RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 USP16Q9Y5T5 823 aa7.09□□□□□ -1.27
SEC22A-201ENST00000309934 XBP1P17861 261 aa7.09□□□□□ -1.27
SEC22A-201ENST00000309934 RBM6P78332 1123 aaKnown RBP7.09□□□□□ -1.27
SEC22A-201ENST00000309934 AKAP17AQ02040 695 aaKnown RBP7.09□□□□□ -1.27
SEC22A-201ENST00000309934 TNNI3KQ59H18 835 aa7.09□□□□□ -1.27
SEC22A-201ENST00000309934 NUTM1Q86Y26 1132 aa7.09□□□□□ -1.27
SEC22A-201ENST00000309934 SUCLG2Q96I99 432 aa7.09□□□□□ -1.27
SEC22A-201ENST00000309934 GJD4Q96KN9 370 aaPredicted RBP7.09□□□□□ -1.27
SEC22A-201ENST00000309934 FPGT-TNNI3KV9GXZ4 949 aa7.09□□□□□ -1.27
SEC22A-201ENST00000309934 KDM6AO15550 1401 aaPredicted RBP7.09□□□□□ -1.27
SEC22A-201ENST00000309934 LRP6O75581 1613 aa7.09□□□□□ -1.27
SEC22A-201ENST00000309934 CAMTA1Q9Y6Y1 1673 aa7.09□□□□□ -1.27
SEC22A-201ENST00000309934 KCNQ3O43525 872 aa7.09□□□□□ -1.28
SEC22A-201ENST00000309934 CTSWP56202 376 aa7.09□□□□□ -1.28
SEC22A-201ENST00000309934 CWF19L2Q2TBE0 894 aaKnown RBP7.09□□□□□ -1.28
SEC22A-201ENST00000309934 NBPF14Q5TI25 921 aa7.09□□□□□ -1.28
SEC22A-201ENST00000309934 GOLGA6L1Q8N7Z2 621 aa7.09□□□□□ -1.28
SEC22A-201ENST00000309934 WASF1Q92558 559 aa7.09□□□□□ -1.28
SEC22A-201ENST00000309934 ISCA1Q9BUE6 129 aa7.09□□□□□ -1.28
SEC22A-201ENST00000309934 USP42Q9H9J4 1324 aaKnown RBP7.09□□□□□ -1.28
SEC22A-201ENST00000309934 RPS6KA4O75676 772 aa7.08□□□□□ -1.28
SEC22A-201ENST00000309934 GNL2Q13823 731 aaKnown RBP7.08□□□□□ -1.28
SEC22A-201ENST00000309934 TRIM29Q14134 588 aa7.08□□□□□ -1.28
SEC22A-201ENST00000309934 LPIN2Q92539 896 aa7.08□□□□□ -1.28
SEC22A-201ENST00000309934 GZF1Q9H116 711 aaPredicted RBP7.08□□□□□ -1.28
SEC22A-201ENST00000309934 A1BGP04217 495 aa7.08□□□□□ -1.28
SEC22A-201ENST00000309934 SSFA2P28290 1259 aa7.08□□□□□ -1.28
SEC22A-201ENST00000309934 MCMDC2Q4G0Z9 681 aa7.08□□□□□ -1.28
SEC22A-201ENST00000309934 FNBP4Q8N3X1 1017 aaPredicted RBP7.08□□□□□ -1.28
SEC22A-201ENST00000309934 CARMIL3Q8ND23 1372 aa7.08□□□□□ -1.28
SEC22A-201ENST00000309934 WDR33Q9C0J8 1336 aaKnown RBP7.08□□□□□ -1.28
SEC22A-201ENST00000309934 QTRT2Q9H974 415 aaKnown RBP7.08□□□□□ -1.28
SEC22A-201ENST00000309934 DENND2AQ9ULE3 1009 aa7.08□□□□□ -1.28
SEC22A-201ENST00000309934 TNNQ9UQP3 1299 aa7.08□□□□□ -1.28
SEC22A-201ENST00000309934 RPAP1Q9BWH6 1393 aaPredicted RBP7.08□□□□□ -1.28
SEC22A-201ENST00000309934 GOLIM4O00461 696 aa7.08□□□□□ -1.28
SEC22A-201ENST00000309934 LETM1O95202 739 aaPredicted RBP7.08□□□□□ -1.28
SEC22A-201ENST00000309934 ANXA1P04083 346 aa7.08□□□□□ -1.28
SEC22A-201ENST00000309934 PLCG2P16885 1265 aa7.08□□□□□ -1.28
SEC22A-201ENST00000309934 CRKLP46109 303 aaKnown RBP7.08□□□□□ -1.28
SEC22A-201ENST00000309934 EYA3Q99504 573 aa7.08□□□□□ -1.28
SEC22A-201ENST00000309934 CNNM2Q9H8M5 875 aa7.08□□□□□ -1.28
SEC22A-201ENST00000309934 ROBO1Q9Y6N7 1651 aa7.08□□□□□ -1.28
SEC22A-201ENST00000309934 ADCY9O60503 1353 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 MBD3O95983 291 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 CYP19A1P11511 503 aaPredicted RBP7.07□□□□□ -1.28
SEC22A-201ENST00000309934 NEK4P51957 841 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 RABL6Q3YEC7 729 aaPredicted RBP7.07□□□□□ -1.28
SEC22A-201ENST00000309934 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.07□□□□□ -1.28
SEC22A-201ENST00000309934 KRT27Q7Z3Y8 459 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 ZNF804AQ7Z570 1209 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 ACSBG1Q96GR2 724 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 AFF2P51816 1311 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 CPLX1O14810 134 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 NBPF7P0C2Y1 421 aaPredicted RBP7.07□□□□□ -1.28
SEC22A-201ENST00000309934 HMGN5P82970 282 aaKnown RBP7.07□□□□□ -1.28
SEC22A-201ENST00000309934 SMAP1Q8IYB5 467 aaPredicted RBP7.07□□□□□ -1.28
SEC22A-201ENST00000309934 TMTC2Q8N394 836 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 AIDAQ96BJ3 306 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 TM6SF1Q9BZW5 370 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 STK32BQ9NY57 414 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 BCL9O00512 1426 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 CCDC196A0A1B0GTZ2 297 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 H3BQV1 296 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 SMARCA5O60264 1052 aaPredicted RBP7.07□□□□□ -1.28
SEC22A-201ENST00000309934 BAG3O95817 575 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 CHMLP26374 656 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 RXRBP28702 533 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 IFFO2Q5TF58 517 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 NLGN1Q8N2Q7 840 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 SUPT20HQ8NEM7 779 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 PDRG1Q9NUG6 133 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 PAG1Q9NWQ8 432 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 COL22A1Q8NFW1 1626 aaPredicted RBP7.07□□□□□ -1.28
SEC22A-201ENST00000309934 MAST3O60307 1309 aa7.07□□□□□ -1.28
SEC22A-201ENST00000309934 GNPATO15228 680 aa7.06□□□□□ -1.28
SEC22A-201ENST00000309934 RNF113AO15541 343 aaKnown RBP7.06□□□□□ -1.28
SEC22A-201ENST00000309934 GPTP24298 496 aa7.06□□□□□ -1.28
SEC22A-201ENST00000309934 INTS4Q96HW7 963 aaKnown RBP7.06□□□□□ -1.28
SEC22A-201ENST00000309934 TRIM34Q9BYJ4 488 aa7.06□□□□□ -1.28
SEC22A-201ENST00000309934 SAFBQ15424 915 aaKnown RBP eCLIP7.06□□□□□ -1.28
SEC22A-201ENST00000309934 CNBD1Q8NA66 436 aa7.06□□□□□ -1.28
SEC22A-201ENST00000309934 BRMS1Q9HCU9 246 aa7.06□□□□□ -1.28
SEC22A-201ENST00000309934 LRP2BPQ9P2M1 347 aa7.06□□□□□ -1.28
SEC22A-201ENST00000309934 PARP3Q9Y6F1 533 aa7.06□□□□□ -1.28
SEC22A-201ENST00000309934 PCP11498 1178 aaKnown RBP7.06□□□□□ -1.28
SEC22A-201ENST00000309934 ITGA6P23229 1130 aa7.06□□□□□ -1.28
SEC22A-201ENST00000309934 CHAF1AQ13111 956 aaPredicted RBP7.06□□□□□ -1.28
SEC22A-201ENST00000309934 NARFQ9UHQ1 456 aa7.06□□□□□ -1.28
SEC22A-201ENST00000309934 ASAP1Q9ULH1 1129 aa7.06□□□□□ -1.28
SEC22A-201ENST00000309934 LIMCH1Q9UPQ0 1083 aa7.06□□□□□ -1.28
SEC22A-201ENST00000309934 STRCQ7RTU9 1775 aa7.06□□□□□ -1.28
SEC22A-201ENST00000309934 ALDH1B1P30837 517 aa7.06□□□□□ -1.28
SEC22A-201ENST00000309934 FKBP4Q02790 459 aaKnown RBP eCLIP7.06□□□□□ -1.28
SEC22A-201ENST00000309934 UBE4AQ14139 1066 aa7.06□□□□□ -1.28
SEC22A-201ENST00000309934 CWC27Q6UX04 472 aaKnown RBP7.06□□□□□ -1.28
SEC22A-201ENST00000309934 NLRP10Q86W26 655 aa7.06□□□□□ -1.28
SEC22A-201ENST00000309934 KRT23Q9C075 422 aa7.06□□□□□ -1.28
SEC22A-201ENST00000309934 CCDC8Q9H0W5 538 aaPredicted RBP7.06□□□□□ -1.28
SEC22A-201ENST00000309934 BOLA2Q9H3K6 86 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms