RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 EYA1Q99502 592 aa14.68□□□□□ -0.06
PTCD1-201ENST00000292478 AOX1Q06278 1338 aa14.67□□□□□ -0.06
PTCD1-201ENST00000292478 IL2RBP14784 551 aa14.67□□□□□ -0.06
PTCD1-201ENST00000292478 TDRD12Q587J7 1177 aaKnown RBP14.67□□□□□ -0.06
PTCD1-201ENST00000292478 ATL3Q6DD88 541 aa14.67□□□□□ -0.06
PTCD1-201ENST00000292478 CCDC144CPQ8IYA2 1237 aa14.67□□□□□ -0.06
PTCD1-201ENST00000292478 NYXQ9GZU5 481 aa14.67□□□□□ -0.06
PTCD1-201ENST00000292478 RTL9Q8NET4 1388 aa14.67□□□□□ -0.06
PTCD1-201ENST00000292478 RLBP1P12271 317 aa14.67□□□□□ -0.06
PTCD1-201ENST00000292478 UTP14AQ9BVJ6 771 aaKnown RBP14.67□□□□□ -0.06
PTCD1-201ENST00000292478 C19orf44Q9H6X5 657 aa14.67□□□□□ -0.06
PTCD1-201ENST00000292478 TSPYL6Q8N831 410 aa14.67□□□□□ -0.06
PTCD1-201ENST00000292478 HOXC9P31274 260 aa14.67□□□□□ -0.06
PTCD1-201ENST00000292478 ERMNQ8TAM6 284 aa14.67□□□□□ -0.06
PTCD1-201ENST00000292478 CNPY2Q9Y2B0 182 aa14.67□□□□□ -0.06
PTCD1-201ENST00000292478 SHTN1A0MZ66 631 aa14.66□□□□□ -0.06
PTCD1-201ENST00000292478 SSR1P43307 286 aaKnown RBP14.66□□□□□ -0.06
PTCD1-201ENST00000292478 NLRP3Q96P20 1036 aa14.66□□□□□ -0.06
PTCD1-201ENST00000292478 RNMTO43148 476 aaKnown RBP14.66□□□□□ -0.06
PTCD1-201ENST00000292478 HCLS1P14317 486 aaPredicted RBP14.66□□□□□ -0.06
PTCD1-201ENST00000292478 SLC39A6Q13433 755 aa14.66□□□□□ -0.06
PTCD1-201ENST00000292478 CPLX3Q8WVH0 158 aa14.66□□□□□ -0.06
PTCD1-201ENST00000292478 C16orf45Q96MC5 204 aaPredicted RBP14.66□□□□□ -0.06
PTCD1-201ENST00000292478 SBNO1A3KN83 1393 aa14.66□□□□□ -0.06
PTCD1-201ENST00000292478 ZBTB7BO15156 539 aaPredicted RBP14.66□□□□□ -0.06
PTCD1-201ENST00000292478 GIMAP6Q6P9H5 292 aa14.66□□□□□ -0.06
PTCD1-201ENST00000292478 C16orf71Q8IYS4 520 aaPredicted RBP14.66□□□□□ -0.06
PTCD1-201ENST00000292478 EXOC1Q9NV70 894 aa14.66□□□□□ -0.06
PTCD1-201ENST00000292478 ZRANB1Q9UGI0 708 aa14.66□□□□□ -0.06
PTCD1-201ENST00000292478 DYNC1I1O14576 645 aa14.66□□□□□ -0.06
PTCD1-201ENST00000292478 CHMLP26374 656 aa14.66□□□□□ -0.06
PTCD1-201ENST00000292478 IFI16Q16666 785 aaKnown RBP14.66□□□□□ -0.06
PTCD1-201ENST00000292478 SLC9C2Q5TAH2 1124 aa14.66□□□□□ -0.06
PTCD1-201ENST00000292478 SETDB2Q96T68 719 aa14.66□□□□□ -0.06
PTCD1-201ENST00000292478 CCDC172P0C7W6 258 aa14.65□□□□□ -0.06
PTCD1-201ENST00000292478 PHACTR3Q96KR7 559 aa14.65□□□□□ -0.06
PTCD1-201ENST00000292478 TRMT1Q9NXH9 659 aaKnown RBP14.65□□□□□ -0.06
PTCD1-201ENST00000292478 EIF4G3O43432 1585 aaKnown RBP14.65□□□□□ -0.06
PTCD1-201ENST00000292478 ANKRD62A6NC57 917 aa14.65□□□□□ -0.06
PTCD1-201ENST00000292478 PRC1O43663 620 aa14.65□□□□□ -0.06
PTCD1-201ENST00000292478 TSPY3P0CV98 308 aa14.65□□□□□ -0.06
PTCD1-201ENST00000292478 TSPY8P0CW00 308 aa14.65□□□□□ -0.06
PTCD1-201ENST00000292478 NAA16Q6N069 864 aaPredicted RBP14.65□□□□□ -0.06
PTCD1-201ENST00000292478 JARID2Q92833 1246 aaPredicted RBP14.65□□□□□ -0.06
PTCD1-201ENST00000292478 DISP1Q96F81 1524 aa14.65□□□□□ -0.06
PTCD1-201ENST00000292478 IDEP14735 1019 aa14.65□□□□□ -0.06
PTCD1-201ENST00000292478 CREB3L3Q68CJ9 461 aa14.65□□□□□ -0.06
PTCD1-201ENST00000292478 TAOK3Q9H2K8 898 aa14.65□□□□□ -0.06
PTCD1-201ENST00000292478 DDX21Q9NR30 783 aaKnown RBP eCLIP14.65□□□□□ -0.06
PTCD1-201ENST00000292478 ATP7AQ04656 1500 aa14.65□□□□□ -0.06
PTCD1-201ENST00000292478 ATP6V1AP38606 617 aa14.65□□□□□ -0.06
PTCD1-201ENST00000292478 HS1BP3Q53T59 392 aa14.65□□□□□ -0.06
PTCD1-201ENST00000292478 CEP135Q66GS9 1140 aa14.65□□□□□ -0.06
PTCD1-201ENST00000292478 HELLSQ9NRZ9 838 aa14.65□□□□□ -0.06
PTCD1-201ENST00000292478 ZMYM3Q14202 1370 aa14.65□□□□□ -0.06
PTCD1-201ENST00000292478 RUFY3Q7L099 469 aa14.64□□□□□ -0.07
PTCD1-201ENST00000292478 BRAPQ7Z569 592 aa14.64□□□□□ -0.07
PTCD1-201ENST00000292478 USP26Q9BXU7 913 aa14.64□□□□□ -0.07
PTCD1-201ENST00000292478 CALML3P27482 149 aa14.64□□□□□ -0.07
PTCD1-201ENST00000292478 UBASH3AP57075 661 aa14.64□□□□□ -0.07
PTCD1-201ENST00000292478 PCDH11XQ9BZA7 1347 aa14.64□□□□□ -0.07
PTCD1-201ENST00000292478 PCDH11YQ9BZA8 1340 aa14.64□□□□□ -0.07
PTCD1-201ENST00000292478 N4BP3O15049 544 aa14.64□□□□□ -0.07
PTCD1-201ENST00000292478 GCP02774 474 aa14.64□□□□□ -0.07
PTCD1-201ENST00000292478 ANO6Q4KMQ2 910 aa14.64□□□□□ -0.07
PTCD1-201ENST00000292478 WDHD1O75717 1129 aaPredicted RBP14.64□□□□□ -0.07
PTCD1-201ENST00000292478 DHX32Q7L7V1 743 aaKnown RBP14.64□□□□□ -0.07
PTCD1-201ENST00000292478 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.64□□□□□ -0.07
PTCD1-201ENST00000292478 TRIM47Q96LD4 638 aa14.63□□□□□ -0.07
PTCD1-201ENST00000292478 KIF24Q5T7B8 1368 aa14.63□□□□□ -0.07
PTCD1-201ENST00000292478 MAP3K19Q56UN5 1328 aa14.63□□□□□ -0.07
PTCD1-201ENST00000292478 IL13P35225 146 aa14.63□□□□□ -0.07
PTCD1-201ENST00000292478 GCOM1H8Y6P7 765 aaPredicted RBP14.63□□□□□ -0.07
PTCD1-201ENST00000292478 MYZAPP0CAP1 466 aa14.63□□□□□ -0.07
PTCD1-201ENST00000292478 AK2P54819 239 aa14.63□□□□□ -0.07
PTCD1-201ENST00000292478 ZNF804AQ7Z570 1209 aa14.63□□□□□ -0.07
PTCD1-201ENST00000292478 MAGEB6P1A0A0J9YX57 407 aa14.63□□□□□ -0.07
PTCD1-201ENST00000292478 NEBLO76041 1014 aa14.63□□□□□ -0.07
PTCD1-201ENST00000292478 PLCG2P16885 1265 aa14.63□□□□□ -0.07
PTCD1-201ENST00000292478 CCDC91Q7Z6B0 441 aa14.63□□□□□ -0.07
PTCD1-201ENST00000292478 NFATC2IPQ8NCF5 419 aa14.63□□□□□ -0.07
PTCD1-201ENST00000292478 PA2G4Q9UQ80 394 aaKnown RBP14.63□□□□□ -0.07
PTCD1-201ENST00000292478 VAT1LQ9HCJ6 419 aa14.63□□□□□ -0.07
PTCD1-201ENST00000292478 SPTLC2O15270 562 aa14.62□□□□□ -0.07
PTCD1-201ENST00000292478 STAT6P42226 847 aa14.62□□□□□ -0.07
PTCD1-201ENST00000292478 RRAGBQ5VZM2 374 aa14.62□□□□□ -0.07
PTCD1-201ENST00000292478 DACT1Q9NYF0 836 aa14.62□□□□□ -0.07
PTCD1-201ENST00000292478 PLXNC1O60486 1568 aa14.62□□□□□ -0.07
PTCD1-201ENST00000292478 PANK2Q9BZ23 570 aa14.62□□□□□ -0.07
PTCD1-201ENST00000292478 TBCAO75347 108 aaKnown RBP14.62□□□□□ -0.07
PTCD1-201ENST00000292478 CYLC1P35663 651 aaPredicted RBP14.62□□□□□ -0.07
PTCD1-201ENST00000292478 CKAP4Q07065 602 aaKnown RBP14.62□□□□□ -0.07
PTCD1-201ENST00000292478 DZIP3Q86Y13 1208 aaKnown RBP14.62□□□□□ -0.07
PTCD1-201ENST00000292478 FAM107BQ9H098 131 aa14.62□□□□□ -0.07
PTCD1-201ENST00000292478 TNNQ9UQP3 1299 aa14.62□□□□□ -0.07
PTCD1-201ENST00000292478 LRRC59Q96AG4 307 aaKnown RBP14.62□□□□□ -0.07
PTCD1-201ENST00000292478 ANKRD2Q9GZV1 360 aa14.62□□□□□ -0.07
PTCD1-201ENST00000292478 STX8Q9UNK0 236 aa14.62□□□□□ -0.07
PTCD1-201ENST00000292478 TRIM75PA6NK02 468 aa14.61□□□□□ -0.07
PTCD1-201ENST00000292478 DNM1Q05193 864 aaKnown RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms