RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 ZNF609O15014 1411 aa27.49■■□□□ 1.99
IRF3-201ENST00000309877 ANKRD18AQ8IVF6 992 aa27.49■■□□□ 1.99
IRF3-201ENST00000309877 ANO8Q9HCE9 1232 aaPredicted RBP27.49■■□□□ 1.99
IRF3-201ENST00000309877 RIC1Q4ADV7 1423 aa27.49■■□□□ 1.99
IRF3-201ENST00000309877 EIF5BO60841 1220 aaKnown RBP27.49■■□□□ 1.99
IRF3-201ENST00000309877 MFAP1P55081 439 aaKnown RBP27.49■■□□□ 1.99
IRF3-201ENST00000309877 DDR1Q08345 913 aa27.48■■□□□ 1.99
IRF3-201ENST00000309877 LRP5O75197 1615 aa27.47■■□□□ 1.99
IRF3-201ENST00000309877 POLRMTO00411 1230 aaKnown RBP27.47■■□□□ 1.99
IRF3-201ENST00000309877 ATP5JP18859 108 aa27.47■■□□□ 1.99
IRF3-201ENST00000309877 TUBGCP6Q96RT7 1819 aa27.47■■□□□ 1.99
IRF3-201ENST00000309877 PDE8BO95263 885 aa27.46■■□□□ 1.99
IRF3-201ENST00000309877 ATP2B3Q16720 1220 aa27.46■■□□□ 1.99
IRF3-201ENST00000309877 CCDC125Q86Z20 511 aa27.46■■□□□ 1.99
IRF3-201ENST00000309877 BOLA2Q9H3K6 86 aa27.46■■□□□ 1.99
IRF3-201ENST00000309877 GORABQ5T7V8 394 aa27.46■■□□□ 1.99
IRF3-201ENST00000309877 DDX46Q7L014 1031 aaKnown RBP27.46■■□□□ 1.99
IRF3-201ENST00000309877 VGLL2Q8N8G2 317 aa27.46■■□□□ 1.99
IRF3-201ENST00000309877 XAGE2Q96GT9 111 aa27.44■■□□□ 1.98
IRF3-201ENST00000309877 ANP32AP39687 249 aaKnown RBP27.43■■□□□ 1.98
IRF3-201ENST00000309877 HELBQ8NG08 1087 aaPredicted RBP27.43■■□□□ 1.98
IRF3-201ENST00000309877 EVI5LQ96CN4 794 aa27.43■■□□□ 1.98
IRF3-201ENST00000309877 BSDC1Q9NW68 430 aaPredicted RBP27.43■■□□□ 1.98
IRF3-201ENST00000309877 PUM3Q15397 648 aaKnown RBP27.43■■□□□ 1.98
IRF3-201ENST00000309877 CCDC158Q5M9N0 1113 aa27.43■■□□□ 1.98
IRF3-201ENST00000309877 RPS8P62241 208 aaKnown RBP27.42■■□□□ 1.98
IRF3-201ENST00000309877 CELF1Q92879 486 aaKnown RBP27.42■■□□□ 1.98
IRF3-201ENST00000309877 CHMLP26374 656 aa27.41■■□□□ 1.98
IRF3-201ENST00000309877 PARP3Q9Y6F1 533 aa27.41■■□□□ 1.98
IRF3-201ENST00000309877 ADORA1P30542 326 aa27.4■■□□□ 1.98
IRF3-201ENST00000309877 CHRNDQ07001 517 aa27.4■■□□□ 1.98
IRF3-201ENST00000309877 MSL1Q68DK7 614 aa27.4■■□□□ 1.98
IRF3-201ENST00000309877 LPIN2Q92539 896 aa27.4■■□□□ 1.98
IRF3-201ENST00000309877 TAF5LO75529 589 aa27.4■■□□□ 1.98
IRF3-201ENST00000309877 MMP10P09238 476 aa27.4■■□□□ 1.98
IRF3-201ENST00000309877 TTC39AQ5SRH9 613 aa27.4■■□□□ 1.98
IRF3-201ENST00000309877 RPGRQ92834 1020 aaKnown RBP27.4■■□□□ 1.98
IRF3-201ENST00000309877 TNRC6CQ9HCJ0 1690 aaKnown RBP27.39■■□□□ 1.98
IRF3-201ENST00000309877 HAUS7Q99871 368 aa27.39■■□□□ 1.97
IRF3-201ENST00000309877 SLC5A1P13866 664 aa27.38■■□□□ 1.97
IRF3-201ENST00000309877 DNAJC2Q99543 621 aaKnown RBP27.38■■□□□ 1.97
IRF3-201ENST00000309877 CASZ1Q86V15 1759 aa27.38■■□□□ 1.97
IRF3-201ENST00000309877 IFIT1P09914 478 aaKnown RBP27.37■■□□□ 1.97
IRF3-201ENST00000309877 FGFR2P21802 821 aa27.37■■□□□ 1.97
IRF3-201ENST00000309877 TBC1D32Q96NH3 1257 aa27.37■■□□□ 1.97
IRF3-201ENST00000309877 C22orf23Q9BZE7 217 aa27.37■■□□□ 1.97
IRF3-201ENST00000309877 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.36■■□□□ 1.97
IRF3-201ENST00000309877 MINPP1Q9UNW1 487 aa27.36■■□□□ 1.97
IRF3-201ENST00000309877 SPEF2Q9C093 1822 aa27.36■■□□□ 1.97
IRF3-201ENST00000309877 COL4A1P02462 1669 aa27.36■■□□□ 1.97
IRF3-201ENST00000309877 GRAPQ13588 217 aa27.36■■□□□ 1.97
IRF3-201ENST00000309877 CRY2Q49AN0 593 aa27.36■■□□□ 1.97
IRF3-201ENST00000309877 GRAPLQ8TC17 118 aaPredicted RBP27.36■■□□□ 1.97
IRF3-201ENST00000309877 RBM17Q96I25 401 aaKnown RBP27.36■■□□□ 1.97
IRF3-201ENST00000309877 ESYT1Q9BSJ8 1104 aa27.36■■□□□ 1.97
IRF3-201ENST00000309877 REC8O95072 547 aa27.35■■□□□ 1.97
IRF3-201ENST00000309877 FSD1Q9BTV5 496 aa27.35■■□□□ 1.97
IRF3-201ENST00000309877 DIAPH3Q9NSV4 1193 aa27.35■■□□□ 1.97
IRF3-201ENST00000309877 BRIP1Q9BX63 1249 aa27.34■■□□□ 1.97
IRF3-201ENST00000309877 HIP1O00291 1037 aa27.33■■□□□ 1.97
IRF3-201ENST00000309877 EDC3Q96F86 508 aaKnown RBP27.33■■□□□ 1.97
IRF3-201ENST00000309877 ANKRD2Q9GZV1 360 aa27.33■■□□□ 1.97
IRF3-201ENST00000309877 NDUFB9Q9Y6M9 179 aa27.33■■□□□ 1.97
IRF3-201ENST00000309877 QSER1Q2KHR3 1735 aa27.32■■□□□ 1.96
IRF3-201ENST00000309877 AK9Q5TCS8 1911 aa27.32■■□□□ 1.96
IRF3-201ENST00000309877 KLRG2A4D1S0 409 aaPredicted RBP27.32■■□□□ 1.96
IRF3-201ENST00000309877 PAG1Q9NWQ8 432 aa27.32■■□□□ 1.96
IRF3-201ENST00000309877 SNAP23O00161 211 aa27.31■■□□□ 1.96
IRF3-201ENST00000309877 RUFY2Q8WXA3 655 aa27.31■■□□□ 1.96
IRF3-201ENST00000309877 TAF1P21675 1872 aa27.31■■□□□ 1.96
IRF3-201ENST00000309877 GOLIM4O00461 696 aa27.3■■□□□ 1.96
IRF3-201ENST00000309877 UBE4AQ14139 1066 aa27.3■■□□□ 1.96
IRF3-201ENST00000309877 CCDC102BQ68D86 513 aa27.3■■□□□ 1.96
IRF3-201ENST00000309877 ZNF512BQ96KM6 892 aaPredicted RBP27.3■■□□□ 1.96
IRF3-201ENST00000309877 UQCRFS1P1P0C7P4 283 aa27.3■■□□□ 1.96
IRF3-201ENST00000309877 CWC27Q6UX04 472 aaKnown RBP27.3■■□□□ 1.96
IRF3-201ENST00000309877 HOXA10P31260 410 aaPredicted RBP27.29■■□□□ 1.96
IRF3-201ENST00000309877 PDE6BP35913 854 aa27.29■■□□□ 1.96
IRF3-201ENST00000309877 KCNJ4P48050 445 aa27.29■■□□□ 1.96
IRF3-201ENST00000309877 FKBP4Q02790 459 aaKnown RBP eCLIP27.29■■□□□ 1.96
IRF3-201ENST00000309877 NRXN2Q9P2S2 1712 aa27.29■■□□□ 1.96
IRF3-201ENST00000309877 PHKA1P46020 1223 aa27.28■■□□□ 1.96
IRF3-201ENST00000309877 CRAMP1Q96RY5 1269 aa27.28■■□□□ 1.96
IRF3-201ENST00000309877 SNRKQ9NRH2 765 aa27.28■■□□□ 1.96
IRF3-201ENST00000309877 RBM25P49756 843 aaKnown RBP27.27■■□□□ 1.96
IRF3-201ENST00000309877 KBTBD3Q8NAB2 608 aa27.27■■□□□ 1.96
IRF3-201ENST00000309877 USP26Q9BXU7 913 aa27.27■■□□□ 1.96
IRF3-201ENST00000309877 SGSM2O43147 1006 aa27.26■■□□□ 1.95
IRF3-201ENST00000309877 BBOX1O75936 387 aa27.26■■□□□ 1.95
IRF3-201ENST00000309877 ARID4AP29374 1257 aaPredicted RBP27.26■■□□□ 1.95
IRF3-201ENST00000309877 SCARF1Q14162 830 aa27.26■■□□□ 1.95
IRF3-201ENST00000309877 ANO2Q9NQ90 1003 aa27.26■■□□□ 1.95
IRF3-201ENST00000309877 RFX7Q2KHR2 1363 aa27.25■■□□□ 1.95
IRF3-201ENST00000309877 MCAMP43121 646 aa27.25■■□□□ 1.95
IRF3-201ENST00000309877 ZAP70P43403 619 aa27.24■■□□□ 1.95
IRF3-201ENST00000309877 NMIQ13287 307 aaPredicted RBP27.24■■□□□ 1.95
IRF3-201ENST00000309877 SLC16A10Q8TF71 515 aa27.24■■□□□ 1.95
IRF3-201ENST00000309877 DDRGK1Q96HY6 314 aa27.24■■□□□ 1.95
IRF3-201ENST00000309877 PDGFDQ9GZP0 370 aaPredicted RBP27.24■■□□□ 1.95
IRF3-201ENST00000309877 ANKIB1Q9P2G1 1089 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms