RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 SREBF2Q12772 1141 aa16.07■□□□□ 0.16
MRPS28-201ENST00000276585 SUSD4Q5VX71 490 aa16.07■□□□□ 0.16
MRPS28-201ENST00000276585 OTOP1Q7RTM1 612 aa16.07■□□□□ 0.16
MRPS28-201ENST00000276585 R3HDMLQ9H3Y0 253 aa16.07■□□□□ 0.16
MRPS28-201ENST00000276585 IBTKQ9P2D0 1353 aaPredicted RBP16.07■□□□□ 0.16
MRPS28-201ENST00000276585 CENPFP49454 3210 aa16.07■□□□□ 0.16
MRPS28-201ENST00000276585 ASTN2O75129 1339 aaPredicted RBP16.06■□□□□ 0.16
MRPS28-201ENST00000276585 UBN2Q6ZU65 1347 aa16.06■□□□□ 0.16
MRPS28-201ENST00000276585 CHL1O00533 1208 aa16.06■□□□□ 0.16
MRPS28-201ENST00000276585 MOB2Q70IA6 237 aa16.06■□□□□ 0.16
MRPS28-201ENST00000276585 SP8Q8IXZ3 490 aa16.06■□□□□ 0.16
MRPS28-201ENST00000276585 TMEM106CQ9BVX2 250 aa16.06■□□□□ 0.16
MRPS28-201ENST00000276585 DBNDD1Q9H9R9 158 aa16.06■□□□□ 0.16
MRPS28-201ENST00000276585 BRCA2P51587 3418 aa16.06■□□□□ 0.16
MRPS28-201ENST00000276585 ERBB4Q15303 1308 aa16.05■□□□□ 0.16
MRPS28-201ENST00000276585 UBE2Q2LH0YL09 131 aa16.05■□□□□ 0.16
MRPS28-201ENST00000276585 MNX1P50219 401 aaPredicted RBP16.05■□□□□ 0.16
MRPS28-201ENST00000276585 TTLL12Q14166 644 aaPredicted RBP16.05■□□□□ 0.16
MRPS28-201ENST00000276585 PDIA6Q15084 440 aa16.05■□□□□ 0.16
MRPS28-201ENST00000276585 KRT24Q2M2I5 525 aa16.05■□□□□ 0.16
MRPS28-201ENST00000276585 KIF6Q6ZMV9 814 aa16.05■□□□□ 0.16
MRPS28-201ENST00000276585 TTLL7Q6ZT98 887 aa16.05■□□□□ 0.16
MRPS28-201ENST00000276585 RBBP6Q7Z6E9 1792 aaKnown RBP16.05■□□□□ 0.16
MRPS28-201ENST00000276585 MAP3K15Q6ZN16 1313 aa16.04■□□□□ 0.16
MRPS28-201ENST00000276585 ERVV-1B6SEH8 477 aa16.04■□□□□ 0.16
MRPS28-201ENST00000276585 APAF1O14727 1248 aa16.04■□□□□ 0.16
MRPS28-201ENST00000276585 BBOX1O75936 387 aa16.04■□□□□ 0.16
MRPS28-201ENST00000276585 PROSER3Q2NL68 480 aa16.04■□□□□ 0.16
MRPS28-201ENST00000276585 ANGEL2Q5VTE6 544 aaKnown RBP16.04■□□□□ 0.16
MRPS28-201ENST00000276585 CFHR5Q9BXR6 569 aa16.04■□□□□ 0.16
MRPS28-201ENST00000276585 COL6A3P12111 3177 aa16.04■□□□□ 0.16
MRPS28-201ENST00000276585 LAMB2P55268 1798 aa16.03■□□□□ 0.16
MRPS28-201ENST00000276585 NTSR2O95665 410 aa16.03■□□□□ 0.16
MRPS28-201ENST00000276585 RBM27Q9P2N5 1060 aaKnown RBP16.03■□□□□ 0.16
MRPS28-201ENST00000276585 ZNF853P0CG23 659 aa16.02■□□□□ 0.16
MRPS28-201ENST00000276585 MYL6BP14649 208 aa16.02■□□□□ 0.16
MRPS28-201ENST00000276585 HOXD11P31277 338 aaPredicted RBP16.02■□□□□ 0.16
MRPS28-201ENST00000276585 WASHC4Q2M389 1173 aa16.02■□□□□ 0.16
MRPS28-201ENST00000276585 PPP1R42Q7Z4L9 355 aa16.02■□□□□ 0.16
MRPS28-201ENST00000276585 ARMC5Q96C12 935 aa16.02■□□□□ 0.16
MRPS28-201ENST00000276585 ZBTB3Q9H5J0 574 aa16.02■□□□□ 0.16
MRPS28-201ENST00000276585 PTPN22Q9Y2R2 807 aa16.02■□□□□ 0.16
MRPS28-201ENST00000276585 RIMBP2O15034 1052 aa16.01■□□□□ 0.15
MRPS28-201ENST00000276585 ALDH1A1P00352 501 aa16.01■□□□□ 0.15
MRPS28-201ENST00000276585 ANXA1P04083 346 aa16.01■□□□□ 0.15
MRPS28-201ENST00000276585 SCARF1Q14162 830 aa16.01■□□□□ 0.15
MRPS28-201ENST00000276585 ECE2O60344 883 aa16■□□□□ 0.15
MRPS28-201ENST00000276585 TCIRG1Q13488 830 aa16■□□□□ 0.15
MRPS28-201ENST00000276585 KCNQ5Q9NR82 932 aa16■□□□□ 0.15
MRPS28-201ENST00000276585 RANBP2P49792 3224 aaKnown RBP16■□□□□ 0.15
MRPS28-201ENST00000276585 EIF2S2P20042 333 aaKnown RBP15.99■□□□□ 0.15
MRPS28-201ENST00000276585 DOK7Q18PE1 504 aa15.99■□□□□ 0.15
MRPS28-201ENST00000276585 SLC4A8Q2Y0W8 1093 aa15.99■□□□□ 0.15
MRPS28-201ENST00000276585 DDX46Q7L014 1031 aaKnown RBP15.99■□□□□ 0.15
MRPS28-201ENST00000276585 ERO1AQ96HE7 468 aa15.99■□□□□ 0.15
MRPS28-201ENST00000276585 MBIPQ9NS73 344 aa15.99■□□□□ 0.15
MRPS28-201ENST00000276585 RTL9Q8NET4 1388 aa15.99■□□□□ 0.15
MRPS28-201ENST00000276585 GRAPQ13588 217 aa15.98■□□□□ 0.15
MRPS28-201ENST00000276585 ZNF34Q8IZ26 560 aa15.98■□□□□ 0.15
MRPS28-201ENST00000276585 GRAPLQ8TC17 118 aaPredicted RBP15.98■□□□□ 0.15
MRPS28-201ENST00000276585 CD99L2Q8TCZ2 262 aa15.98■□□□□ 0.15
MRPS28-201ENST00000276585 EFCC1Q9HA90 598 aa15.98■□□□□ 0.15
MRPS28-201ENST00000276585 SCAF8Q9UPN6 1271 aaKnown RBP15.98■□□□□ 0.15
MRPS28-201ENST00000276585 LAS1LQ9Y4W2 734 aaKnown RBP15.98■□□□□ 0.15
MRPS28-201ENST00000276585 DDX60Q8IY21 1712 aaKnown RBP15.97■□□□□ 0.15
MRPS28-201ENST00000276585 DUOX1Q9NRD9 1551 aa15.97■□□□□ 0.15
MRPS28-201ENST00000276585 C6orf229H3BNL8 230 aa15.97■□□□□ 0.15
MRPS28-201ENST00000276585 PARP10Q53GL7 1025 aa15.97■□□□□ 0.15
MRPS28-201ENST00000276585 PRAMEF18Q5VWM3 479 aa15.97■□□□□ 0.15
MRPS28-201ENST00000276585 NECTIN2Q92692 538 aa15.97■□□□□ 0.15
MRPS28-201ENST00000276585 UTP14AQ9BVJ6 771 aaKnown RBP15.97■□□□□ 0.15
MRPS28-201ENST00000276585 PITPNM2Q9BZ72 1349 aa15.96■□□□□ 0.15
MRPS28-201ENST00000276585 HOXB7P09629 217 aa15.96■□□□□ 0.15
MRPS28-201ENST00000276585 NF2P35240 595 aa15.96■□□□□ 0.15
MRPS28-201ENST00000276585 GIGYF2Q6Y7W6 1299 aaKnown RBP15.96■□□□□ 0.15
MRPS28-201ENST00000276585 DPF3Q92784 378 aa15.96■□□□□ 0.15
MRPS28-201ENST00000276585 ZNF333Q96JL9 665 aa15.96■□□□□ 0.15
MRPS28-201ENST00000276585 MRS2Q9HD23 443 aa15.96■□□□□ 0.15
MRPS28-201ENST00000276585 IFT57Q9NWB7 429 aa15.96■□□□□ 0.15
MRPS28-201ENST00000276585 NSFL1CQ9UNZ2 370 aaKnown RBP15.96■□□□□ 0.15
MRPS28-201ENST00000276585 ANP32CO43423 234 aa15.95■□□□□ 0.14
MRPS28-201ENST00000276585 MYCP01106 439 aaPredicted RBP15.95■□□□□ 0.14
MRPS28-201ENST00000276585 SLC10A5Q5PT55 438 aa15.95■□□□□ 0.14
MRPS28-201ENST00000276585 TMC4Q7Z404 712 aa15.95■□□□□ 0.14
MRPS28-201ENST00000276585 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.95■□□□□ 0.14
MRPS28-201ENST00000276585 CHPF2Q9P2E5 772 aa15.95■□□□□ 0.14
MRPS28-201ENST00000276585 ZNF609O15014 1411 aa15.94■□□□□ 0.14
MRPS28-201ENST00000276585 G3V3G9 751 aa15.94■□□□□ 0.14
MRPS28-201ENST00000276585 VIL1P09327 827 aaKnown RBP15.94■□□□□ 0.14
MRPS28-201ENST00000276585 HCLS1P14317 486 aaPredicted RBP15.94■□□□□ 0.14
MRPS28-201ENST00000276585 DCAF8Q5TAQ9 597 aa15.94■□□□□ 0.14
MRPS28-201ENST00000276585 DUSP27Q5VZP5 1158 aa15.94■□□□□ 0.14
MRPS28-201ENST00000276585 NBPF11Q86T75 865 aa15.94■□□□□ 0.14
MRPS28-201ENST00000276585 XAGE3Q8WTP9 111 aa15.94■□□□□ 0.14
MRPS28-201ENST00000276585 EYA3Q99504 573 aa15.94■□□□□ 0.14
MRPS28-201ENST00000276585 TAF1P21675 1872 aa15.94■□□□□ 0.14
MRPS28-201ENST00000276585 ZNF280AP59817 542 aaPredicted RBP15.93■□□□□ 0.14
MRPS28-201ENST00000276585 PTPN12Q05209 780 aaKnown RBP15.93■□□□□ 0.14
MRPS28-201ENST00000276585 PRKG1Q13976 671 aa15.93■□□□□ 0.14
MRPS28-201ENST00000276585 SLC9C1Q4G0N8 1177 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms