RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 C10orf76Q5T2E6 689 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 FAM200AQ8TCP9 573 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 CTNNBL1Q8WYA6 563 aaPredicted RBP4.59□□□□□ -1.67
USH2A-201ENST00000307340 PCMTD1Q96MG8 357 aaPredicted RBP4.59□□□□□ -1.67
USH2A-201ENST00000307340 NYXQ9GZU5 481 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 STRN4Q9NRL3 753 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 PDZRN3Q9UPQ7 1066 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 ACTN2P35609 894 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 CYLC1P35663 651 aaPredicted RBP4.59□□□□□ -1.67
USH2A-201ENST00000307340 P3H4Q92791 437 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 MPHOSPH8Q99549 860 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 FSD1Q9BTV5 496 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 NUTM2DQ5VT03 806 aaPredicted RBP4.59□□□□□ -1.67
USH2A-201ENST00000307340 NUTM2AQ8IVF1 878 aaPredicted RBP4.59□□□□□ -1.67
USH2A-201ENST00000307340 SYCE1Q8N0S2 351 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.59□□□□□ -1.67
USH2A-201ENST00000307340 hCG_1984214I3L0E3 225 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 TMPOP42166 694 aaKnown RBP4.59□□□□□ -1.67
USH2A-201ENST00000307340 STK38Q15208 465 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 CATIPQ7Z7H3 387 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 PPP1R12CQ9BZL4 782 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 ATP10BO94823 1461 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 IQGAP1P46940 1657 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 CCDC77Q9BR77 488 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 TSPOAP1O95153 1857 aa4.59□□□□□ -1.67
USH2A-201ENST00000307340 MAP7Q14244 749 aa4.59□□□□□ -1.68
USH2A-201ENST00000307340 CTAGE9A4FU28 777 aa4.59□□□□□ -1.68
USH2A-201ENST00000307340 SETSIPP0DME0 302 aa4.59□□□□□ -1.68
USH2A-201ENST00000307340 CCDC51Q96ER9 411 aa4.59□□□□□ -1.68
USH2A-201ENST00000307340 IFT74Q96LB3 600 aa4.59□□□□□ -1.68
USH2A-201ENST00000307340 RFX7Q2KHR2 1363 aa4.59□□□□□ -1.68
USH2A-201ENST00000307340 THAP12O43422 761 aa4.59□□□□□ -1.68
USH2A-201ENST00000307340 NUTM2GQ5VZR2 741 aa4.59□□□□□ -1.68
USH2A-201ENST00000307340 PFDN4Q9NQP4 134 aa4.59□□□□□ -1.68
USH2A-201ENST00000307340 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.59□□□□□ -1.68
USH2A-201ENST00000307340 SLC26A4O43511 780 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 EVI5O60447 810 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 HSPA8P11142 646 aaKnown RBP4.58□□□□□ -1.68
USH2A-201ENST00000307340 GOLGA1Q92805 767 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 NCAPGQ9BPX3 1015 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 SECISBP2LQ93073 1101 aaKnown RBP4.58□□□□□ -1.68
USH2A-201ENST00000307340 CRBNQ96SW2 442 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 LRSAM1Q6UWE0 723 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 TM6SF1Q9BZW5 370 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 MYO3AQ8NEV4 1616 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 NUCB1Q02818 461 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 NBPF1Q3BBV0 1214 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 KRT222Q8N1A0 295 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 ARHGAP24Q8N264 748 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 RETREG2Q8NC44 543 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 IPO4Q8TEX9 1081 aaKnown RBP4.58□□□□□ -1.68
USH2A-201ENST00000307340 SH2D4AQ9H788 454 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 RILPL1Q5EBL4 403 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 GOLGA5Q8TBA6 731 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 MED4Q9NPJ6 270 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 ATG3Q9NT62 314 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 ZCCHC11Q5TAX3 1644 aaKnown RBP4.58□□□□□ -1.68
USH2A-201ENST00000307340 ZMYND15Q9H091 742 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 COG6Q9Y2V7 657 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 SOS2Q07890 1332 aaPredicted RBP4.58□□□□□ -1.68
USH2A-201ENST00000307340 MAP4K4O95819 1239 aaPredicted RBP4.58□□□□□ -1.68
USH2A-201ENST00000307340 RARSP54136 660 aaKnown RBP4.58□□□□□ -1.68
USH2A-201ENST00000307340 DEUP1Q05D60 604 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 SURF6O75683 361 aaKnown RBP4.58□□□□□ -1.68
USH2A-201ENST00000307340 GIMAP7Q8NHV1 300 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 LMTK2Q8IWU2 1503 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 CCDC102BQ68D86 513 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 MAIP1Q8WWC4 291 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 TAF4BQ92750 862 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 VCX3BQ9H321 246 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 CFAP58Q5T655 872 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 GPR161Q8N6U8 529 aaKnown RBP4.58□□□□□ -1.68
USH2A-201ENST00000307340 KRI1Q8N9T8 703 aaKnown RBP4.58□□□□□ -1.68
USH2A-201ENST00000307340 DEPDC5O75140 1603 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 MAST3O60307 1309 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 PLCD1P51178 756 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 CCHCR1Q8TD31 782 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 UBE4BO95155 1302 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 PRPF6O94906 941 aaKnown RBP4.58□□□□□ -1.68
USH2A-201ENST00000307340 CUL5Q93034 780 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 CALML4Q96GE6 196 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 KIF3CO14782 793 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 ACTN4O43707 911 aaKnown RBP4.58□□□□□ -1.68
USH2A-201ENST00000307340 TAOK1Q7L7X3 1001 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 BZW2Q9Y6E2 419 aaKnown RBP4.58□□□□□ -1.68
USH2A-201ENST00000307340 TCHHQ07283 1943 aa4.58□□□□□ -1.68
USH2A-201ENST00000307340 LRRC7Q96NW7 1537 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 HOXC6P09630 235 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 RTEL1Q9NZ71 1219 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 VPS37CA5D8V6 355 aaPredicted RBP4.57□□□□□ -1.68
USH2A-201ENST00000307340 MAN1A1P33908 653 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 PPP1R42Q7Z4L9 355 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 RTL9Q8NET4 1388 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 H0YCG3 227 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 CASQ1P31415 396 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 NCBP1Q09161 790 aaKnown RBP4.57□□□□□ -1.68
USH2A-201ENST00000307340 RUFY4Q6ZNE9 571 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 CCDC155Q8N6L0 562 aa4.57□□□□□ -1.68
USH2A-201ENST00000307340 SMARCC1Q92922 1105 aaPredicted RBP4.57□□□□□ -1.68
USH2A-201ENST00000307340 SEC62Q99442 399 aaKnown RBP4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms