RNA–Protein interactions for RNA: ENST00000294256.12

SYVN1-201, Transcript of synoviolin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYVN1, Length 3,048 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-201ENST00000294256 SPATA32Q96LK8 384 aa20.82■□□□□ 0.92
SYVN1-201ENST00000294256 FAM177BA6PVY3 158 aa20.81■□□□□ 0.92
SYVN1-201ENST00000294256 SPC24Q8NBT2 197 aa20.81■□□□□ 0.92
SYVN1-201ENST00000294256 TTC12Q9H892 705 aaPredicted RBP20.81■□□□□ 0.92
SYVN1-201ENST00000294256 CCDC39Q9UFE4 941 aa20.81■□□□□ 0.92
SYVN1-201ENST00000294256 ALS2Q96Q42 1657 aa20.81■□□□□ 0.92
SYVN1-201ENST00000294256 KDM4AO75164 1064 aa20.81■□□□□ 0.92
SYVN1-201ENST00000294256 CCDC57Q2TAC2 916 aa20.81■□□□□ 0.92
SYVN1-201ENST00000294256 DNAJC10Q8IXB1 793 aa20.81■□□□□ 0.92
SYVN1-201ENST00000294256 TMEM87AQ8NBN3 555 aa20.81■□□□□ 0.92
SYVN1-201ENST00000294256 ZKSCAN5Q9Y2L8 839 aa20.81■□□□□ 0.92
SYVN1-201ENST00000294256 TMOD3Q9NYL9 352 aa20.8■□□□□ 0.92
SYVN1-201ENST00000294256 HMG20BQ9P0W2 317 aa20.8■□□□□ 0.92
SYVN1-201ENST00000294256 AFDNP55196 1824 aaKnown RBP20.8■□□□□ 0.92
SYVN1-201ENST00000294256 DNTTIP2Q5QJE6 756 aaKnown RBP20.8■□□□□ 0.92
SYVN1-201ENST00000294256 BICD2Q8TD16 824 aa20.8■□□□□ 0.92
SYVN1-201ENST00000294256 U3KPZ7 1027 aaPredicted RBP20.8■□□□□ 0.92
SYVN1-201ENST00000294256 KIF1AQ12756 1690 aa20.8■□□□□ 0.92
SYVN1-201ENST00000294256 FTOQ9C0B1 505 aaKnown RBP eCLIP20.8■□□□□ 0.92
SYVN1-201ENST00000294256 CEP126Q9P2H0 1117 aa20.8■□□□□ 0.92
SYVN1-201ENST00000294256 EYA2O00167 538 aa20.79■□□□□ 0.92
SYVN1-201ENST00000294256 CSPP1Q1MSJ5 1256 aa20.79■□□□□ 0.92
SYVN1-201ENST00000294256 GPHNQ9NQX3 736 aaPredicted RBP20.79■□□□□ 0.92
SYVN1-201ENST00000294256 SLAIN2Q9P270 581 aa20.79■□□□□ 0.92
SYVN1-201ENST00000294256 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.79■□□□□ 0.92
SYVN1-201ENST00000294256 PDCP20941 246 aa20.79■□□□□ 0.92
SYVN1-201ENST00000294256 DACT1Q9NYF0 836 aa20.79■□□□□ 0.92
SYVN1-201ENST00000294256 SCRN1Q12765 414 aa20.78■□□□□ 0.92
SYVN1-201ENST00000294256 IL15P40933 162 aaPredicted RBP20.78■□□□□ 0.92
SYVN1-201ENST00000294256 KRT32Q14532 448 aa20.78■□□□□ 0.92
SYVN1-201ENST00000294256 TTC39AQ5SRH9 613 aa20.78■□□□□ 0.92
SYVN1-201ENST00000294256 CRYBG1Q9Y4K1 1723 aa20.78■□□□□ 0.92
SYVN1-201ENST00000294256 ZNF335Q9H4Z2 1342 aaPredicted RBP20.78■□□□□ 0.92
SYVN1-201ENST00000294256 ARID3AQ99856 593 aa20.78■□□□□ 0.92
SYVN1-201ENST00000294256 RBM10P98175 930 aaKnown RBP20.77■□□□□ 0.92
SYVN1-201ENST00000294256 GTF3C6Q969F1 213 aa20.77■□□□□ 0.92
SYVN1-201ENST00000294256 FBXW7Q969H0 707 aa20.77■□□□□ 0.92
SYVN1-201ENST00000294256 CAMTA1Q9Y6Y1 1673 aa20.77■□□□□ 0.92
SYVN1-201ENST00000294256 M0R2C6 588 aa20.76■□□□□ 0.91
SYVN1-201ENST00000294256 SCARF1Q14162 830 aa20.76■□□□□ 0.91
SYVN1-201ENST00000294256 STRCP1A6NGW2 1772 aa20.76■□□□□ 0.91
SYVN1-201ENST00000294256 HSPD1P10809 573 aaKnown RBP20.76■□□□□ 0.91
SYVN1-201ENST00000294256 CCDC191Q8NCU4 936 aa20.76■□□□□ 0.91
SYVN1-201ENST00000294256 NUP62CLQ9H1M0 184 aa20.75■□□□□ 0.91
SYVN1-201ENST00000294256 ERVV-2B6SEH9 535 aa20.75■□□□□ 0.91
SYVN1-201ENST00000294256 USPL1Q5W0Q7 1092 aa20.75■□□□□ 0.91
SYVN1-201ENST00000294256 OFD1O75665 1012 aa20.75■□□□□ 0.91
SYVN1-201ENST00000294256 OSBP2Q969R2 916 aa20.75■□□□□ 0.91
SYVN1-201ENST00000294256 TNMDQ9H2S6 317 aa20.75■□□□□ 0.91
SYVN1-201ENST00000294256 MAST3O60307 1309 aa20.75■□□□□ 0.91
SYVN1-201ENST00000294256 AP5Z1O43299 807 aa20.74■□□□□ 0.91
SYVN1-201ENST00000294256 HLFQ16534 295 aa20.74■□□□□ 0.91
SYVN1-201ENST00000294256 LEO1Q8WVC0 666 aaPredicted RBP20.74■□□□□ 0.91
SYVN1-201ENST00000294256 XAGE2Q96GT9 111 aa20.74■□□□□ 0.91
SYVN1-201ENST00000294256 A0A087WWV3 80 aa20.74■□□□□ 0.91
SYVN1-201ENST00000294256 E7EWF7 191 aa20.74■□□□□ 0.91
SYVN1-201ENST00000294256 OTUD7BQ6GQQ9 843 aa20.74■□□□□ 0.91
SYVN1-201ENST00000294256 LUZP1Q86V48 1076 aa20.74■□□□□ 0.91
SYVN1-201ENST00000294256 CCDC158Q5M9N0 1113 aa20.73■□□□□ 0.91
SYVN1-201ENST00000294256 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.73■□□□□ 0.91
SYVN1-201ENST00000294256 KIF6Q6ZMV9 814 aa20.73■□□□□ 0.91
SYVN1-201ENST00000294256 PIGBQ92521 554 aa20.73■□□□□ 0.91
SYVN1-201ENST00000294256 BTG4Q9NY30 223 aa20.73■□□□□ 0.91
SYVN1-201ENST00000294256 COL18A1P39060 1754 aa20.73■□□□□ 0.91
SYVN1-201ENST00000294256 NR1I2O75469 434 aa20.73■□□□□ 0.91
SYVN1-201ENST00000294256 LETM1O95202 739 aaPredicted RBP20.73■□□□□ 0.91
SYVN1-201ENST00000294256 ZAP70P43403 619 aa20.73■□□□□ 0.91
SYVN1-201ENST00000294256 RNF113AO15541 343 aaKnown RBP20.72■□□□□ 0.91
SYVN1-201ENST00000294256 DHX32Q7L7V1 743 aaKnown RBP20.72■□□□□ 0.91
SYVN1-201ENST00000294256 HELBQ8NG08 1087 aaPredicted RBP20.72■□□□□ 0.91
SYVN1-201ENST00000294256 ARFGEF2Q9Y6D5 1785 aa20.72■□□□□ 0.91
SYVN1-201ENST00000294256 MAP3K11Q16584 847 aa20.72■□□□□ 0.91
SYVN1-201ENST00000294256 HS1BP3Q53T59 392 aa20.72■□□□□ 0.91
SYVN1-201ENST00000294256 TBC1D2BQ9UPU7 963 aa20.72■□□□□ 0.91
SYVN1-201ENST00000294256 ADAMTS7Q9UKP4 1686 aa20.72■□□□□ 0.91
SYVN1-201ENST00000294256 PTPDC1A2A3K4 754 aa20.72■□□□□ 0.91
SYVN1-201ENST00000294256 CCDC192P0DO97 292 aa20.72■□□□□ 0.91
SYVN1-201ENST00000294256 TCIRG1Q13488 830 aa20.72■□□□□ 0.91
SYVN1-201ENST00000294256 IFIT5Q13325 482 aaKnown RBP20.71■□□□□ 0.91
SYVN1-201ENST00000294256 METTL24Q5JXM2 366 aa20.71■□□□□ 0.91
SYVN1-201ENST00000294256 ERCC4Q92889 916 aaPredicted RBP20.71■□□□□ 0.91
SYVN1-201ENST00000294256 ZMYM1Q5SVZ6 1142 aa20.71■□□□□ 0.91
SYVN1-201ENST00000294256 PGBD1Q96JS3 809 aa20.71■□□□□ 0.91
SYVN1-201ENST00000294256 TSGA10IPQ3SY00 556 aa20.7■□□□□ 0.9
SYVN1-201ENST00000294256 LDHAL6AQ6ZMR3 332 aa20.7■□□□□ 0.9
SYVN1-201ENST00000294256 CARD10Q9BWT7 1032 aa20.7■□□□□ 0.9
SYVN1-201ENST00000294256 CNNM1Q9NRU3 951 aa20.7■□□□□ 0.9
SYVN1-201ENST00000294256 SNAP23O00161 211 aa20.7■□□□□ 0.9
SYVN1-201ENST00000294256 STK11IPQ8N1F8 1099 aa20.7■□□□□ 0.9
SYVN1-201ENST00000294256 SCAND2PQ9GZW5 306 aaPredicted RBP20.7■□□□□ 0.9
SYVN1-201ENST00000294256 CPDO75976 1380 aa20.7■□□□□ 0.9
SYVN1-201ENST00000294256 APPP05067 770 aa20.7■□□□□ 0.9
SYVN1-201ENST00000294256 ANO6Q4KMQ2 910 aa20.7■□□□□ 0.9
SYVN1-201ENST00000294256 GJB4Q9NTQ9 266 aa20.7■□□□□ 0.9
SYVN1-201ENST00000294256 TYRO3Q06418 890 aa20.69■□□□□ 0.9
SYVN1-201ENST00000294256 PUS7LQ9H0K6 701 aaKnown RBP20.69■□□□□ 0.9
SYVN1-201ENST00000294256 GREM2Q9H772 168 aa20.69■□□□□ 0.9
SYVN1-201ENST00000294256 HELLSQ9NRZ9 838 aa20.69■□□□□ 0.9
SYVN1-201ENST00000294256 KIAA2012Q0VF49 1180 aa20.69■□□□□ 0.9
SYVN1-201ENST00000294256 FUCA2Q9BTY2 467 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms