RNA–Protein interactions for RNA: ENST00000315091.7

TARDBP-202, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-202ENST00000315091 LAMB2P55268 1798 aa15.19■□□□□ 0.02
TARDBP-202ENST00000315091 ZPR1O75312 459 aa15.19■□□□□ 0.02
TARDBP-202ENST00000315091 ERFEQ4G0M1 354 aa15.19■□□□□ 0.02
TARDBP-202ENST00000315091 DDX46Q7L014 1031 aaKnown RBP15.19■□□□□ 0.02
TARDBP-202ENST00000315091 TICAM2Q86XR7 235 aa15.19■□□□□ 0.02
TARDBP-202ENST00000315091 PAG1Q9NWQ8 432 aa15.19■□□□□ 0.02
TARDBP-202ENST00000315091 CCDC171Q6TFL3 1326 aa15.19■□□□□ 0.02
TARDBP-202ENST00000315091 ABCC12Q96J65 1359 aa15.18■□□□□ 0.02
TARDBP-202ENST00000315091 BRWD3Q6RI45 1802 aa15.18■□□□□ 0.02
TARDBP-202ENST00000315091 ST18O60284 1047 aa15.18■□□□□ 0.02
TARDBP-202ENST00000315091 IFIT1P09914 478 aaKnown RBP15.18■□□□□ 0.02
TARDBP-202ENST00000315091 NBR1Q14596 966 aa15.18■□□□□ 0.02
TARDBP-202ENST00000315091 CCDC158Q5M9N0 1113 aa15.18■□□□□ 0.02
TARDBP-202ENST00000315091 SLC10A5Q5PT55 438 aa15.18■□□□□ 0.02
TARDBP-202ENST00000315091 ZNF772Q68DY9 489 aaPredicted RBP15.18■□□□□ 0.02
TARDBP-202ENST00000315091 KCNB2Q92953 911 aa15.18■□□□□ 0.02
TARDBP-202ENST00000315091 MROH5Q6ZUA9 1318 aa15.18■□□□□ 0.02
TARDBP-202ENST00000315091 GOLIM4O00461 696 aa15.17■□□□□ 0.02
TARDBP-202ENST00000315091 FGFR2P21802 821 aa15.17■□□□□ 0.02
TARDBP-202ENST00000315091 RBM6P78332 1123 aaKnown RBP15.17■□□□□ 0.02
TARDBP-202ENST00000315091 SF3B3Q15393 1217 aaKnown RBP15.17■□□□□ 0.02
TARDBP-202ENST00000315091 BICDL1Q6ZP65 573 aa15.17■□□□□ 0.02
TARDBP-202ENST00000315091 C3orf67Q6ZVT6 689 aa15.17■□□□□ 0.02
TARDBP-202ENST00000315091 ZNF589Q86UQ0 364 aaPredicted RBP15.17■□□□□ 0.02
TARDBP-202ENST00000315091 RASEFQ8IZ41 740 aa15.17■□□□□ 0.02
TARDBP-202ENST00000315091 MAP4K1Q92918 833 aa15.17■□□□□ 0.02
TARDBP-202ENST00000315091 SNX14Q9Y5W7 946 aa15.17■□□□□ 0.02
TARDBP-202ENST00000315091 TRIM37O94972 964 aa15.17■□□□□ 0.02
TARDBP-202ENST00000315091 CHGBP05060 677 aa15.17■□□□□ 0.02
TARDBP-202ENST00000315091 NEK4P51957 841 aa15.17■□□□□ 0.02
TARDBP-202ENST00000315091 SLC27A3Q5K4L6 730 aa15.17■□□□□ 0.02
TARDBP-202ENST00000315091 SETDB2Q96T68 719 aa15.17■□□□□ 0.02
TARDBP-202ENST00000315091 SCARF1Q14162 830 aa15.16■□□□□ 0.02
TARDBP-202ENST00000315091 NECTIN1Q15223 517 aa15.16■□□□□ 0.02
TARDBP-202ENST00000315091 TTC39AQ5SRH9 613 aa15.16■□□□□ 0.02
TARDBP-202ENST00000315091 TRAPPC3LQ5T215 181 aa15.16■□□□□ 0.02
TARDBP-202ENST00000315091 GORABQ5T7V8 394 aa15.16■□□□□ 0.02
TARDBP-202ENST00000315091 ZNF512BQ96KM6 892 aaPredicted RBP15.16■□□□□ 0.02
TARDBP-202ENST00000315091 MPHOSPH8Q99549 860 aa15.16■□□□□ 0.02
TARDBP-202ENST00000315091 ADRA2BP18089 450 aa15.15■□□□□ 0.02
TARDBP-202ENST00000315091 PUM3Q15397 648 aaKnown RBP15.15■□□□□ 0.02
TARDBP-202ENST00000315091 NFKBIBQ15653 356 aa15.15■□□□□ 0.02
TARDBP-202ENST00000315091 IL27Q8NEV9 243 aa15.15■□□□□ 0.02
TARDBP-202ENST00000315091 NYXQ9GZU5 481 aa15.15■□□□□ 0.02
TARDBP-202ENST00000315091 COL24A1Q17RW2 1714 aa15.15■□□□□ 0.02
TARDBP-202ENST00000315091 SPEF2Q9C093 1822 aa15.15■□□□□ 0.02
TARDBP-202ENST00000315091 TAF5LO75529 589 aa15.15■□□□□ 0.02
TARDBP-202ENST00000315091 RFC4P35249 363 aa15.15■□□□□ 0.02
TARDBP-202ENST00000315091 HELBQ8NG08 1087 aaPredicted RBP15.15■□□□□ 0.02
TARDBP-202ENST00000315091 LPIN2Q92539 896 aa15.15■□□□□ 0.02
TARDBP-202ENST00000315091 CHMP5Q9NZZ3 219 aa15.15■□□□□ 0.02
TARDBP-202ENST00000315091 RBM8AQ9Y5S9 174 aaKnown RBP15.15■□□□□ 0.02
TARDBP-202ENST00000315091 COL4A1P02462 1669 aa15.15■□□□□ 0.02
TARDBP-202ENST00000315091 C4AP0C0L4 1744 aa15.14■□□□□ 0.01
TARDBP-202ENST00000315091 PHF14O94880 888 aa15.14■□□□□ 0.01
TARDBP-202ENST00000315091 IGHMBP2P38935 993 aaKnown RBP15.14■□□□□ 0.01
TARDBP-202ENST00000315091 MCMDC2Q4G0Z9 681 aa15.14■□□□□ 0.01
TARDBP-202ENST00000315091 UPF3BQ9BZI7 483 aaKnown RBP15.14■□□□□ 0.01
TARDBP-202ENST00000315091 MCAMP43121 646 aa15.13■□□□□ 0.01
TARDBP-202ENST00000315091 FKBP4Q02790 459 aaKnown RBP eCLIP15.13■□□□□ 0.01
TARDBP-202ENST00000315091 ZMYM1Q5SVZ6 1142 aa15.13■□□□□ 0.01
TARDBP-202ENST00000315091 PRPF40BQ6NWY9 871 aaKnown RBP15.13■□□□□ 0.01
TARDBP-202ENST00000315091 NBPF5PQ86XG9 351 aaPredicted RBP15.13■□□□□ 0.01
TARDBP-202ENST00000315091 PROM2Q8N271 834 aa15.13■□□□□ 0.01
TARDBP-202ENST00000315091 SEC62Q99442 399 aaKnown RBP15.13■□□□□ 0.01
TARDBP-202ENST00000315091 CDC5LQ99459 802 aaKnown RBP15.13■□□□□ 0.01
TARDBP-202ENST00000315091 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.13■□□□□ 0.01
TARDBP-202ENST00000315091 GTF2E1P29083 439 aaPredicted RBP15.13■□□□□ 0.01
TARDBP-202ENST00000315091 ARID4AP29374 1257 aaPredicted RBP15.13■□□□□ 0.01
TARDBP-202ENST00000315091 ZAP70P43403 619 aa15.13■□□□□ 0.01
TARDBP-202ENST00000315091 MCM2P49736 904 aa15.13■□□□□ 0.01
TARDBP-202ENST00000315091 SLFNL1Q499Z3 407 aa15.13■□□□□ 0.01
TARDBP-202ENST00000315091 CREB3L3Q68CJ9 461 aa15.13■□□□□ 0.01
TARDBP-202ENST00000315091 CCDC102BQ68D86 513 aa15.13■□□□□ 0.01
TARDBP-202ENST00000315091 PI16Q6UXB8 463 aa15.13■□□□□ 0.01
TARDBP-202ENST00000315091 TPTE2Q6XPS3 522 aa15.13■□□□□ 0.01
TARDBP-202ENST00000315091 HELLSQ9NRZ9 838 aa15.13■□□□□ 0.01
TARDBP-202ENST00000315091 CIZ1Q9ULV3 898 aaPredicted RBP15.13■□□□□ 0.01
TARDBP-202ENST00000315091 EP400Q96L91 3159 aa15.12■□□□□ 0.01
TARDBP-202ENST00000315091 TTC14Q96N46 770 aa15.12■□□□□ 0.01
TARDBP-202ENST00000315091 SNAP23O00161 211 aa15.11■□□□□ 0.01
TARDBP-202ENST00000315091 SLC27A2O14975 620 aa15.11■□□□□ 0.01
TARDBP-202ENST00000315091 RNF113AO15541 343 aaKnown RBP15.11■□□□□ 0.01
TARDBP-202ENST00000315091 HSP90AA1P07900 732 aaKnown RBP15.11■□□□□ 0.01
TARDBP-202ENST00000315091 SLC5A1P13866 664 aa15.11■□□□□ 0.01
TARDBP-202ENST00000315091 SSFA2P28290 1259 aa15.11■□□□□ 0.01
TARDBP-202ENST00000315091 PHKA1P46020 1223 aa15.11■□□□□ 0.01
TARDBP-202ENST00000315091 CHRNDQ07001 517 aa15.11■□□□□ 0.01
TARDBP-202ENST00000315091 NFIXQ14938 502 aa15.11■□□□□ 0.01
TARDBP-202ENST00000315091 CCDC129Q6ZRS4 1044 aa15.11■□□□□ 0.01
TARDBP-202ENST00000315091 ANKRD18AQ8IVF6 992 aa15.11■□□□□ 0.01
TARDBP-202ENST00000315091 TM6SF1Q9BZW5 370 aa15.11■□□□□ 0.01
TARDBP-202ENST00000315091 FOXD4L1Q9NU39 408 aa15.11■□□□□ 0.01
TARDBP-202ENST00000315091 UBR3Q6ZT12 1888 aa15.11■□□□□ 0.01
TARDBP-202ENST00000315091 TXNRD1Q16881 649 aa15.1■□□□□ 0.01
TARDBP-202ENST00000315091 ADCK5Q3MIX3 580 aa15.1■□□□□ 0.01
TARDBP-202ENST00000315091 TMX3Q96JJ7 454 aa15.1■□□□□ 0.01
TARDBP-202ENST00000315091 BSDC1Q9NW68 430 aaPredicted RBP15.1■□□□□ 0.01
TARDBP-202ENST00000315091 CARMIL3Q8ND23 1372 aa15.1■□□□□ 0.01
TARDBP-202ENST00000315091 ARAP2Q8WZ64 1704 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms