RNA–Protein interactions for RNA: ENST00000290330.7

SNF8-201, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNF8, Length 951 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-201ENST00000290330 GPR101Q96P66 508 aaPredicted RBP13.37□□□□□ -0.27
SNF8-201ENST00000290330 BCL2L13Q9BXK5 485 aa13.37□□□□□ -0.27
SNF8-201ENST00000290330 ANKIB1Q9P2G1 1089 aa13.37□□□□□ -0.27
SNF8-201ENST00000290330 MKRN1Q9UHC7 482 aaKnown RBP13.37□□□□□ -0.27
SNF8-201ENST00000290330 CASP7P55210 303 aa13.36□□□□□ -0.27
SNF8-201ENST00000290330 DOK7Q18PE1 504 aa13.36□□□□□ -0.27
SNF8-201ENST00000290330 CDC5LQ99459 802 aaKnown RBP13.36□□□□□ -0.27
SNF8-201ENST00000290330 ZC3H12CQ9C0D7 883 aaKnown RBP13.36□□□□□ -0.27
SNF8-201ENST00000290330 GREM2Q9H772 168 aa13.36□□□□□ -0.27
SNF8-201ENST00000290330 GGA1Q9UJY5 639 aa13.36□□□□□ -0.27
SNF8-201ENST00000290330 RTL9Q8NET4 1388 aa13.35□□□□□ -0.27
SNF8-201ENST00000290330 PSMD14O00487 310 aa13.35□□□□□ -0.27
SNF8-201ENST00000290330 ECE2O60344 883 aa13.35□□□□□ -0.27
SNF8-201ENST00000290330 UFL1O94874 794 aa13.35□□□□□ -0.27
SNF8-201ENST00000290330 PLA2G12BQ9BX93 195 aa13.35□□□□□ -0.27
SNF8-201ENST00000290330 KCNQ5Q9NR82 932 aa13.35□□□□□ -0.27
SNF8-201ENST00000290330 CNOT7Q9UIV1 285 aaKnown RBP13.35□□□□□ -0.27
SNF8-201ENST00000290330 ZBTB12Q9Y330 459 aaPredicted RBP13.35□□□□□ -0.27
SNF8-201ENST00000290330 XDHP47989 1333 aa13.35□□□□□ -0.27
SNF8-201ENST00000290330 CNTNAP1P78357 1384 aa13.34□□□□□ -0.27
SNF8-201ENST00000290330 SHTN1A0MZ66 631 aa13.34□□□□□ -0.27
SNF8-201ENST00000290330 F6X3S4 739 aa13.34□□□□□ -0.27
SNF8-201ENST00000290330 HIRAP54198 1017 aaPredicted RBP13.34□□□□□ -0.27
SNF8-201ENST00000290330 FMR1Q06787 632 aaKnown RBP eCLIP13.34□□□□□ -0.27
SNF8-201ENST00000290330 DPF2Q92785 391 aa13.34□□□□□ -0.27
SNF8-201ENST00000290330 BSDC1Q9NW68 430 aaPredicted RBP13.34□□□□□ -0.27
SNF8-201ENST00000290330 PGAP2Q9UHJ9 254 aa13.34□□□□□ -0.27
SNF8-201ENST00000290330 H7C1D1 291 aa13.33□□□□□ -0.28
SNF8-201ENST00000290330 CSF1RP07333 972 aa13.33□□□□□ -0.28
SNF8-201ENST00000290330 ATP2B4P23634 1241 aa13.33□□□□□ -0.28
SNF8-201ENST00000290330 BEND3Q5T5X7 828 aa13.33□□□□□ -0.28
SNF8-201ENST00000290330 MICALL2Q8IY33 904 aa13.33□□□□□ -0.28
SNF8-201ENST00000290330 TRPM4Q8TD43 1214 aa13.33□□□□□ -0.28
SNF8-201ENST00000290330 ZC3H15Q8WU90 426 aaKnown RBP13.33□□□□□ -0.28
SNF8-201ENST00000290330 MINPP1Q9UNW1 487 aa13.33□□□□□ -0.28
SNF8-201ENST00000290330 WTIPA6NIX2 430 aaPredicted RBP13.32□□□□□ -0.28
SNF8-201ENST00000290330 G3V3G9 751 aa13.32□□□□□ -0.28
SNF8-201ENST00000290330 TRAF5O00463 557 aa13.32□□□□□ -0.28
SNF8-201ENST00000290330 HSPA1AP0DMV8 641 aaKnown RBP13.32□□□□□ -0.28
SNF8-201ENST00000290330 HSPA1BP0DMV9 641 aaKnown RBP13.32□□□□□ -0.28
SNF8-201ENST00000290330 ITGA6P23229 1130 aa13.32□□□□□ -0.28
SNF8-201ENST00000290330 RPS12P25398 132 aaKnown RBP13.32□□□□□ -0.28
SNF8-201ENST00000290330 DCAF8Q5TAQ9 597 aa13.32□□□□□ -0.28
SNF8-201ENST00000290330 CACNA1FO60840 1977 aa13.31□□□□□ -0.28
SNF8-201ENST00000290330 RASSF10A6NK89 507 aa13.31□□□□□ -0.28
SNF8-201ENST00000290330 VIL1P09327 827 aaKnown RBP13.31□□□□□ -0.28
SNF8-201ENST00000290330 IGHMBP2P38935 993 aaKnown RBP13.31□□□□□ -0.28
SNF8-201ENST00000290330 VEGFBP49765 207 aa13.31□□□□□ -0.28
SNF8-201ENST00000290330 DEFB115Q30KQ5 88 aa13.31□□□□□ -0.28
SNF8-201ENST00000290330 FAM161AQ3B820 660 aa13.31□□□□□ -0.28
SNF8-201ENST00000290330 IFFO2Q5TF58 517 aa13.31□□□□□ -0.28
SNF8-201ENST00000290330 CST9Q5W186 159 aa13.31□□□□□ -0.28
SNF8-201ENST00000290330 SAMD7Q7Z3H4 446 aa13.31□□□□□ -0.28
SNF8-201ENST00000290330 EGFRP00533 1210 aa13.3□□□□□ -0.28
SNF8-201ENST00000290330 CCT4P50991 539 aaKnown RBP13.3□□□□□ -0.28
SNF8-201ENST00000290330 FOXO4P98177 505 aa13.3□□□□□ -0.28
SNF8-201ENST00000290330 GLIS2Q9BZE0 524 aaPredicted RBP13.3□□□□□ -0.28
SNF8-201ENST00000290330 ABT1Q9ULW3 272 aaKnown RBP13.3□□□□□ -0.28
SNF8-201ENST00000290330 E9PSI1 815 aa13.29□□□□□ -0.28
SNF8-201ENST00000290330 TBC1D10BQ4KMP7 808 aaPredicted RBP13.29□□□□□ -0.28
SNF8-201ENST00000290330 CDC37L1Q7L3B6 337 aa13.29□□□□□ -0.28
SNF8-201ENST00000290330 PODNQ7Z5L7 613 aa13.29□□□□□ -0.28
SNF8-201ENST00000290330 MPHOSPH8Q99549 860 aa13.29□□□□□ -0.28
SNF8-201ENST00000290330 MED23Q9ULK4 1368 aa13.29□□□□□ -0.28
SNF8-201ENST00000290330 ANKRD18BA2A2Z9 1011 aa13.28□□□□□ -0.28
SNF8-201ENST00000290330 GRM8O00222 908 aa13.28□□□□□ -0.28
SNF8-201ENST00000290330 ALDH1L1O75891 902 aa13.28□□□□□ -0.28
SNF8-201ENST00000290330 SLFN5Q08AF3 891 aa13.28□□□□□ -0.28
SNF8-201ENST00000290330 RBM26Q5T8P6 1007 aaKnown RBP13.28□□□□□ -0.28
SNF8-201ENST00000290330 COL13A1Q5TAT6 717 aaPredicted RBP13.28□□□□□ -0.28
SNF8-201ENST00000290330 RSBN1LQ6PCB5 846 aaPredicted RBP13.28□□□□□ -0.28
SNF8-201ENST00000290330 SLC4A10Q6U841 1118 aa13.28□□□□□ -0.28
SNF8-201ENST00000290330 TXNRD3Q86VQ6 643 aa13.28□□□□□ -0.28
SNF8-201ENST00000290330 AGBL3Q8NEM8 1001 aa13.28□□□□□ -0.28
SNF8-201ENST00000290330 LEMD3Q9Y2U8 911 aa13.28□□□□□ -0.28
SNF8-201ENST00000290330 MYH3P11055 1940 aa13.28□□□□□ -0.28
SNF8-201ENST00000290330 SCN9AQ15858 1988 aa13.27□□□□□ -0.28
SNF8-201ENST00000290330 PCNTO95613 3336 aa13.27□□□□□ -0.28
SNF8-201ENST00000290330 CCER2I3L3R5 266 aa13.27□□□□□ -0.29
SNF8-201ENST00000290330 CELF2O95319 508 aaKnown RBP13.27□□□□□ -0.29
SNF8-201ENST00000290330 IFIT5Q13325 482 aaKnown RBP13.27□□□□□ -0.29
SNF8-201ENST00000290330 EPHA10Q5JZY3 1008 aa13.27□□□□□ -0.29
SNF8-201ENST00000290330 LMBR1LQ6UX01 489 aa13.27□□□□□ -0.29
SNF8-201ENST00000290330 MRPL50Q8N5N7 158 aaKnown RBP13.27□□□□□ -0.29
SNF8-201ENST00000290330 GMLQ99445 158 aa13.27□□□□□ -0.29
SNF8-201ENST00000290330 SRCIN1Q9C0H9 1055 aa13.27□□□□□ -0.29
SNF8-201ENST00000290330 ANKRD2Q9GZV1 360 aa13.27□□□□□ -0.29
SNF8-201ENST00000290330 C9orf78Q9NZ63 289 aaPredicted RBP13.27□□□□□ -0.29
SNF8-201ENST00000290330 TLL2Q9Y6L7 1015 aa13.27□□□□□ -0.29
SNF8-201ENST00000290330 ZNF804BA4D1E1 1349 aa13.27□□□□□ -0.29
SNF8-201ENST00000290330 ZNF609O15014 1411 aa13.27□□□□□ -0.29
SNF8-201ENST00000290330 USP17L3A6NCW0 530 aa13.26□□□□□ -0.29
SNF8-201ENST00000290330 USP17L4A6NCW7 530 aa13.26□□□□□ -0.29
SNF8-201ENST00000290330 ZNF280AP59817 542 aaPredicted RBP13.26□□□□□ -0.29
SNF8-201ENST00000290330 CHRNDQ07001 517 aa13.26□□□□□ -0.29
SNF8-201ENST00000290330 KIF4BQ2VIQ3 1234 aa13.26□□□□□ -0.29
SNF8-201ENST00000290330 USP17L1Q7RTZ2 530 aa13.26□□□□□ -0.29
SNF8-201ENST00000290330 SAPCD2Q86UD0 394 aa13.26□□□□□ -0.29
SNF8-201ENST00000290330 USP48Q86UV5 1035 aa13.26□□□□□ -0.29
SNF8-201ENST00000290330 CDCA7LQ96GN5 454 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms