -1.42
SMCO3-201ENST00000316048 GMLQ99445 158 aa6.16□□□□□ -1.42
SMCO3-201ENST00000316048 C11orf16Q9NQ32 467 aa6.16□□□□□ -1.42
SMCO3-201ENST00000316048 MARK1Q9P0L2 795 aa6.16□□□□□ -1.42
SMCO3-201ENST00000316048 ADAMTS1Q9UHI8 967 aa6.16□□□□□ -1.42
SMCO3-201ENST00000316048 TMEM238LA0A1B0GVL6 79 aa6.15□□□□□ -1.42
SMCO3-201ENST00000316048 SMARCA5O60264 1052 aaPredicted RBP6.15□□□□□ -1.42
SMCO3-201ENST00000316048 KIF4AO95239 1232 aa6.15□□□□□ -1.42
SMCO3-201ENST00000316048 ATP2B1P20020 1258 aa6.15□□□□□ -1.42
SMCO3-201ENST00000316048 LBRQ14739 615 aaKnown RBP6.15□□□□□ -1.42
SMCO3-201ENST00000316048 SPRED3Q2MJR0 410 aa6.15□□□□□ -1.42
SMCO3-201ENST00000316048 HFE2Q6ZVN8 426 aa6.15□□□□□ -1.42
SMCO3-201ENST00000316048 DHX32Q7L7V1 743 aaKnown RBP6.15□□□□□ -1.42
SMCO3-201ENST00000316048 TLR7Q9NYK1 1049 aaKnown RBP6.15□□□□□ -1.42
SMCO3-201ENST00000316048 MINDY4BA8MYZ0 360 aa6.14□□□□□ -1.43
SMCO3-201ENST00000316048 POTECB2RU33 542 aa6.14□□□□□ -1.43
SMCO3-201ENST00000316048 J3QW42 95 aa6.14□□□□□ -1.43
SMCO3-201ENST00000316048 NRG2O14511 850 aaPredicted RBP6.14□□□□□ -1.43
SMCO3-201ENST00000316048 PSAPP07602 524 aa6.14□□□□□ -1.43
SMCO3-201ENST00000316048 GJA8P48165 433 aa6.14□□□□□ -1.43
SMCO3-201ENST00000316048 ATP11AP98196 1134 aa6.14□□□□□ -1.43
SMCO3-201ENST00000316048 GNL2Q13823 731 aaKnown RBP6.14□□□□□ -1.43
SMCO3-201ENST00000316048 DTHD1Q6ZMT9 781 aa6.14□□□□□ -1.43
SMCO3-201ENST00000316048 CCNJLQ8IV13 435 aa6.14□□□□□ -1.43
SMCO3-201ENST00000316048 TRIM22Q8IYM9 498 aa6.14□□□□□ -1.43
SMCO3-201ENST00000316048 CEP120Q8N960 986 aa6.14□□□□□ -1.43
SMCO3-201ENST00000316048 LNPKQ9C0E8 428 aa6.14□□□□□ -1.43
SMCO3-201ENST00000316048 DZANK1Q9NVP4 752 aa6.14□□□□□ -1.43
SMCO3-201ENST00000316048 TRAK1Q9UPV9 953 aa6.14□□□□□ -1.43
SMCO3-201ENST00000316048 TLR6Q9Y2C9 796 aa6.14□□□□□ -1.43
SMCO3-201ENST00000316048 ZBTB42B2RXF5 422 aa6.14□□□□□ -1.43
SMCO3-201ENST00000316048 FGRP09769 529 aa6.14□□□□□ -1.43
SMCO3-201ENST00000316048 ARID5AQ03989 594 aa6.14□□□□□ -1.43
SMCO3-201ENST00000316048 ADAMTSL4Q6UY14 1074 aa6.14□□□□□ -1.43
SMCO3-201ENST00000316048 IGFLR1Q9H665 355 aa6.14□□□□□ -1.43
SMCO3-201ENST00000316048 NFKBIEO00221 500 aa6.13□□□□□ -1.43
SMCO3-201ENST00000316048 SOX18P35713 384 aa6.13□□□□□ -1.43
SMCO3-201ENST00000316048 CTBSQ01459 385 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms