RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 FLT3P36888 993 aa10.68□□□□□ -0.7
BDNF-201ENST00000314915 PICK1Q9NRD5 415 aa10.68□□□□□ -0.7
BDNF-201ENST00000314915 PTPN23Q9H3S7 1636 aa10.68□□□□□ -0.7
BDNF-201ENST00000314915 AQRO60306 1485 aaKnown RBP eCLIP10.67□□□□□ -0.7
BDNF-201ENST00000314915 ZNF75DP51815 510 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 DHX8Q14562 1220 aaKnown RBP10.67□□□□□ -0.7
BDNF-201ENST00000314915 CEP57Q86XR8 500 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 LRRC8AQ8IWT6 810 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 RBM42Q9BTD8 480 aaKnown RBP10.67□□□□□ -0.7
BDNF-201ENST00000314915 FUCA2Q9BTY2 467 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 ATP8A1Q9Y2Q0 1164 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 SHROOM2Q13796 1616 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 MPP3Q13368 585 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 LONRF2Q1L5Z9 754 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 CCDC57Q2TAC2 916 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 B4GALNT4Q76KP1 1039 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 KCTD17Q8N5Z5 321 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 TMEM87AQ8NBN3 555 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 BHMTQ93088 406 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 SCLT1Q96NL6 688 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 TMEM98Q9Y2Y6 226 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 KIF3BO15066 747 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 ATP6V1G1O75348 118 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 LRRFIP1Q32MZ4 808 aaKnown RBP10.67□□□□□ -0.7
BDNF-201ENST00000314915 ZFAND2BQ8WV99 257 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 RBM41Q96IZ5 413 aaKnown RBP10.67□□□□□ -0.7
BDNF-201ENST00000314915 SMTNP53814 917 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 PLCB4Q15147 1175 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 SNCBQ16143 134 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 CCDC38Q502W7 563 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 THEMIS2Q5TEJ8 643 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 XAGE2Q96GT9 111 aa10.67□□□□□ -0.7
BDNF-201ENST00000314915 CLASP1Q7Z460 1538 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 TTC41PQ6P2S7 1318 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 CEP104O60308 925 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 XBP1P17861 261 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 CYP11B2P19099 503 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 YY1P25490 414 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 EVCP57679 992 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 CCDC92Q53HC0 331 aaPredicted RBP10.66□□□□□ -0.7
BDNF-201ENST00000314915 SYNE3Q6ZMZ3 975 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 SEPT14Q6ZU15 432 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 PHACTR1Q9C0D0 580 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 BICC1Q9H694 974 aaKnown RBP10.66□□□□□ -0.7
BDNF-201ENST00000314915 FAN1Q9Y2M0 1017 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 CARMIL1Q5VZK9 1371 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 KRT38O76015 456 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 PLA2G4DQ86XP0 818 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 TRIM58Q8NG06 486 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 NACA2Q9H009 215 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 PDE11AQ9HCR9 933 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 WDR37Q9Y2I8 494 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 TESPA1A2RU30 521 aaPredicted RBP10.66□□□□□ -0.7
BDNF-201ENST00000314915 POTEB2H3BUK9 544 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 VDRP11473 427 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 UBE2HP62256 183 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 CUL3Q13618 768 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 KBTBD12Q3ZCT8 623 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 GBP3Q9H0R5 595 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 PCDHGC5Q9Y5F6 944 aa10.66□□□□□ -0.7
BDNF-201ENST00000314915 TTLL7Q6ZT98 887 aa10.65□□□□□ -0.7
BDNF-201ENST00000314915 PARP9Q8IXQ6 854 aa10.65□□□□□ -0.7
BDNF-201ENST00000314915 HNRNPLLQ8WVV9 542 aaKnown RBP10.65□□□□□ -0.7
BDNF-201ENST00000314915 FAM163AQ96GL9 167 aaPredicted RBP10.65□□□□□ -0.7
BDNF-201ENST00000314915 PAPOLBQ9NRJ5 636 aaKnown RBP10.65□□□□□ -0.7
BDNF-201ENST00000314915 CORO1CQ9ULV4 474 aaPredicted RBP10.65□□□□□ -0.7
BDNF-201ENST00000314915 PHLPP2Q6ZVD8 1323 aa10.65□□□□□ -0.7
BDNF-201ENST00000314915 CAVIN2O95810 425 aa10.65□□□□□ -0.7
BDNF-201ENST00000314915 ATP2B2Q01814 1243 aa10.65□□□□□ -0.7
BDNF-201ENST00000314915 GBP7Q8N8V2 638 aaPredicted RBP10.65□□□□□ -0.7
BDNF-201ENST00000314915 RABGGTAQ92696 567 aa10.65□□□□□ -0.7
BDNF-201ENST00000314915 SWAP70Q9UH65 585 aa10.65□□□□□ -0.7
BDNF-201ENST00000314915 MTMR7Q9Y216 660 aa10.65□□□□□ -0.7
BDNF-201ENST00000314915 ST20-MTHFSA0A0A6YYL1 179 aa10.65□□□□□ -0.7
BDNF-201ENST00000314915 ZNF189O75820 626 aaPredicted RBP10.65□□□□□ -0.7
BDNF-201ENST00000314915 HARSP12081 509 aaKnown RBP10.65□□□□□ -0.7
BDNF-201ENST00000314915 GORABQ5T7V8 394 aa10.65□□□□□ -0.7
BDNF-201ENST00000314915 MTHFD1LQ6UB35 978 aa10.65□□□□□ -0.7
BDNF-201ENST00000314915 USP48Q86UV5 1035 aa10.65□□□□□ -0.7
BDNF-201ENST00000314915 CCDC150Q8NCX0 1101 aa10.65□□□□□ -0.7
BDNF-201ENST00000314915 AFAP1L1Q8TED9 768 aa10.65□□□□□ -0.7
BDNF-201ENST00000314915 JAKMIP2Q96AA8 810 aa10.65□□□□□ -0.7
BDNF-201ENST00000314915 DNAAF2Q9NVR5 837 aaKnown RBP10.65□□□□□ -0.7
BDNF-201ENST00000314915 ANKIB1Q9P2G1 1089 aa10.65□□□□□ -0.7
BDNF-201ENST00000314915 DDX20Q9UHI6 824 aaKnown RBP10.65□□□□□ -0.7
BDNF-201ENST00000314915 FHOD3Q2V2M9 1422 aa10.65□□□□□ -0.71
BDNF-201ENST00000314915 FNTAP49354 379 aa10.65□□□□□ -0.71
BDNF-201ENST00000314915 KIAA0753Q2KHM9 967 aa10.65□□□□□ -0.71
BDNF-201ENST00000314915 SLC4A8Q2Y0W8 1093 aa10.65□□□□□ -0.71
BDNF-201ENST00000314915 CUL5Q93034 780 aa10.65□□□□□ -0.71
BDNF-201ENST00000314915 PARD6BQ9BYG5 372 aa10.65□□□□□ -0.71
BDNF-201ENST00000314915 LIN7AO14910 233 aaPredicted RBP10.64□□□□□ -0.71
BDNF-201ENST00000314915 APLFQ8IW19 511 aaPredicted RBP10.64□□□□□ -0.71
BDNF-201ENST00000314915 CACTIN-AS1Q8N1I8 211 aa10.64□□□□□ -0.71
BDNF-201ENST00000314915 STAG2Q8N3U4 1231 aa10.64□□□□□ -0.71
BDNF-201ENST00000314915 AFAP1Q8N556 730 aa10.64□□□□□ -0.71
BDNF-201ENST00000314915 CCDC47Q96A33 483 aaKnown RBP10.64□□□□□ -0.71
BDNF-201ENST00000314915 DHRS1Q96LJ7 313 aa10.64□□□□□ -0.71
BDNF-201ENST00000314915 GORASP1Q9BQQ3 440 aa10.64□□□□□ -0.71
BDNF-201ENST00000314915 ATP10AO60312 1499 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms