RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 ANKRD20A12PQ8NF67 263 aa9.77□□□□□ -0.84
SNRPD1-201ENST00000300413 SPATA31A5Q5VU36 1347 aa9.77□□□□□ -0.85
SNRPD1-201ENST00000300413 SPATA31A7Q8IWB4 1347 aa9.77□□□□□ -0.85
SNRPD1-201ENST00000300413 MINDY4BA8MYZ0 360 aa9.77□□□□□ -0.85
SNRPD1-201ENST00000300413 HIBADHP31937 336 aaKnown RBP9.77□□□□□ -0.85
SNRPD1-201ENST00000300413 ATP2B2Q01814 1243 aa9.77□□□□□ -0.85
SNRPD1-201ENST00000300413 PA2G4Q9UQ80 394 aaKnown RBP9.77□□□□□ -0.85
SNRPD1-201ENST00000300413 SIGLEC1Q9BZZ2 1709 aa9.77□□□□□ -0.85
SNRPD1-201ENST00000300413 HSPA1LP34931 641 aa9.77□□□□□ -0.85
SNRPD1-201ENST00000300413 RPS8P62241 208 aaKnown RBP9.77□□□□□ -0.85
SNRPD1-201ENST00000300413 MFSD6Q6ZSS7 791 aa9.77□□□□□ -0.85
SNRPD1-201ENST00000300413 USP44Q9H0E7 712 aa9.77□□□□□ -0.85
SNRPD1-201ENST00000300413 LDHBP07195 334 aaKnown RBP9.76□□□□□ -0.85
SNRPD1-201ENST00000300413 ATP2B4P23634 1241 aa9.76□□□□□ -0.85
SNRPD1-201ENST00000300413 CC2D2BQ6DHV5 1058 aa9.76□□□□□ -0.85
SNRPD1-201ENST00000300413 CATIPQ7Z7H3 387 aa9.76□□□□□ -0.85
SNRPD1-201ENST00000300413 ESYT1Q9BSJ8 1104 aa9.76□□□□□ -0.85
SNRPD1-201ENST00000300413 IFT172Q9UG01 1749 aa9.76□□□□□ -0.85
SNRPD1-201ENST00000300413 A0A1B0GUL7 405 aa9.76□□□□□ -0.85
SNRPD1-201ENST00000300413 TPM3P06753 285 aa9.76□□□□□ -0.85
SNRPD1-201ENST00000300413 CCDC12Q8WUD4 166 aaPredicted RBP9.76□□□□□ -0.85
SNRPD1-201ENST00000300413 NUP133Q8WUM0 1156 aa9.76□□□□□ -0.85
SNRPD1-201ENST00000300413 COPRSQ9NQ92 184 aa9.76□□□□□ -0.85
SNRPD1-201ENST00000300413 LIMCH1Q9UPQ0 1083 aa9.76□□□□□ -0.85
SNRPD1-201ENST00000300413 ZBTB1Q9Y2K1 713 aa9.76□□□□□ -0.85
SNRPD1-201ENST00000300413 KIF20BQ96Q89 1820 aa9.76□□□□□ -0.85
SNRPD1-201ENST00000300413 KIAA2012Q0VF49 1180 aa9.76□□□□□ -0.85
SNRPD1-201ENST00000300413 HOOK2Q96ED9 719 aa9.76□□□□□ -0.85
SNRPD1-201ENST00000300413 SEC63Q9UGP8 760 aaKnown RBP9.76□□□□□ -0.85
SNRPD1-201ENST00000300413 ADAMTSL3P82987 1691 aa9.76□□□□□ -0.85
SNRPD1-201ENST00000300413 GOLGA6L19H0YKK7 550 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 TRIM37O94972 964 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 HCLS1P14317 486 aaPredicted RBP9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 NKX1-1Q15270 411 aaPredicted RBP9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 TPD52L1Q16890 204 aaPredicted RBP9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 SLC9C2Q5TAH2 1124 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 FOXD4L5Q5VV16 416 aaPredicted RBP9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 TMED8Q6PL24 325 aaPredicted RBP9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 FOXD4L4Q8WXT5 416 aaPredicted RBP9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 ESR2Q92731 530 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 SNRKQ9NRH2 765 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 CFAP45Q9UL16 551 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 GNAQP50148 359 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 GRIPAP1Q4V328 841 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 TTLL7Q6ZT98 887 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 PLEKHM2Q8IWE5 1019 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 RBM27Q9P2N5 1060 aaKnown RBP9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 CEP131Q9UPN4 1083 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 MAGEB6P1A0A0J9YX57 407 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 UFL1O94874 794 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 NBPF7P0C2Y1 421 aaPredicted RBP9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 MCM5P33992 734 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 TNNI2P48788 182 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 LARP1BQ659C4 914 aaKnown RBP9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 SLC12A7Q9Y666 1083 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 ATP10DQ9P241 1426 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 TULP1O00294 542 aaPredicted RBP9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 SEMA3EO15041 775 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 KRT85P78386 507 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 RC3H1Q5TC82 1133 aaKnown RBP9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 DPP8Q6V1X1 898 aaPredicted RBP9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 NEK1Q96PY6 1258 aa9.75□□□□□ -0.85
SNRPD1-201ENST00000300413 BECN2A8MW95 431 aa9.74□□□□□ -0.85
SNRPD1-201ENST00000300413 EHMT1Q9H9B1 1298 aa9.74□□□□□ -0.85
SNRPD1-201ENST00000300413 IFIT3O14879 490 aaKnown RBP9.74□□□□□ -0.85
SNRPD1-201ENST00000300413 CLSTN1O94985 981 aa9.74□□□□□ -0.85
SNRPD1-201ENST00000300413 ZNF219Q9P2Y4 722 aaPredicted RBP9.74□□□□□ -0.85
SNRPD1-201ENST00000300413 TNNQ9UQP3 1299 aa9.74□□□□□ -0.85
SNRPD1-201ENST00000300413 RANBP6O60518 1105 aaKnown RBP9.74□□□□□ -0.85
SNRPD1-201ENST00000300413 SSFA2P28290 1259 aa9.74□□□□□ -0.85
SNRPD1-201ENST00000300413 STK38Q15208 465 aa9.74□□□□□ -0.85
SNRPD1-201ENST00000300413 USPL1Q5W0Q7 1092 aa9.74□□□□□ -0.85
SNRPD1-201ENST00000300413 MPHOSPH10O00566 681 aaKnown RBP9.73□□□□□ -0.85
SNRPD1-201ENST00000300413 BBOX1O75936 387 aa9.73□□□□□ -0.85
SNRPD1-201ENST00000300413 TPM1P09493 284 aa9.73□□□□□ -0.85
SNRPD1-201ENST00000300413 CALM1P0DP23 149 aa9.73□□□□□ -0.85
SNRPD1-201ENST00000300413 CALM2P0DP24 149 aa9.73□□□□□ -0.85
SNRPD1-201ENST00000300413 CALM3P0DP25 149 aa9.73□□□□□ -0.85
SNRPD1-201ENST00000300413 ATP5JP18859 108 aa9.73□□□□□ -0.85
SNRPD1-201ENST00000300413 UBE4AQ14139 1066 aa9.73□□□□□ -0.85
SNRPD1-201ENST00000300413 TTC6Q86TZ1 520 aa9.73□□□□□ -0.85
SNRPD1-201ENST00000300413 SLC4A4Q9Y6R1 1079 aa9.73□□□□□ -0.85
SNRPD1-201ENST00000300413 XAGE2Q96GT9 111 aa9.73□□□□□ -0.85
SNRPD1-201ENST00000300413 NARFQ9UHQ1 456 aa9.73□□□□□ -0.85
SNRPD1-201ENST00000300413 LEMD3Q9Y2U8 911 aa9.73□□□□□ -0.85
SNRPD1-201ENST00000300413 NF2P35240 595 aa9.73□□□□□ -0.85
SNRPD1-201ENST00000300413 NAT10Q9H0A0 1025 aaKnown RBP9.73□□□□□ -0.85
SNRPD1-201ENST00000300413 CCDC171Q6TFL3 1326 aa9.73□□□□□ -0.85
SNRPD1-201ENST00000300413 TSPY2A6NKD2 308 aa9.73□□□□□ -0.85
SNRPD1-201ENST00000300413 MPNDQ8N594 471 aa9.73□□□□□ -0.85
SNRPD1-201ENST00000300413 SASS6Q6UVJ0 657 aa9.72□□□□□ -0.85
SNRPD1-201ENST00000300413 APPBP2Q92624 585 aa9.72□□□□□ -0.85
SNRPD1-201ENST00000300413 TBC1D32Q96NH3 1257 aa9.72□□□□□ -0.85
SNRPD1-201ENST00000300413 MYO5BQ9ULV0 1848 aa9.72□□□□□ -0.85
SNRPD1-201ENST00000300413 MSNP26038 577 aaKnown RBP9.72□□□□□ -0.85
SNRPD1-201ENST00000300413 LMOD1P29536 600 aaPredicted RBP9.72□□□□□ -0.85
SNRPD1-201ENST00000300413 SLC4A3P48751 1232 aa9.72□□□□□ -0.85
SNRPD1-201ENST00000300413 DNTTIP2Q5QJE6 756 aaKnown RBP9.72□□□□□ -0.85
SNRPD1-201ENST00000300413 CDK5RAP3Q96JB5 506 aa9.72□□□□□ -0.85
SNRPD1-201ENST00000300413 KAT14Q9H8E8 782 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms