RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 ATAD2Q6PL18 1390 aa12.66□□□□□ -0.38
HDGFL3-201ENST00000299633 A6NNZ2 444 aa12.66□□□□□ -0.38
HDGFL3-201ENST00000299633 TAF7Q15545 349 aaPredicted RBP12.66□□□□□ -0.38
HDGFL3-201ENST00000299633 TUBB8Q3ZCM7 444 aa12.66□□□□□ -0.38
HDGFL3-201ENST00000299633 ZSCAN31Q96LW9 406 aaPredicted RBP12.66□□□□□ -0.38
HDGFL3-201ENST00000299633 Q9H521 79 aa12.66□□□□□ -0.38
HDGFL3-201ENST00000299633 ZNF622Q969S3 477 aaKnown RBP eCLIP12.66□□□□□ -0.384e-6■■□□□ 13.5
HDGFL3-201ENST00000299633 HAUS8Q9BT25 410 aa12.66□□□□□ -0.38
HDGFL3-201ENST00000299633 PSMD6Q15008 389 aa12.66□□□□□ -0.38
HDGFL3-201ENST00000299633 KIAA1524Q8TCG1 905 aa12.66□□□□□ -0.38
HDGFL3-201ENST00000299633 UBAC1Q9BSL1 405 aa12.66□□□□□ -0.38
HDGFL3-201ENST00000299633 PCYT1AP49585 367 aa12.65□□□□□ -0.38
HDGFL3-201ENST00000299633 ARFGAP2Q8N6H7 521 aa12.65□□□□□ -0.38
HDGFL3-201ENST00000299633 RP1P56715 2156 aa12.65□□□□□ -0.38
HDGFL3-201ENST00000299633 ATP6V1AP38606 617 aa12.65□□□□□ -0.38
HDGFL3-201ENST00000299633 NOLC1Q14978 699 aaKnown RBP eCLIP12.65□□□□□ -0.38
HDGFL3-201ENST00000299633 ZFXP17010 805 aaPredicted RBP12.65□□□□□ -0.38
HDGFL3-201ENST00000299633 GEN1Q17RS7 908 aa12.65□□□□□ -0.38
HDGFL3-201ENST00000299633 IQGAP2Q13576 1575 aa12.65□□□□□ -0.38
HDGFL3-201ENST00000299633 VAV2P52735 878 aa12.65□□□□□ -0.38
HDGFL3-201ENST00000299633 NACAP1Q9BZK3 213 aa12.65□□□□□ -0.38
HDGFL3-201ENST00000299633 SPECC1L-ADORA2AF8WAN1 911 aa12.65□□□□□ -0.38
HDGFL3-201ENST00000299633 SLC4A2P04920 1241 aa12.65□□□□□ -0.38
HDGFL3-201ENST00000299633 CCDC172P0C7W6 258 aa12.65□□□□□ -0.38
HDGFL3-201ENST00000299633 FERMT3Q86UX7 667 aa12.65□□□□□ -0.38
HDGFL3-201ENST00000299633 UBA5Q9GZZ9 404 aa12.65□□□□□ -0.38
HDGFL3-201ENST00000299633 NLRP2Q9NX02 1062 aa12.65□□□□□ -0.38
HDGFL3-201ENST00000299633 RAB11FIP4Q86YS3 637 aa12.65□□□□□ -0.38
HDGFL3-201ENST00000299633 PDRG1Q9NUG6 133 aa12.65□□□□□ -0.39
HDGFL3-201ENST00000299633 RNF216Q9NWF9 866 aaPredicted RBP12.65□□□□□ -0.39
HDGFL3-201ENST00000299633 LARSQ9P2J5 1176 aaKnown RBP12.65□□□□□ -0.39
HDGFL3-201ENST00000299633 SMIM23A6NLE4 172 aa12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 TTC39AQ5SRH9 613 aa12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 EFCC1Q9HA90 598 aa12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 NKIRAS1Q9NYS0 192 aa12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 FAN1Q9Y2M0 1017 aa12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 MRFAP1Q9Y605 127 aa12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 IWS1Q96ST2 819 aa12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 NESP48681 1621 aa12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 CCDC196A0A1B0GTZ2 297 aa12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 IRX4P78413 519 aa12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 FCHSD2O94868 740 aa12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 CFAP70Q5T0N1 1121 aa12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 BAG1Q99933 345 aaPredicted RBP12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 CAVIN2O95810 425 aa12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 KRT13P13646 458 aa12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 ATF7IPQ6VMQ6 1270 aa12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 RAPGEF4Q8WZA2 1011 aa12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 ZBTB41Q5SVQ8 909 aa12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 SCAND2PQ9GZW5 306 aaPredicted RBP12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 TRIP11Q15643 1979 aa12.64□□□□□ -0.39
HDGFL3-201ENST00000299633 MAN1A2O60476 641 aa12.63□□□□□ -0.39
HDGFL3-201ENST00000299633 GAS8O95995 478 aa12.63□□□□□ -0.39
HDGFL3-201ENST00000299633 AFAP1L2Q8N4X5 818 aa12.63□□□□□ -0.39
HDGFL3-201ENST00000299633 RAB34Q9BZG1 259 aa12.63□□□□□ -0.39
HDGFL3-201ENST00000299633 CASTP20810 708 aaKnown RBP12.63□□□□□ -0.39
HDGFL3-201ENST00000299633 TSGA10Q9BZW7 698 aa12.63□□□□□ -0.39
HDGFL3-201ENST00000299633 PRAM1Q96QH2 718 aa12.63□□□□□ -0.39
HDGFL3-201ENST00000299633 BAG4O95429 457 aaKnown RBP12.63□□□□□ -0.39
HDGFL3-201ENST00000299633 SRCIN1Q9C0H9 1055 aa12.63□□□□□ -0.39
HDGFL3-201ENST00000299633 CACYBPQ9HB71 228 aaKnown RBP12.63□□□□□ -0.39
HDGFL3-201ENST00000299633 TTC21AQ8NDW8 1320 aa12.63□□□□□ -0.39
HDGFL3-201ENST00000299633 GPRASP1Q5JY77 1395 aa12.63□□□□□ -0.39
HDGFL3-201ENST00000299633 SLC8A1P32418 973 aa12.63□□□□□ -0.39
HDGFL3-201ENST00000299633 BCAP29Q9UHQ4 241 aa12.63□□□□□ -0.39
HDGFL3-201ENST00000299633 MYH14Q7Z406 1995 aaKnown RBP12.63□□□□□ -0.39
HDGFL3-201ENST00000299633 BLOC1S2Q6QNY1 142 aa12.63□□□□□ -0.39
HDGFL3-201ENST00000299633 PIK3R5Q8WYR1 880 aa12.63□□□□□ -0.39
HDGFL3-201ENST00000299633 PHEXP78562 749 aa12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 ABTB2Q8N961 1025 aa12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 PSPC1Q8WXF1 523 aaKnown RBP12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 CWC27Q6UX04 472 aaKnown RBP12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 PPP1R9AQ9ULJ8 1098 aa12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 NSD3Q9BZ95 1437 aa12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 CAMSAP2Q08AD1 1489 aa12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 HCLS1P14317 486 aaPredicted RBP12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 MX2P20592 715 aa12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 CCT4P50991 539 aaKnown RBP12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 CCDC89Q8N998 374 aa12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 DAAM1Q9Y4D1 1078 aa12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 MYO1BO43795 1136 aa12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 ZC3H6P61129 1189 aaKnown RBP12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 CUL4BQ13620 913 aa12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 AKAP2Q9Y2D5 859 aa12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 CAPZA3Q96KX2 299 aa12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 MTRF1LQ9UGC7 380 aaKnown RBP12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 SCINQ9Y6U3 715 aa12.62□□□□□ -0.39
HDGFL3-201ENST00000299633 ICE1Q9Y2F5 2266 aa12.61□□□□□ -0.39
HDGFL3-201ENST00000299633 GIGYF1O75420 1035 aaPredicted RBP12.61□□□□□ -0.39
HDGFL3-201ENST00000299633 TUBBP07437 444 aa12.61□□□□□ -0.39
HDGFL3-201ENST00000299633 GJC2Q5T442 439 aaPredicted RBP12.61□□□□□ -0.39
HDGFL3-201ENST00000299633 AACSQ86V21 672 aa12.61□□□□□ -0.39
HDGFL3-201ENST00000299633 LONP1P36776 959 aaKnown RBP12.61□□□□□ -0.39
HDGFL3-201ENST00000299633 KRT32Q14532 448 aa12.61□□□□□ -0.39
HDGFL3-201ENST00000299633 GAS2L2Q8NHY3 880 aa12.61□□□□□ -0.39
HDGFL3-201ENST00000299633 SCHIP1Q9P0W5 487 aaPredicted RBP12.61□□□□□ -0.39
HDGFL3-201ENST00000299633 KIF6Q6ZMV9 814 aa12.61□□□□□ -0.39
HDGFL3-201ENST00000299633 CPLX3Q8WVH0 158 aa12.61□□□□□ -0.39
HDGFL3-201ENST00000299633 UBLCP1Q8WVY7 318 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms