RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 ATF5Q9Y2D1 282 aaPredicted RBP23.24■■□□□ 1.31
PDLIM3-202ENST00000284770 FPGT-TNNI3KV9GXZ4 949 aa23.24■■□□□ 1.31
PDLIM3-202ENST00000284770 IFIT2P09913 472 aaKnown RBP23.24■■□□□ 1.31
PDLIM3-202ENST00000284770 SRGNP10124 158 aa23.23■■□□□ 1.31
PDLIM3-202ENST00000284770 POLD1P28340 1107 aa23.23■■□□□ 1.31
PDLIM3-202ENST00000284770 VGLL2Q8N8G2 317 aa23.23■■□□□ 1.31
PDLIM3-202ENST00000284770 CRAMP1Q96RY5 1269 aa23.23■■□□□ 1.31
PDLIM3-202ENST00000284770 NPR1P16066 1061 aa23.22■■□□□ 1.31
PDLIM3-202ENST00000284770 MX1P20591 662 aa23.22■■□□□ 1.31
PDLIM3-202ENST00000284770 PDE1AP54750 535 aa23.22■■□□□ 1.31
PDLIM3-202ENST00000284770 OSBPL3Q9H4L5 887 aa23.22■■□□□ 1.31
PDLIM3-202ENST00000284770 AKAP2Q9Y2D5 859 aa23.22■■□□□ 1.31
PDLIM3-202ENST00000284770 TAF1P21675 1872 aa23.22■■□□□ 1.31
PDLIM3-202ENST00000284770 PDE8BO95263 885 aa23.22■■□□□ 1.31
PDLIM3-202ENST00000284770 STAP2Q9UGK3 403 aa23.22■■□□□ 1.31
PDLIM3-202ENST00000284770 CCDC8Q9H0W5 538 aaPredicted RBP23.21■■□□□ 1.31
PDLIM3-202ENST00000284770 BBOX1O75936 387 aa23.2■■□□□ 1.3
PDLIM3-202ENST00000284770 CHRNDQ07001 517 aa23.2■■□□□ 1.3
PDLIM3-202ENST00000284770 C10orf71Q711Q0 1435 aa23.2■■□□□ 1.3
PDLIM3-202ENST00000284770 MASTLQ96GX5 879 aa23.2■■□□□ 1.3
PDLIM3-202ENST00000284770 MINPP1Q9UNW1 487 aa23.2■■□□□ 1.3
PDLIM3-202ENST00000284770 H0YIN7 160 aa23.19■■□□□ 1.3
PDLIM3-202ENST00000284770 C2CD5Q86YS7 1000 aa23.19■■□□□ 1.3
PDLIM3-202ENST00000284770 SPEF2Q9C093 1822 aa23.19■■□□□ 1.3
PDLIM3-202ENST00000284770 A0A1B0GUL7 405 aa23.19■■□□□ 1.3
PDLIM3-202ENST00000284770 ALDH1B1P30837 517 aa23.19■■□□□ 1.3
PDLIM3-202ENST00000284770 TIMM10P62072 90 aa23.19■■□□□ 1.3
PDLIM3-202ENST00000284770 HELBQ8NG08 1087 aaPredicted RBP23.19■■□□□ 1.3
PDLIM3-202ENST00000284770 SGIP1Q9BQI5 828 aa23.19■■□□□ 1.3
PDLIM3-202ENST00000284770 ZNF609O15014 1411 aa23.18■■□□□ 1.3
PDLIM3-202ENST00000284770 NEUROD6Q96NK8 337 aa23.18■■□□□ 1.3
PDLIM3-202ENST00000284770 TLR7Q9NYK1 1049 aaKnown RBP23.18■■□□□ 1.3
PDLIM3-202ENST00000284770 DBNLQ9UJU6 430 aaKnown RBP23.18■■□□□ 1.3
PDLIM3-202ENST00000284770 AOX1Q06278 1338 aa23.18■■□□□ 1.3
PDLIM3-202ENST00000284770 TTC41PQ6P2S7 1318 aa23.18■■□□□ 1.3
PDLIM3-202ENST00000284770 TAF5LO75529 589 aa23.17■■□□□ 1.3
PDLIM3-202ENST00000284770 PUM3Q15397 648 aaKnown RBP23.17■■□□□ 1.3
PDLIM3-202ENST00000284770 ATP2B3Q16720 1220 aa23.17■■□□□ 1.3
PDLIM3-202ENST00000284770 GPATCH3Q96I76 525 aa23.17■■□□□ 1.3
PDLIM3-202ENST00000284770 TSHZ3Q63HK5 1081 aa23.17■■□□□ 1.3
PDLIM3-202ENST00000284770 STYK1Q6J9G0 422 aa23.17■■□□□ 1.3
PDLIM3-202ENST00000284770 ECHDC1Q9NTX5 307 aa23.17■■□□□ 1.3
PDLIM3-202ENST00000284770 FGFR2P21802 821 aa23.16■■□□□ 1.3
PDLIM3-202ENST00000284770 TMC4Q7Z404 712 aa23.16■■□□□ 1.3
PDLIM3-202ENST00000284770 DBNDD2Q9BQY9 259 aa23.16■■□□□ 1.3
PDLIM3-202ENST00000284770 BACH2Q9BYV9 841 aa23.16■■□□□ 1.3
PDLIM3-202ENST00000284770 ANKRD2Q9GZV1 360 aa23.16■■□□□ 1.3
PDLIM3-202ENST00000284770 COL11A2P13942 1736 aaPredicted RBP23.15■■□□□ 1.3
PDLIM3-202ENST00000284770 PTGER2P43116 358 aa23.15■■□□□ 1.3
PDLIM3-202ENST00000284770 TTC22Q5TAA0 569 aa23.15■■□□□ 1.3
PDLIM3-202ENST00000284770 LPIN2Q92539 896 aa23.15■■□□□ 1.3
PDLIM3-202ENST00000284770 CHRNA5P30532 468 aa23.14■■□□□ 1.3
PDLIM3-202ENST00000284770 C8orf34Q49A92 452 aa23.14■■□□□ 1.3
PDLIM3-202ENST00000284770 BMP2KLQ5H9B9 411 aa23.14■■□□□ 1.3
PDLIM3-202ENST00000284770 PI4K2BQ8TCG2 481 aa23.14■■□□□ 1.3
PDLIM3-202ENST00000284770 ZNF622Q969S3 477 aaKnown RBP eCLIP23.14■■□□□ 1.3
PDLIM3-202ENST00000284770 PPEF1O14829 653 aaPredicted RBP23.13■■□□□ 1.29
PDLIM3-202ENST00000284770 ERC2O15083 957 aa23.13■■□□□ 1.29
PDLIM3-202ENST00000284770 XAGE2Q96GT9 111 aa23.13■■□□□ 1.29
PDLIM3-202ENST00000284770 GLRX3O76003 335 aaKnown RBP23.12■■□□□ 1.29
PDLIM3-202ENST00000284770 GSPT1P15170 499 aaKnown RBP23.12■■□□□ 1.29
PDLIM3-202ENST00000284770 UBE4AQ14139 1066 aa23.12■■□□□ 1.29
PDLIM3-202ENST00000284770 SNAP23O00161 211 aa23.12■■□□□ 1.29
PDLIM3-202ENST00000284770 SLC5A1P13866 664 aa23.12■■□□□ 1.29
PDLIM3-202ENST00000284770 SP8Q8IXZ3 490 aa23.12■■□□□ 1.29
PDLIM3-202ENST00000284770 CNKSR1Q969H4 720 aa23.12■■□□□ 1.29
PDLIM3-202ENST00000284770 KIF13BQ9NQT8 1826 aa23.11■■□□□ 1.29
PDLIM3-202ENST00000284770 IFIT1P09914 478 aaKnown RBP23.11■■□□□ 1.29
PDLIM3-202ENST00000284770 ADORA1P30542 326 aa23.11■■□□□ 1.29
PDLIM3-202ENST00000284770 ATP6V0A2Q9Y487 856 aa23.11■■□□□ 1.29
PDLIM3-202ENST00000284770 TGFB2P61812 414 aa23.1■■□□□ 1.29
PDLIM3-202ENST00000284770 GORABQ5T7V8 394 aa23.1■■□□□ 1.29
PDLIM3-202ENST00000284770 SPON1Q9HCB6 807 aa23.1■■□□□ 1.29
PDLIM3-202ENST00000284770 ANKIB1Q9P2G1 1089 aa23.1■■□□□ 1.29
PDLIM3-202ENST00000284770 XDHP47989 1333 aa23.1■■□□□ 1.29
PDLIM3-202ENST00000284770 ATP5JP18859 108 aa23.09■■□□□ 1.29
PDLIM3-202ENST00000284770 CCDC158Q5M9N0 1113 aa23.09■■□□□ 1.29
PDLIM3-202ENST00000284770 A0A1B0GUL6 1792 aa23.09■■□□□ 1.29
PDLIM3-202ENST00000284770 SLC51AQ86UW1 340 aa23.09■■□□□ 1.29
PDLIM3-202ENST00000284770 WTIPA6NIX2 430 aaPredicted RBP23.08■■□□□ 1.29
PDLIM3-202ENST00000284770 DPEP1P16444 411 aa23.08■■□□□ 1.29
PDLIM3-202ENST00000284770 KCNJ4P48050 445 aa23.08■■□□□ 1.29
PDLIM3-202ENST00000284770 PRPF40BQ6NWY9 871 aaKnown RBP23.08■■□□□ 1.29
PDLIM3-202ENST00000284770 LEMD3Q9Y2U8 911 aa23.08■■□□□ 1.29
PDLIM3-202ENST00000284770 CD2APQ9Y5K6 639 aa23.08■■□□□ 1.29
PDLIM3-202ENST00000284770 ZNF804BA4D1E1 1349 aa23.07■■□□□ 1.28
PDLIM3-202ENST00000284770 A0A0G2JLW4 131 aa23.07■■□□□ 1.28
PDLIM3-202ENST00000284770 KCNA3P22001 575 aa23.07■■□□□ 1.28
PDLIM3-202ENST00000284770 GPSM2P81274 684 aa23.07■■□□□ 1.28
PDLIM3-202ENST00000284770 PODXL2Q9NZ53 605 aa23.07■■□□□ 1.28
PDLIM3-202ENST00000284770 NSFL1CQ9UNZ2 370 aaKnown RBP23.07■■□□□ 1.28
PDLIM3-202ENST00000284770 SDSP20132 328 aa23.06■■□□□ 1.28
PDLIM3-202ENST00000284770 TMX4Q9H1E5 349 aaPredicted RBP23.06■■□□□ 1.28
PDLIM3-202ENST00000284770 BOLA2Q9H3K6 86 aa23.06■■□□□ 1.28
PDLIM3-202ENST00000284770 RBM19Q9Y4C8 960 aaKnown RBP23.06■■□□□ 1.28
PDLIM3-202ENST00000284770 LRRC37AA6NMS7 1700 aa23.06■■□□□ 1.28
PDLIM3-202ENST00000284770 TTC39AQ5SRH9 613 aa23.06■■□□□ 1.28
PDLIM3-202ENST00000284770 ARAP2Q8WZ64 1704 aa23.05■■□□□ 1.28
PDLIM3-202ENST00000284770 CCDC102BQ68D86 513 aa23.05■■□□□ 1.28
PDLIM3-202ENST00000284770 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms