RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 PDRG1Q9NUG6 133 aa16.98■□□□□ 0.31
RAB40A-201ENST00000304236 RBM27Q9P2N5 1060 aaKnown RBP16.98■□□□□ 0.31
RAB40A-201ENST00000304236 SMC3Q9UQE7 1217 aa16.98■□□□□ 0.31
RAB40A-201ENST00000304236 UBR3Q6ZT12 1888 aa16.98■□□□□ 0.31
RAB40A-201ENST00000304236 PSMA5P28066 241 aa16.98■□□□□ 0.31
RAB40A-201ENST00000304236 HS1BP3Q53T59 392 aa16.98■□□□□ 0.31
RAB40A-201ENST00000304236 PRPF40BQ6NWY9 871 aaKnown RBP16.98■□□□□ 0.31
RAB40A-201ENST00000304236 LRP10Q7Z4F1 713 aa16.98■□□□□ 0.31
RAB40A-201ENST00000304236 MAP4K1Q92918 833 aa16.98■□□□□ 0.31
RAB40A-201ENST00000304236 JAKMIP1Q96N16 626 aaKnown RBP16.98■□□□□ 0.31
RAB40A-201ENST00000304236 RPAP1Q9BWH6 1393 aaPredicted RBP16.98■□□□□ 0.31
RAB40A-201ENST00000304236 ZSCAN22P10073 491 aaPredicted RBP16.97■□□□□ 0.31
RAB40A-201ENST00000304236 YBX3P16989 372 aaKnown RBP eCLIP16.97■□□□□ 0.31
RAB40A-201ENST00000304236 RBSNQ9H1K0 784 aa16.97■□□□□ 0.31
RAB40A-201ENST00000304236 RTCBQ9Y3I0 505 aaKnown RBP16.97■□□□□ 0.31
RAB40A-201ENST00000304236 ERBB4Q15303 1308 aa16.97■□□□□ 0.31
RAB40A-201ENST00000304236 NMIQ13287 307 aaPredicted RBP16.97■□□□□ 0.31
RAB40A-201ENST00000304236 RC3H1Q5TC82 1133 aaKnown RBP16.97■□□□□ 0.31
RAB40A-201ENST00000304236 RNF20Q5VTR2 975 aa16.97■□□□□ 0.31
RAB40A-201ENST00000304236 STX6O43752 255 aa16.96■□□□□ 0.31
RAB40A-201ENST00000304236 KCNJ4P48050 445 aa16.96■□□□□ 0.31
RAB40A-201ENST00000304236 RABL6Q3YEC7 729 aaPredicted RBP16.96■□□□□ 0.31
RAB40A-201ENST00000304236 TRAPPC3LQ5T215 181 aa16.96■□□□□ 0.31
RAB40A-201ENST00000304236 CREB3L3Q68CJ9 461 aa16.96■□□□□ 0.31
RAB40A-201ENST00000304236 SLC4A9Q96Q91 983 aa16.96■□□□□ 0.31
RAB40A-201ENST00000304236 RBM8AQ9Y5S9 174 aaKnown RBP16.96■□□□□ 0.31
RAB40A-201ENST00000304236 USP16Q9Y5T5 823 aa16.96■□□□□ 0.31
RAB40A-201ENST00000304236 LAMB4A4D0S4 1761 aa16.96■□□□□ 0.31
RAB40A-201ENST00000304236 AFDNP55196 1824 aaKnown RBP16.96■□□□□ 0.31
RAB40A-201ENST00000304236 CHAMP1Q96JM3 812 aa16.95■□□□□ 0.3
RAB40A-201ENST00000304236 FSD1Q9BTV5 496 aa16.95■□□□□ 0.3
RAB40A-201ENST00000304236 SIL1Q9H173 461 aa16.95■□□□□ 0.3
RAB40A-201ENST00000304236 NSFL1CQ9UNZ2 370 aaKnown RBP16.95■□□□□ 0.3
RAB40A-201ENST00000304236 RFX7Q2KHR2 1363 aa16.95■□□□□ 0.3
RAB40A-201ENST00000304236 SYCE3A1L190 88 aa16.95■□□□□ 0.3
RAB40A-201ENST00000304236 CSPP1Q1MSJ5 1256 aa16.95■□□□□ 0.3
RAB40A-201ENST00000304236 USP48Q86UV5 1035 aa16.95■□□□□ 0.3
RAB40A-201ENST00000304236 ALDH8A1Q9H2A2 487 aaPredicted RBP16.95■□□□□ 0.3
RAB40A-201ENST00000304236 BOLA2Q9H3K6 86 aa16.95■□□□□ 0.3
RAB40A-201ENST00000304236 ADRA2BP18089 450 aa16.94■□□□□ 0.3
RAB40A-201ENST00000304236 ATP5JP18859 108 aa16.94■□□□□ 0.3
RAB40A-201ENST00000304236 SYT1P21579 422 aa16.94■□□□□ 0.3
RAB40A-201ENST00000304236 RFX5P48382 616 aaPredicted RBP16.94■□□□□ 0.3
RAB40A-201ENST00000304236 ANKRD1Q15327 319 aa16.94■□□□□ 0.3
RAB40A-201ENST00000304236 EPHA10Q5JZY3 1008 aa16.94■□□□□ 0.3
RAB40A-201ENST00000304236 PLBD2Q8NHP8 589 aa16.94■□□□□ 0.3
RAB40A-201ENST00000304236 HMG20BQ9P0W2 317 aa16.94■□□□□ 0.3
RAB40A-201ENST00000304236 ARFGEF2Q9Y6D5 1785 aa16.94■□□□□ 0.3
RAB40A-201ENST00000304236 CNTNAP4Q9C0A0 1308 aa16.93■□□□□ 0.3
RAB40A-201ENST00000304236 PTCD1O75127 700 aaKnown RBP16.93■□□□□ 0.3
RAB40A-201ENST00000304236 PDLIM2Q96JY6 352 aa16.93■□□□□ 0.3
RAB40A-201ENST00000304236 FAM227BQ96M60 508 aa16.93■□□□□ 0.3
RAB40A-201ENST00000304236 MED23Q9ULK4 1368 aa16.93■□□□□ 0.3
RAB40A-201ENST00000304236 F13A1P00488 732 aa16.93■□□□□ 0.3
RAB40A-201ENST00000304236 ADCK5Q3MIX3 580 aa16.93■□□□□ 0.3
RAB40A-201ENST00000304236 ZSCAN30Q86W11 494 aa16.93■□□□□ 0.3
RAB40A-201ENST00000304236 TLR7Q9NYK1 1049 aaKnown RBP16.93■□□□□ 0.3
RAB40A-201ENST00000304236 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.93■□□□□ 0.3
RAB40A-201ENST00000304236 ZNF831Q5JPB2 1677 aa16.92■□□□□ 0.3
RAB40A-201ENST00000304236 TCHHQ07283 1943 aa16.92■□□□□ 0.3
RAB40A-201ENST00000304236 SLC27A2O14975 620 aa16.92■□□□□ 0.3
RAB40A-201ENST00000304236 RPS6KA4O75676 772 aa16.92■□□□□ 0.3
RAB40A-201ENST00000304236 LETM1O95202 739 aaPredicted RBP16.92■□□□□ 0.3
RAB40A-201ENST00000304236 PTPN12Q05209 780 aaKnown RBP16.92■□□□□ 0.3
RAB40A-201ENST00000304236 TSGA10IPQ3SY00 556 aa16.92■□□□□ 0.3
RAB40A-201ENST00000304236 NLGN1Q8N2Q7 840 aa16.92■□□□□ 0.3
RAB40A-201ENST00000304236 TSPY26PQ9H489 355 aa16.92■□□□□ 0.3
RAB40A-201ENST00000304236 MMP10P09238 476 aa16.91■□□□□ 0.3
RAB40A-201ENST00000304236 GJB2P29033 226 aa16.91■□□□□ 0.3
RAB40A-201ENST00000304236 TNNI3KQ59H18 835 aa16.91■□□□□ 0.3
RAB40A-201ENST00000304236 TICAM2Q86XR7 235 aa16.91■□□□□ 0.3
RAB40A-201ENST00000304236 CCDC83Q8IWF9 413 aa16.91■□□□□ 0.3
RAB40A-201ENST00000304236 ARHGEF1Q92888 912 aaKnown RBP16.91■□□□□ 0.3
RAB40A-201ENST00000304236 FPGT-TNNI3KV9GXZ4 949 aa16.91■□□□□ 0.3
RAB40A-201ENST00000304236 A0A087WZG4 1122 aa16.91■□□□□ 0.3
RAB40A-201ENST00000304236 A0A0D9SFI3 127 aa16.91■□□□□ 0.3
RAB40A-201ENST00000304236 CPA1P15085 419 aa16.91■□□□□ 0.3
RAB40A-201ENST00000304236 RFC4P35249 363 aa16.91■□□□□ 0.3
RAB40A-201ENST00000304236 KLHDC4Q8TBB5 520 aa16.91■□□□□ 0.3
RAB40A-201ENST00000304236 UBE2HP62256 183 aa16.9■□□□□ 0.3
RAB40A-201ENST00000304236 KRT32Q14532 448 aa16.9■□□□□ 0.3
RAB40A-201ENST00000304236 BLOC1S2Q6QNY1 142 aa16.9■□□□□ 0.3
RAB40A-201ENST00000304236 UBE3BQ7Z3V4 1068 aa16.9■□□□□ 0.3
RAB40A-201ENST00000304236 GADD45BO75293 160 aaPredicted RBP16.89■□□□□ 0.3
RAB40A-201ENST00000304236 LARGE1O95461 756 aa16.89■□□□□ 0.3
RAB40A-201ENST00000304236 CASP7P55210 303 aa16.89■□□□□ 0.3
RAB40A-201ENST00000304236 PDCP20941 246 aa16.89■□□□□ 0.29
RAB40A-201ENST00000304236 TFCP2Q12800 502 aa16.89■□□□□ 0.29
RAB40A-201ENST00000304236 ME3Q16798 604 aa16.89■□□□□ 0.29
RAB40A-201ENST00000304236 CCDC183Q5T5S1 534 aa16.89■□□□□ 0.29
RAB40A-201ENST00000304236 FAM184AQ8NB25 1140 aa16.89■□□□□ 0.29
RAB40A-201ENST00000304236 DBNLQ9UJU6 430 aaKnown RBP16.89■□□□□ 0.29
RAB40A-201ENST00000304236 H7C1W4 665 aa16.88■□□□□ 0.29
RAB40A-201ENST00000304236 RPS6KB1P23443 525 aa16.88■□□□□ 0.29
RAB40A-201ENST00000304236 MSNP26038 577 aaKnown RBP16.88■□□□□ 0.29
RAB40A-201ENST00000304236 CRKLP46109 303 aaKnown RBP16.88■□□□□ 0.29
RAB40A-201ENST00000304236 USPL1Q5W0Q7 1092 aa16.88■□□□□ 0.29
RAB40A-201ENST00000304236 LARP6Q9BRS8 491 aaKnown RBP16.88■□□□□ 0.29
RAB40A-201ENST00000304236 GDPD2Q9HCC8 539 aa16.88■□□□□ 0.29
RAB40A-201ENST00000304236 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms