RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 NECAB1Q8N987 351 aa9.11□□□□□ -0.95
TRIM55-202ENST00000315962 LINC00116Q8NCU8 138 aa9.11□□□□□ -0.95
TRIM55-202ENST00000315962 XAGE2Q96GT9 111 aa9.11□□□□□ -0.95
TRIM55-202ENST00000315962 AOX1Q06278 1338 aa9.11□□□□□ -0.95
TRIM55-202ENST00000315962 RAD50Q92878 1312 aa9.11□□□□□ -0.95
TRIM55-202ENST00000315962 LARGE1O95461 756 aa9.11□□□□□ -0.95
TRIM55-202ENST00000315962 PCCAP05165 728 aaPredicted RBP9.11□□□□□ -0.95
TRIM55-202ENST00000315962 IFIT1P09914 478 aaKnown RBP9.11□□□□□ -0.95
TRIM55-202ENST00000315962 GTF2E1P29083 439 aaPredicted RBP9.11□□□□□ -0.95
TRIM55-202ENST00000315962 AK2P54819 239 aa9.11□□□□□ -0.95
TRIM55-202ENST00000315962 EIF5P55010 431 aaKnown RBP9.11□□□□□ -0.95
TRIM55-202ENST00000315962 STK3Q13188 491 aa9.11□□□□□ -0.95
TRIM55-202ENST00000315962 CHST3Q7LGC8 479 aa9.11□□□□□ -0.95
TRIM55-202ENST00000315962 ZNF830Q96NB3 372 aaPredicted RBP9.11□□□□□ -0.95
TRIM55-202ENST00000315962 TOGARAM1Q9Y4F4 1720 aa9.11□□□□□ -0.95
TRIM55-202ENST00000315962 IL15P40933 162 aaPredicted RBP9.11□□□□□ -0.95
TRIM55-202ENST00000315962 CTSWP56202 376 aa9.11□□□□□ -0.95
TRIM55-202ENST00000315962 C17orf53Q8N3J3 647 aaPredicted RBP9.11□□□□□ -0.95
TRIM55-202ENST00000315962 PARP4Q9UKK3 1724 aaKnown RBP9.1□□□□□ -0.95
TRIM55-202ENST00000315962 ATP5JP18859 108 aa9.1□□□□□ -0.95
TRIM55-202ENST00000315962 IL6STP40189 918 aaPredicted RBP9.1□□□□□ -0.95
TRIM55-202ENST00000315962 C3orf67Q6ZVT6 689 aa9.1□□□□□ -0.95
TRIM55-202ENST00000315962 STK11IPQ8N1F8 1099 aa9.1□□□□□ -0.95
TRIM55-202ENST00000315962 RUFY2Q8WXA3 655 aa9.1□□□□□ -0.95
TRIM55-202ENST00000315962 PAG1Q9NWQ8 432 aa9.1□□□□□ -0.95
TRIM55-202ENST00000315962 COL16A1Q07092 1604 aaPredicted RBP9.1□□□□□ -0.95
TRIM55-202ENST00000315962 GLI3P10071 1580 aa9.1□□□□□ -0.95
TRIM55-202ENST00000315962 COL15A1P39059 1388 aa9.1□□□□□ -0.95
TRIM55-202ENST00000315962 USP42Q9H9J4 1324 aaKnown RBP9.1□□□□□ -0.95
TRIM55-202ENST00000315962 GNPATO15228 680 aa9.1□□□□□ -0.95
TRIM55-202ENST00000315962 NPHP1O15259 732 aa9.1□□□□□ -0.95
TRIM55-202ENST00000315962 ZAP70P43403 619 aa9.1□□□□□ -0.95
TRIM55-202ENST00000315962 WASHC4Q2M389 1173 aa9.1□□□□□ -0.95
TRIM55-202ENST00000315962 PRDM10Q9NQV6 1147 aa9.1□□□□□ -0.95
TRIM55-202ENST00000315962 THRAP3Q9Y2W1 955 aaKnown RBP9.1□□□□□ -0.95
TRIM55-202ENST00000315962 CCDC171Q6TFL3 1326 aa9.09□□□□□ -0.95
TRIM55-202ENST00000315962 HAND2P61296 217 aa9.09□□□□□ -0.95
TRIM55-202ENST00000315962 TTC39AQ5SRH9 613 aa9.09□□□□□ -0.95
TRIM55-202ENST00000315962 CREB3L3Q68CJ9 461 aa9.09□□□□□ -0.95
TRIM55-202ENST00000315962 TTLL5Q6EMB2 1281 aa9.09□□□□□ -0.95
TRIM55-202ENST00000315962 RUFY3Q7L099 469 aa9.09□□□□□ -0.95
TRIM55-202ENST00000315962 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.09□□□□□ -0.95
TRIM55-202ENST00000315962 NAP1L2Q9ULW6 460 aaPredicted RBP9.09□□□□□ -0.95
TRIM55-202ENST00000315962 PHLPP1O60346 1717 aa9.09□□□□□ -0.95
TRIM55-202ENST00000315962 BCL9LQ86UU0 1499 aa9.09□□□□□ -0.95
TRIM55-202ENST00000315962 ABCC6O95255 1503 aa9.09□□□□□ -0.95
TRIM55-202ENST00000315962 ANKRD18BA2A2Z9 1011 aa9.09□□□□□ -0.95
TRIM55-202ENST00000315962 PLCB2Q00722 1185 aa9.09□□□□□ -0.95
TRIM55-202ENST00000315962 CAMTA2O94983 1202 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 USPL1Q5W0Q7 1092 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 CCDC83Q8IWF9 413 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 PPP1R9BQ96SB3 815 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 HAUS7Q99871 368 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 CDCA7Q9BWT1 371 aaPredicted RBP9.08□□□□□ -0.96
TRIM55-202ENST00000315962 BCL11BQ9C0K0 894 aaPredicted RBP9.08□□□□□ -0.96
TRIM55-202ENST00000315962 SHANK3Q9BYB0 1731 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 UQCRHLA0A096LP55 91 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 SLC27A2O14975 620 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 IDH1O75874 414 aaKnown RBP9.08□□□□□ -0.96
TRIM55-202ENST00000315962 PTMAP06454 111 aaKnown RBP9.08□□□□□ -0.96
TRIM55-202ENST00000315962 UQCRHP07919 91 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 ZKSCAN1P17029 563 aaPredicted RBP9.08□□□□□ -0.96
TRIM55-202ENST00000315962 NECTIN1Q15223 517 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 ATP2B3Q16720 1220 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 ERFEQ4G0M1 354 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 BARGINQ6ZT62 677 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 ILDR1Q86SU0 546 aaPredicted RBP9.08□□□□□ -0.96
TRIM55-202ENST00000315962 MPHOSPH8Q99549 860 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 JAG2Q9Y219 1238 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 AFF2P51816 1311 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 GADD45BO75293 160 aaPredicted RBP9.08□□□□□ -0.96
TRIM55-202ENST00000315962 CSF1RP07333 972 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 PHKA1P46020 1223 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 VPS72Q15906 364 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 CCDC158Q5M9N0 1113 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 ZNF34Q8IZ26 560 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 MAP4K1Q92918 833 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 UTP14AQ9BVJ6 771 aaKnown RBP9.08□□□□□ -0.96
TRIM55-202ENST00000315962 PDRG1Q9NUG6 133 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 CCNL1Q9UK58 526 aaPredicted RBP9.08□□□□□ -0.96
TRIM55-202ENST00000315962 RIPOR2Q9Y4F9 1068 aa9.08□□□□□ -0.96
TRIM55-202ENST00000315962 SH3TC1Q8TE82 1336 aa9.07□□□□□ -0.96
TRIM55-202ENST00000315962 PDE8AO60658 829 aa9.07□□□□□ -0.96
TRIM55-202ENST00000315962 FOSBP53539 338 aa9.07□□□□□ -0.96
TRIM55-202ENST00000315962 TRIM28Q13263 835 aaKnown RBP9.07□□□□□ -0.96
TRIM55-202ENST00000315962 TBC1D9BQ66K14 1250 aa9.07□□□□□ -0.96
TRIM55-202ENST00000315962 CERKQ8TCT0 537 aa9.07□□□□□ -0.96
TRIM55-202ENST00000315962 MCAMP43121 646 aa9.07□□□□□ -0.96
TRIM55-202ENST00000315962 RAB11FIP4Q86YS3 637 aa9.07□□□□□ -0.96
TRIM55-202ENST00000315962 SEPT12Q8IYM1 358 aa9.07□□□□□ -0.96
TRIM55-202ENST00000315962 KBTBD3Q8NAB2 608 aa9.07□□□□□ -0.96
TRIM55-202ENST00000315962 OSBP2Q969R2 916 aa9.07□□□□□ -0.96
TRIM55-202ENST00000315962 GJD4Q96KN9 370 aaPredicted RBP9.07□□□□□ -0.96
TRIM55-202ENST00000315962 ARFGEF2Q9Y6D5 1785 aa9.06□□□□□ -0.96
TRIM55-202ENST00000315962 ZNF609O15014 1411 aa9.06□□□□□ -0.96
TRIM55-202ENST00000315962 AHDC1Q5TGY3 1603 aaPredicted RBP9.06□□□□□ -0.96
TRIM55-202ENST00000315962 TCHHQ07283 1943 aa9.06□□□□□ -0.96
TRIM55-202ENST00000315962 OFD1O75665 1012 aa9.06□□□□□ -0.96
TRIM55-202ENST00000315962 CYP21A2P08686 494 aa9.06□□□□□ -0.96
TRIM55-202ENST00000315962 BCAMP50895 628 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms