RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 EVI5LQ96CN4 794 aa21.35■■□□□ 1.01
KRT28-201ENST00000306658 LRP5O75197 1615 aa21.35■■□□□ 1.01
KRT28-201ENST00000306658 RIC1Q4ADV7 1423 aa21.34■■□□□ 1.01
KRT28-201ENST00000306658 ST5P78524 1137 aa21.34■■□□□ 1.01
KRT28-201ENST00000306658 BOLA2Q9H3K6 86 aa21.34■■□□□ 1.01
KRT28-201ENST00000306658 STK32BQ9NY57 414 aa21.34■■□□□ 1.01
KRT28-201ENST00000306658 AK9Q5TCS8 1911 aa21.34■■□□□ 1.01
KRT28-201ENST00000306658 ATP2B3Q16720 1220 aa21.34■■□□□ 1.01
KRT28-201ENST00000306658 PRR5LQ6MZQ0 368 aa21.34■■□□□ 1.01
KRT28-201ENST00000306658 VGLL2Q8N8G2 317 aa21.34■■□□□ 1.01
KRT28-201ENST00000306658 PNPLA7Q6ZV29 1317 aa21.33■■□□□ 1.01
KRT28-201ENST00000306658 CHMLP26374 656 aa21.33■■□□□ 1
KRT28-201ENST00000306658 SLC15A2Q16348 729 aa21.33■■□□□ 1
KRT28-201ENST00000306658 CCDC158Q5M9N0 1113 aa21.33■■□□□ 1
KRT28-201ENST00000306658 GORABQ5T7V8 394 aa21.33■■□□□ 1
KRT28-201ENST00000306658 CCDC24Q8N4L8 307 aa21.33■■□□□ 1
KRT28-201ENST00000306658 TBC1D32Q96NH3 1257 aa21.33■■□□□ 1
KRT28-201ENST00000306658 POLRMTO00411 1230 aaKnown RBP21.32■■□□□ 1
KRT28-201ENST00000306658 ILDR1Q86SU0 546 aaPredicted RBP21.32■■□□□ 1
KRT28-201ENST00000306658 XAGE2Q96GT9 111 aa21.32■■□□□ 1
KRT28-201ENST00000306658 C22orf23Q9BZE7 217 aa21.32■■□□□ 1
KRT28-201ENST00000306658 BSDC1Q9NW68 430 aaPredicted RBP21.32■■□□□ 1
KRT28-201ENST00000306658 PUM3Q15397 648 aaKnown RBP21.31■■□□□ 1
KRT28-201ENST00000306658 DDX46Q7L014 1031 aaKnown RBP21.31■■□□□ 1
KRT28-201ENST00000306658 CCDC125Q86Z20 511 aa21.31■■□□□ 1
KRT28-201ENST00000306658 CASZ1Q86V15 1759 aa21.31■■□□□ 1
KRT28-201ENST00000306658 REC8O95072 547 aa21.31■■□□□ 1
KRT28-201ENST00000306658 DDR1Q08345 913 aa21.31■■□□□ 1
KRT28-201ENST00000306658 RPS8P62241 208 aaKnown RBP21.3■■□□□ 1
KRT28-201ENST00000306658 LPIN2Q92539 896 aa21.3■■□□□ 1
KRT28-201ENST00000306658 HAUS7Q99871 368 aa21.3■■□□□ 1
KRT28-201ENST00000306658 HIP1O00291 1037 aa21.29■■□□□ 1
KRT28-201ENST00000306658 HELBQ8NG08 1087 aaPredicted RBP21.29■■□□□ 1
KRT28-201ENST00000306658 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.29■■□□□ 1
KRT28-201ENST00000306658 CHRNDQ07001 517 aa21.28■■□□□ 1
KRT28-201ENST00000306658 TTC39AQ5SRH9 613 aa21.28■■□□□ 1
KRT28-201ENST00000306658 CELF1Q92879 486 aaKnown RBP21.28■■□□□ 1
KRT28-201ENST00000306658 ESYT1Q9BSJ8 1104 aa21.28■■□□□ 1
KRT28-201ENST00000306658 ANO8Q9HCE9 1232 aaPredicted RBP21.28■■□□□ 1
KRT28-201ENST00000306658 SPEF2Q9C093 1822 aa21.28■■□□□ 1
KRT28-201ENST00000306658 IFIT1P09914 478 aaKnown RBP21.28■■□□□ 1
KRT28-201ENST00000306658 SLC5A1P13866 664 aa21.28■■□□□ 1
KRT28-201ENST00000306658 FGFR2P21802 821 aa21.28■■□□□ 1
KRT28-201ENST00000306658 ADORA1P30542 326 aa21.28■■□□□ 1
KRT28-201ENST00000306658 DEFB132Q7Z7B7 95 aa21.28■■□□□ 1
KRT28-201ENST00000306658 RUFY2Q8WXA3 655 aa21.27■■□□□ 1
KRT28-201ENST00000306658 DNAJC2Q99543 621 aaKnown RBP21.27■■□□□ 1
KRT28-201ENST00000306658 DIAPH3Q9NSV4 1193 aa21.27■■□□□ 1
KRT28-201ENST00000306658 PARP3Q9Y6F1 533 aa21.27■■□□□ 1
KRT28-201ENST00000306658 TAF5LO75529 589 aa21.26■□□□□ 0.99
KRT28-201ENST00000306658 RBM25P49756 843 aaKnown RBP21.26■□□□□ 0.99
KRT28-201ENST00000306658 RPGRQ92834 1020 aaKnown RBP21.26■□□□□ 0.99
KRT28-201ENST00000306658 FSD1Q9BTV5 496 aa21.26■□□□□ 0.99
KRT28-201ENST00000306658 TAF1P21675 1872 aa21.25■□□□□ 0.99
KRT28-201ENST00000306658 TNRC6CQ9HCJ0 1690 aaKnown RBP21.25■□□□□ 0.99
KRT28-201ENST00000306658 CRY2Q49AN0 593 aa21.25■□□□□ 0.99
KRT28-201ENST00000306658 DDRGK1Q96HY6 314 aa21.25■□□□□ 0.99
KRT28-201ENST00000306658 ZNF512BQ96KM6 892 aaPredicted RBP21.25■□□□□ 0.99
KRT28-201ENST00000306658 MINPP1Q9UNW1 487 aa21.25■□□□□ 0.99
KRT28-201ENST00000306658 MMP10P09238 476 aa21.24■□□□□ 0.99
KRT28-201ENST00000306658 TICAM2Q86XR7 235 aa21.24■□□□□ 0.99
KRT28-201ENST00000306658 QSER1Q2KHR3 1735 aa21.24■□□□□ 0.99
KRT28-201ENST00000306658 GRAPQ13588 217 aa21.24■□□□□ 0.99
KRT28-201ENST00000306658 GRAPLQ8TC17 118 aaPredicted RBP21.24■□□□□ 0.99
KRT28-201ENST00000306658 USP26Q9BXU7 913 aa21.24■□□□□ 0.99
KRT28-201ENST00000306658 ANKRD2Q9GZV1 360 aa21.24■□□□□ 0.99
KRT28-201ENST00000306658 PAG1Q9NWQ8 432 aa21.24■□□□□ 0.99
KRT28-201ENST00000306658 CWC27Q6UX04 472 aaKnown RBP21.23■□□□□ 0.99
KRT28-201ENST00000306658 RBM17Q96I25 401 aaKnown RBP21.23■□□□□ 0.99
KRT28-201ENST00000306658 IPO9Q96P70 1041 aaKnown RBP21.23■□□□□ 0.99
KRT28-201ENST00000306658 BRIP1Q9BX63 1249 aa21.23■□□□□ 0.99
KRT28-201ENST00000306658 COL4A1P02462 1669 aa21.22■□□□□ 0.99
KRT28-201ENST00000306658 KLRG2A4D1S0 409 aaPredicted RBP21.22■□□□□ 0.99
KRT28-201ENST00000306658 UQCRFS1P1P0C7P4 283 aa21.22■□□□□ 0.99
KRT28-201ENST00000306658 UBE4AQ14139 1066 aa21.22■□□□□ 0.99
KRT28-201ENST00000306658 EDC3Q96F86 508 aaKnown RBP21.22■□□□□ 0.99
KRT28-201ENST00000306658 RFX7Q2KHR2 1363 aa21.22■□□□□ 0.99
KRT28-201ENST00000306658 GOLIM4O00461 696 aa21.21■□□□□ 0.99
KRT28-201ENST00000306658 SGSM2O43147 1006 aa21.21■□□□□ 0.99
KRT28-201ENST00000306658 EPB41L2O43491 1005 aaKnown RBP21.21■□□□□ 0.99
KRT28-201ENST00000306658 CCDC102BQ68D86 513 aa21.21■□□□□ 0.99
KRT28-201ENST00000306658 KBTBD3Q8NAB2 608 aa21.21■□□□□ 0.99
KRT28-201ENST00000306658 NDUFB9Q9Y6M9 179 aa21.21■□□□□ 0.99
KRT28-201ENST00000306658 FKBP4Q02790 459 aaKnown RBP eCLIP21.21■□□□□ 0.99
KRT28-201ENST00000306658 MSL1Q68DK7 614 aa21.21■□□□□ 0.99
KRT28-201ENST00000306658 ANO2Q9NQ90 1003 aa21.21■□□□□ 0.99
KRT28-201ENST00000306658 ARAP2Q8WZ64 1704 aa21.21■□□□□ 0.99
KRT28-201ENST00000306658 NRXN2Q9P2S2 1712 aa21.21■□□□□ 0.99
KRT28-201ENST00000306658 ARID4AP29374 1257 aaPredicted RBP21.2■□□□□ 0.98
KRT28-201ENST00000306658 HOXA10P31260 410 aaPredicted RBP21.2■□□□□ 0.98
KRT28-201ENST00000306658 PDE6BP35913 854 aa21.19■□□□□ 0.98
KRT28-201ENST00000306658 LRRFIP1Q32MZ4 808 aaKnown RBP21.19■□□□□ 0.98
KRT28-201ENST00000306658 KIAA1211Q6ZU35 1233 aa21.19■□□□□ 0.98
KRT28-201ENST00000306658 CRAMP1Q96RY5 1269 aa21.19■□□□□ 0.98
KRT28-201ENST00000306658 SNAP23O00161 211 aa21.18■□□□□ 0.98
KRT28-201ENST00000306658 BBOX1O75936 387 aa21.18■□□□□ 0.98
KRT28-201ENST00000306658 PHKA1P46020 1223 aa21.18■□□□□ 0.98
KRT28-201ENST00000306658 KCNJ4P48050 445 aa21.18■□□□□ 0.98
KRT28-201ENST00000306658 RAD50Q92878 1312 aa21.18■□□□□ 0.98
KRT28-201ENST00000306658 NMIQ13287 307 aaPredicted RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms