RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 CALM2P0DP24 149 aa15.25■□□□□ 0.03
SMG9-201ENST00000270066 CALM3P0DP25 149 aa15.25■□□□□ 0.03
SMG9-201ENST00000270066 MTIF2P46199 727 aaKnown RBP15.25■□□□□ 0.03
SMG9-201ENST00000270066 RBM27Q9P2N5 1060 aaKnown RBP15.25■□□□□ 0.03
SMG9-201ENST00000270066 SAMM50Q9Y512 469 aa15.25■□□□□ 0.03
SMG9-201ENST00000270066 RTL9Q8NET4 1388 aa15.25■□□□□ 0.03
SMG9-201ENST00000270066 F8W031 263 aaPredicted RBP15.25■□□□□ 0.03
SMG9-201ENST00000270066 RNF113AO15541 343 aaKnown RBP15.25■□□□□ 0.03
SMG9-201ENST00000270066 KIF5CO60282 957 aa15.25■□□□□ 0.03
SMG9-201ENST00000270066 GBP2P32456 591 aaPredicted RBP15.25■□□□□ 0.03
SMG9-201ENST00000270066 CCDC102BQ68D86 513 aa15.25■□□□□ 0.03
SMG9-201ENST00000270066 RBM17Q96I25 401 aaKnown RBP15.25■□□□□ 0.03
SMG9-201ENST00000270066 CFAP74Q9C0B2 1584 aa15.25■□□□□ 0.03
SMG9-201ENST00000270066 CCDC40Q4G0X9 1142 aa15.25■□□□□ 0.03
SMG9-201ENST00000270066 CARD14Q9BXL6 1004 aa15.25■□□□□ 0.03
SMG9-201ENST00000270066 RMND1Q9NWS8 449 aa15.25■□□□□ 0.03
SMG9-201ENST00000270066 USO1O60763 962 aaKnown RBP15.25■□□□□ 0.03
SMG9-201ENST00000270066 IDEP14735 1019 aa15.25■□□□□ 0.03
SMG9-201ENST00000270066 DDX21Q9NR30 783 aaKnown RBP eCLIP15.25■□□□□ 0.03
SMG9-201ENST00000270066 PZPP20742 1482 aa15.25■□□□□ 0.03
SMG9-201ENST00000270066 NEO1Q92859 1461 aa15.25■□□□□ 0.03
SMG9-201ENST00000270066 TRAPPC3LQ5T215 181 aa15.24■□□□□ 0.03
SMG9-201ENST00000270066 NUP88Q99567 741 aaPredicted RBP15.24■□□□□ 0.03
SMG9-201ENST00000270066 PANK2Q9BZ23 570 aa15.24■□□□□ 0.03
SMG9-201ENST00000270066 PLCD4Q9BRC7 762 aa15.24■□□□□ 0.03
SMG9-201ENST00000270066 TFIP11Q9UBB9 837 aaKnown RBP15.24■□□□□ 0.03
SMG9-201ENST00000270066 ARHGEF10O15013 1369 aa15.24■□□□□ 0.03
SMG9-201ENST00000270066 CAVIN2O95810 425 aa15.24■□□□□ 0.03
SMG9-201ENST00000270066 PICALMQ13492 652 aa15.24■□□□□ 0.03
SMG9-201ENST00000270066 RAB11FIP4Q86YS3 637 aa15.24■□□□□ 0.03
SMG9-201ENST00000270066 PARP10Q53GL7 1025 aa15.24■□□□□ 0.03
SMG9-201ENST00000270066 ALG1Q9BT22 464 aa15.24■□□□□ 0.03
SMG9-201ENST00000270066 CLIP2Q9UDT6 1046 aa15.24■□□□□ 0.03
SMG9-201ENST00000270066 TBCAO75347 108 aaKnown RBP15.24■□□□□ 0.03
SMG9-201ENST00000270066 UBE2HP62256 183 aa15.24■□□□□ 0.03
SMG9-201ENST00000270066 CKAP2LQ8IYA6 745 aa15.24■□□□□ 0.03
SMG9-201ENST00000270066 PA2G4Q9UQ80 394 aaKnown RBP15.24■□□□□ 0.03
SMG9-201ENST00000270066 PCDHB15Q9Y5E8 787 aa15.24■□□□□ 0.03
SMG9-201ENST00000270066 NEMFO60524 1076 aa15.23■□□□□ 0.03
SMG9-201ENST00000270066 CEP85Q6P2H3 762 aa15.23■□□□□ 0.03
SMG9-201ENST00000270066 GBP3Q9H0R5 595 aa15.23■□□□□ 0.03
SMG9-201ENST00000270066 NF2P35240 595 aa15.23■□□□□ 0.03
SMG9-201ENST00000270066 NMIQ13287 307 aaPredicted RBP15.23■□□□□ 0.03
SMG9-201ENST00000270066 CWF19L2Q2TBE0 894 aaKnown RBP15.23■□□□□ 0.03
SMG9-201ENST00000270066 ANKRD62A6NC57 917 aa15.23■□□□□ 0.03
SMG9-201ENST00000270066 SYCP3Q8IZU3 236 aa15.23■□□□□ 0.03
SMG9-201ENST00000270066 JDP2Q8WYK2 163 aa15.23■□□□□ 0.03
SMG9-201ENST00000270066 HOXB7P09629 217 aa15.23■□□□□ 0.03
SMG9-201ENST00000270066 LIG1P18858 919 aa15.23■□□□□ 0.03
SMG9-201ENST00000270066 TMX3Q96JJ7 454 aa15.23■□□□□ 0.03
SMG9-201ENST00000270066 ZFYVE16Q7Z3T8 1539 aa15.22■□□□□ 0.03
SMG9-201ENST00000270066 ZSCAN22P10073 491 aaPredicted RBP15.22■□□□□ 0.03
SMG9-201ENST00000270066 XRCC6P12956 609 aaKnown RBP eCLIP15.22■□□□□ 0.03
SMG9-201ENST00000270066 ENOX2Q16206 610 aaKnown RBP15.22■□□□□ 0.03
SMG9-201ENST00000270066 PHACTR3Q96KR7 559 aa15.22■□□□□ 0.03
SMG9-201ENST00000270066 USP25Q9UHP3 1055 aa15.22■□□□□ 0.03
SMG9-201ENST00000270066 GNPATO15228 680 aa15.22■□□□□ 0.03
SMG9-201ENST00000270066 CLCN1P35523 988 aa15.22■□□□□ 0.03
SMG9-201ENST00000270066 GSDMDP57764 484 aa15.22■□□□□ 0.03
SMG9-201ENST00000270066 PTPN14Q15678 1187 aa15.22■□□□□ 0.03
SMG9-201ENST00000270066 DCTPP1Q9H773 170 aa15.22■□□□□ 0.03
SMG9-201ENST00000270066 RAD50Q92878 1312 aa15.22■□□□□ 0.03
SMG9-201ENST00000270066 MYCNP04198 464 aaPredicted RBP15.22■□□□□ 0.03
SMG9-201ENST00000270066 FAM193AP78312 1265 aa15.22■□□□□ 0.03
SMG9-201ENST00000270066 TDRD12Q587J7 1177 aaKnown RBP15.22■□□□□ 0.03
SMG9-201ENST00000270066 NSFL1CQ9UNZ2 370 aaKnown RBP15.22■□□□□ 0.03
SMG9-201ENST00000270066 PLBD2Q8NHP8 589 aa15.22■□□□□ 0.03
SMG9-201ENST00000270066 EXOC1Q9NV70 894 aa15.22■□□□□ 0.03
SMG9-201ENST00000270066 TFCP2Q12800 502 aa15.21■□□□□ 0.03
SMG9-201ENST00000270066 Q6ZUG5 572 aa15.21■□□□□ 0.03
SMG9-201ENST00000270066 KCNG4Q8TDN1 519 aa15.21■□□□□ 0.03
SMG9-201ENST00000270066 UBXN4Q92575 508 aa15.21■□□□□ 0.03
SMG9-201ENST00000270066 CENPHQ9H3R5 247 aa15.21■□□□□ 0.03
SMG9-201ENST00000270066 NPC1L1Q9UHC9 1359 aa15.21■□□□□ 0.03
SMG9-201ENST00000270066 LDHBP07195 334 aaKnown RBP15.21■□□□□ 0.03
SMG9-201ENST00000270066 HEATR3Q7Z4Q2 680 aa15.21■□□□□ 0.03
SMG9-201ENST00000270066 TSPYL6Q8N831 410 aa15.21■□□□□ 0.03
SMG9-201ENST00000270066 KIAA0754O94854 1291 aa15.21■□□□□ 0.03
SMG9-201ENST00000270066 CASQ1P31415 396 aa15.21■□□□□ 0.03
SMG9-201ENST00000270066 B4DLN1 442 aa15.21■□□□□ 0.03
SMG9-201ENST00000270066 MRPL12P52815 198 aaKnown RBP15.21■□□□□ 0.03
SMG9-201ENST00000270066 CCDC102AQ96A19 550 aa15.21■□□□□ 0.03
SMG9-201ENST00000270066 PRC1O43663 620 aa15.21■□□□□ 0.02
SMG9-201ENST00000270066 TCERG1LQ5VWI1 586 aa15.21■□□□□ 0.02
SMG9-201ENST00000270066 ZNF790Q6PG37 636 aa15.2■□□□□ 0.02
SMG9-201ENST00000270066 DENND2AQ9ULE3 1009 aa15.2■□□□□ 0.02
SMG9-201ENST00000270066 MAGEB6Q8N7X4 407 aa15.2■□□□□ 0.02
SMG9-201ENST00000270066 C6orf50Q9HD87 102 aa15.2■□□□□ 0.02
SMG9-201ENST00000270066 NAPAP54920 295 aa15.2■□□□□ 0.02
SMG9-201ENST00000270066 BICC1Q9H694 974 aaKnown RBP15.2■□□□□ 0.02
SMG9-201ENST00000270066 CCNL1Q9UK58 526 aaPredicted RBP15.2■□□□□ 0.02
SMG9-201ENST00000270066 EZRP15311 586 aaKnown RBP15.2■□□□□ 0.02
SMG9-201ENST00000270066 TAX1BP1Q86VP1 789 aa15.2■□□□□ 0.02
SMG9-201ENST00000270066 SMARCC2Q8TAQ2 1214 aa15.2■□□□□ 0.02
SMG9-201ENST00000270066 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.2■□□□□ 0.02
SMG9-201ENST00000270066 MCM3P25205 808 aa15.19■□□□□ 0.02
SMG9-201ENST00000270066 CALML3P27482 149 aa15.19■□□□□ 0.02
SMG9-201ENST00000270066 SYKP43405 635 aa15.19■□□□□ 0.02
SMG9-201ENST00000270066 TMCO3Q6UWJ1 677 aa15.19■□□□□ 0.02
SMG9-201ENST00000270066 NECAB1Q8N987 351 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms