RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 LY75O60449 1722 aa20.21■□□□□ 0.83
CLCF1-201ENST00000312438 RFX7Q2KHR2 1363 aa20.21■□□□□ 0.83
CLCF1-201ENST00000312438 RXRBP28702 533 aa20.2■□□□□ 0.82
CLCF1-201ENST00000312438 TTC39AQ5SRH9 613 aa20.2■□□□□ 0.82
CLCF1-201ENST00000312438 KBTBD3Q8NAB2 608 aa20.2■□□□□ 0.82
CLCF1-201ENST00000312438 FAM227BQ96M60 508 aa20.2■□□□□ 0.82
CLCF1-201ENST00000312438 PAG1Q9NWQ8 432 aa20.2■□□□□ 0.82
CLCF1-201ENST00000312438 K7ELQ4 463 aaPredicted RBP20.2■□□□□ 0.82
CLCF1-201ENST00000312438 ST18O60284 1047 aa20.2■□□□□ 0.82
CLCF1-201ENST00000312438 PHF14O94880 888 aa20.2■□□□□ 0.82
CLCF1-201ENST00000312438 NBPF5PQ86XG9 351 aaPredicted RBP20.2■□□□□ 0.82
CLCF1-201ENST00000312438 CDC5LQ99459 802 aaKnown RBP20.2■□□□□ 0.82
CLCF1-201ENST00000312438 ADORA1P30542 326 aa20.19■□□□□ 0.82
CLCF1-201ENST00000312438 RIC1Q4ADV7 1423 aa20.19■□□□□ 0.82
CLCF1-201ENST00000312438 NDUFB9Q9Y6M9 179 aa20.19■□□□□ 0.82
CLCF1-201ENST00000312438 BCORQ6W2J9 1755 aa20.19■□□□□ 0.82
CLCF1-201ENST00000312438 CD2BP2O95400 341 aaKnown RBP20.18■□□□□ 0.82
CLCF1-201ENST00000312438 PUM3Q15397 648 aaKnown RBP20.18■□□□□ 0.82
CLCF1-201ENST00000312438 DDX46Q7L014 1031 aaKnown RBP20.18■□□□□ 0.82
CLCF1-201ENST00000312438 LPIN2Q92539 896 aa20.18■□□□□ 0.82
CLCF1-201ENST00000312438 GOLIM4O00461 696 aa20.18■□□□□ 0.82
CLCF1-201ENST00000312438 ZNF512BQ96KM6 892 aaPredicted RBP20.18■□□□□ 0.82
CLCF1-201ENST00000312438 PALD1Q9ULE6 856 aa20.18■□□□□ 0.82
CLCF1-201ENST00000312438 ABCC12Q96J65 1359 aa20.17■□□□□ 0.82
CLCF1-201ENST00000312438 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.17■□□□□ 0.82
CLCF1-201ENST00000312438 A0A0D9SFI3 127 aa20.17■□□□□ 0.82
CLCF1-201ENST00000312438 NLRP3Q96P20 1036 aa20.17■□□□□ 0.82
CLCF1-201ENST00000312438 SLKQ9H2G2 1235 aaPredicted RBP20.17■□□□□ 0.82
CLCF1-201ENST00000312438 ANTXR1Q9H6X2 564 aa20.17■□□□□ 0.82
CLCF1-201ENST00000312438 C4BP0C0L5 1744 aa20.16■□□□□ 0.82
CLCF1-201ENST00000312438 FGFR2P21802 821 aa20.16■□□□□ 0.82
CLCF1-201ENST00000312438 PTH1RQ03431 593 aa20.16■□□□□ 0.82
CLCF1-201ENST00000312438 TXNRD1Q16881 649 aa20.16■□□□□ 0.82
CLCF1-201ENST00000312438 PLSCR1O15162 318 aa20.16■□□□□ 0.82
CLCF1-201ENST00000312438 SSFA2P28290 1259 aa20.16■□□□□ 0.82
CLCF1-201ENST00000312438 FKBP4Q02790 459 aaKnown RBP eCLIP20.16■□□□□ 0.82
CLCF1-201ENST00000312438 LRRFIP1Q32MZ4 808 aaKnown RBP20.16■□□□□ 0.82
CLCF1-201ENST00000312438 ANKRD18AQ8IVF6 992 aa20.16■□□□□ 0.82
CLCF1-201ENST00000312438 SPRYD3Q8NCJ5 442 aa20.16■□□□□ 0.82
CLCF1-201ENST00000312438 MAP4K1Q92918 833 aa20.16■□□□□ 0.82
CLCF1-201ENST00000312438 CCDC171Q6TFL3 1326 aa20.15■□□□□ 0.82
CLCF1-201ENST00000312438 NEK4P51957 841 aa20.15■□□□□ 0.82
CLCF1-201ENST00000312438 PROM2Q8N271 834 aa20.15■□□□□ 0.82
CLCF1-201ENST00000312438 HELBQ8NG08 1087 aaPredicted RBP20.15■□□□□ 0.82
CLCF1-201ENST00000312438 SCN7AQ01118 1682 aa20.14■□□□□ 0.82
CLCF1-201ENST00000312438 SLC5A1P13866 664 aa20.14■□□□□ 0.81
CLCF1-201ENST00000312438 MCMDC2Q4G0Z9 681 aa20.14■□□□□ 0.81
CLCF1-201ENST00000312438 C3orf67Q6ZVT6 689 aa20.14■□□□□ 0.81
CLCF1-201ENST00000312438 MYH3P11055 1940 aa20.14■□□□□ 0.81
CLCF1-201ENST00000312438 MCM2P49736 904 aa20.13■□□□□ 0.81
CLCF1-201ENST00000312438 NECTIN1Q15223 517 aa20.13■□□□□ 0.81
CLCF1-201ENST00000312438 KCNB2Q92953 911 aa20.13■□□□□ 0.81
CLCF1-201ENST00000312438 HELLSQ9NRZ9 838 aa20.13■□□□□ 0.81
CLCF1-201ENST00000312438 BSDC1Q9NW68 430 aaPredicted RBP20.13■□□□□ 0.81
CLCF1-201ENST00000312438 MED23Q9ULK4 1368 aa20.13■□□□□ 0.81
CLCF1-201ENST00000312438 AK9Q5TCS8 1911 aa20.13■□□□□ 0.81
CLCF1-201ENST00000312438 UQCRFS1P1P0C7P4 283 aa20.13■□□□□ 0.81
CLCF1-201ENST00000312438 NFIXQ14938 502 aa20.13■□□□□ 0.81
CLCF1-201ENST00000312438 SNX14Q9Y5W7 946 aa20.13■□□□□ 0.81
CLCF1-201ENST00000312438 TAF5LO75529 589 aa20.12■□□□□ 0.81
CLCF1-201ENST00000312438 HSP90AA1P07900 732 aaKnown RBP20.12■□□□□ 0.81
CLCF1-201ENST00000312438 CHRNDQ07001 517 aa20.12■□□□□ 0.81
CLCF1-201ENST00000312438 CCDC102BQ68D86 513 aa20.12■□□□□ 0.81
CLCF1-201ENST00000312438 TAF1LQ8IZX4 1826 aa20.12■□□□□ 0.81
CLCF1-201ENST00000312438 LRP5O75197 1615 aa20.12■□□□□ 0.81
CLCF1-201ENST00000312438 CARMIL3Q8ND23 1372 aa20.11■□□□□ 0.81
CLCF1-201ENST00000312438 BRWD3Q6RI45 1802 aa20.11■□□□□ 0.81
CLCF1-201ENST00000312438 NPHP1O15259 732 aa20.11■□□□□ 0.81
CLCF1-201ENST00000312438 RNF113AO15541 343 aaKnown RBP20.11■□□□□ 0.81
CLCF1-201ENST00000312438 APBA3O96018 575 aa20.11■□□□□ 0.81
CLCF1-201ENST00000312438 KCNJ4P48050 445 aa20.11■□□□□ 0.81
CLCF1-201ENST00000312438 ZNF589Q86UQ0 364 aaPredicted RBP20.11■□□□□ 0.81
CLCF1-201ENST00000312438 RBM8AQ9Y5S9 174 aaKnown RBP20.11■□□□□ 0.81
CLCF1-201ENST00000312438 DDX60Q8IY21 1712 aaKnown RBP20.11■□□□□ 0.81
CLCF1-201ENST00000312438 ZFYP08048 801 aaPredicted RBP20.11■□□□□ 0.81
CLCF1-201ENST00000312438 GYS1P13807 737 aa20.11■□□□□ 0.81
CLCF1-201ENST00000312438 ZKSCAN1P17029 563 aaPredicted RBP20.11■□□□□ 0.81
CLCF1-201ENST00000312438 ZAP70P43403 619 aa20.11■□□□□ 0.81
CLCF1-201ENST00000312438 SCARF1Q14162 830 aa20.11■□□□□ 0.81
CLCF1-201ENST00000312438 PRPF40BQ6NWY9 871 aaKnown RBP20.11■□□□□ 0.81
CLCF1-201ENST00000312438 RASEFQ8IZ41 740 aa20.11■□□□□ 0.81
CLCF1-201ENST00000312438 ARID4AP29374 1257 aaPredicted RBP20.1■□□□□ 0.81
CLCF1-201ENST00000312438 MCAMP43121 646 aa20.1■□□□□ 0.81
CLCF1-201ENST00000312438 TTF1Q15361 905 aaPredicted RBP20.1■□□□□ 0.81
CLCF1-201ENST00000312438 ZMYM1Q5SVZ6 1142 aa20.1■□□□□ 0.81
CLCF1-201ENST00000312438 CHMP5Q9NZZ3 219 aa20.1■□□□□ 0.81
CLCF1-201ENST00000312438 RPS8P62241 208 aaKnown RBP20.09■□□□□ 0.81
CLCF1-201ENST00000312438 RNF20Q5VTR2 975 aa20.09■□□□□ 0.81
CLCF1-201ENST00000312438 PHKA1P46020 1223 aa20.09■□□□□ 0.81
CLCF1-201ENST00000312438 SEC62Q99442 399 aaKnown RBP20.09■□□□□ 0.81
CLCF1-201ENST00000312438 CHGBP05060 677 aa20.08■□□□□ 0.8
CLCF1-201ENST00000312438 CREB3L3Q68CJ9 461 aa20.08■□□□□ 0.8
CLCF1-201ENST00000312438 CNBD1Q8NA66 436 aa20.08■□□□□ 0.8
CLCF1-201ENST00000312438 CELF1Q92879 486 aaKnown RBP20.08■□□□□ 0.8
CLCF1-201ENST00000312438 TM6SF1Q9BZW5 370 aa20.08■□□□□ 0.8
CLCF1-201ENST00000312438 RGS17Q9UGC6 210 aaPredicted RBP20.08■□□□□ 0.8
CLCF1-201ENST00000312438 MINPP1Q9UNW1 487 aa20.08■□□□□ 0.8
CLCF1-201ENST00000312438 LAMB2P55268 1798 aa20.08■□□□□ 0.8
CLCF1-201ENST00000312438 TM4SF1P30408 202 aa20.07■□□□□ 0.8
CLCF1-201ENST00000312438 DDIT3P35638 169 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms