RNA–Protein interactions for RNA: ENST00000269347.10

RAB40B-201, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-201ENST00000269347 GBP4Q96PP9 640 aa27.84■■■□□ 2.05
RAB40B-201ENST00000269347 NUCB2P80303 420 aa27.83■■■□□ 2.05
RAB40B-201ENST00000269347 LINC00116Q8NCU8 138 aa27.83■■■□□ 2.05
RAB40B-201ENST00000269347 EP400Q96L91 3159 aa27.83■■■□□ 2.05
RAB40B-201ENST00000269347 DDX60Q8IY21 1712 aaKnown RBP27.83■■■□□ 2.05
RAB40B-201ENST00000269347 VPS53Q5VIR6 699 aa27.83■■■□□ 2.05
RAB40B-201ENST00000269347 A0A0G2JLW4 131 aa27.82■■■□□ 2.04
RAB40B-201ENST00000269347 IFIT1P09914 478 aaKnown RBP27.82■■■□□ 2.04
RAB40B-201ENST00000269347 AKAP11Q9UKA4 1901 aa27.82■■■□□ 2.04
RAB40B-201ENST00000269347 TAF7LQ5H9L4 462 aa27.82■■■□□ 2.04
RAB40B-201ENST00000269347 VGLL2Q8N8G2 317 aa27.82■■■□□ 2.04
RAB40B-201ENST00000269347 MYO5AQ9Y4I1 1855 aaKnown RBP27.81■■■□□ 2.04
RAB40B-201ENST00000269347 KCNJ4P48050 445 aa27.81■■■□□ 2.04
RAB40B-201ENST00000269347 LDHAL6AQ6ZMR3 332 aa27.81■■■□□ 2.04
RAB40B-201ENST00000269347 FNBP4Q8N3X1 1017 aaPredicted RBP27.81■■■□□ 2.04
RAB40B-201ENST00000269347 INTS4Q96HW7 963 aaKnown RBP27.81■■■□□ 2.04
RAB40B-201ENST00000269347 PDE8AO60658 829 aa27.8■■■□□ 2.04
RAB40B-201ENST00000269347 RFX7Q2KHR2 1363 aa27.8■■■□□ 2.04
RAB40B-201ENST00000269347 USPL1Q5W0Q7 1092 aa27.8■■■□□ 2.04
RAB40B-201ENST00000269347 TM6SF1Q9BZW5 370 aa27.8■■■□□ 2.04
RAB40B-201ENST00000269347 PDRG1Q9NUG6 133 aa27.8■■■□□ 2.04
RAB40B-201ENST00000269347 SNAP23O00161 211 aa27.79■■■□□ 2.04
RAB40B-201ENST00000269347 MCTP1Q6DN14 999 aa27.79■■■□□ 2.04
RAB40B-201ENST00000269347 MCMDC2Q4G0Z9 681 aa27.79■■■□□ 2.04
RAB40B-201ENST00000269347 SEC31BQ9NQW1 1179 aa27.79■■■□□ 2.04
RAB40B-201ENST00000269347 BRD1O95696 1058 aa27.78■■■□□ 2.04
RAB40B-201ENST00000269347 FBXO3Q9UK99 471 aa27.78■■■□□ 2.04
RAB40B-201ENST00000269347 LIMCH1Q9UPQ0 1083 aa27.78■■■□□ 2.04
RAB40B-201ENST00000269347 SPEF2Q9C093 1822 aa27.78■■■□□ 2.04
RAB40B-201ENST00000269347 ANKRD18BA2A2Z9 1011 aa27.77■■■□□ 2.04
RAB40B-201ENST00000269347 FKBP4Q02790 459 aaKnown RBP eCLIP27.77■■■□□ 2.04
RAB40B-201ENST00000269347 METTL24Q5JXM2 366 aa27.77■■■□□ 2.04
RAB40B-201ENST00000269347 HELBQ8NG08 1087 aaPredicted RBP27.77■■■□□ 2.04
RAB40B-201ENST00000269347 LRP5O75197 1615 aa27.77■■■□□ 2.04
RAB40B-201ENST00000269347 BCORQ6W2J9 1755 aa27.77■■■□□ 2.04
RAB40B-201ENST00000269347 SH3TC1Q8TE82 1336 aa27.76■■■□□ 2.04
RAB40B-201ENST00000269347 LAMA4Q16363 1823 aa27.76■■■□□ 2.03
RAB40B-201ENST00000269347 CYP46A1Q9Y6A2 500 aa27.76■■■□□ 2.03
RAB40B-201ENST00000269347 ZAP70P43403 619 aa27.76■■■□□ 2.03
RAB40B-201ENST00000269347 ME3Q16798 604 aa27.76■■■□□ 2.03
RAB40B-201ENST00000269347 ZMYM1Q5SVZ6 1142 aa27.76■■■□□ 2.03
RAB40B-201ENST00000269347 TPCN1Q9ULQ1 816 aa27.76■■■□□ 2.03
RAB40B-201ENST00000269347 TAF1P21675 1872 aa27.76■■■□□ 2.03
RAB40B-201ENST00000269347 M0R2C6 588 aa27.75■■■□□ 2.03
RAB40B-201ENST00000269347 NTSR2O95665 410 aa27.75■■■□□ 2.03
RAB40B-201ENST00000269347 CYP21A2P08686 494 aa27.75■■■□□ 2.03
RAB40B-201ENST00000269347 ZKSCAN1P17029 563 aaPredicted RBP27.75■■■□□ 2.03
RAB40B-201ENST00000269347 ATP2B3Q16720 1220 aa27.75■■■□□ 2.03
RAB40B-201ENST00000269347 CNNM1Q9NRU3 951 aa27.75■■■□□ 2.03
RAB40B-201ENST00000269347 LMBRD1Q9NUN5 540 aa27.75■■■□□ 2.03
RAB40B-201ENST00000269347 USP21Q9UK80 565 aa27.75■■■□□ 2.03
RAB40B-201ENST00000269347 MAST3O60307 1309 aa27.75■■■□□ 2.03
RAB40B-201ENST00000269347 BTAF1O14981 1849 aa27.75■■■□□ 2.03
RAB40B-201ENST00000269347 TCHHQ07283 1943 aa27.74■■■□□ 2.03
RAB40B-201ENST00000269347 TTC39AQ5SRH9 613 aa27.74■■■□□ 2.03
RAB40B-201ENST00000269347 STOX1Q6ZVD7 989 aa27.74■■■□□ 2.03
RAB40B-201ENST00000269347 AMIGO3Q86WK7 504 aa27.74■■■□□ 2.03
RAB40B-201ENST00000269347 NECAB1Q8N987 351 aa27.74■■■□□ 2.03
RAB40B-201ENST00000269347 OSBP2Q969R2 916 aa27.74■■■□□ 2.03
RAB40B-201ENST00000269347 NIP7Q9Y221 180 aaKnown RBP eCLIP27.74■■■□□ 2.03
RAB40B-201ENST00000269347 THSD7AQ9UPZ6 1657 aa27.74■■■□□ 2.03
RAB40B-201ENST00000269347 MCAMP43121 646 aa27.73■■■□□ 2.03
RAB40B-201ENST00000269347 CCDC83Q8IWF9 413 aa27.73■■■□□ 2.03
RAB40B-201ENST00000269347 AKAP2Q9Y2D5 859 aa27.73■■■□□ 2.03
RAB40B-201ENST00000269347 TOB2Q14106 344 aaPredicted RBP27.73■■■□□ 2.03
RAB40B-201ENST00000269347 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.73■■■□□ 2.03
RAB40B-201ENST00000269347 CASZ1Q86V15 1759 aa27.72■■■□□ 2.03
RAB40B-201ENST00000269347 FOXP2O15409 715 aa27.72■■■□□ 2.03
RAB40B-201ENST00000269347 UTP14AQ9BVJ6 771 aaKnown RBP27.72■■■□□ 2.03
RAB40B-201ENST00000269347 TSGA10IPQ3SY00 556 aa27.72■■■□□ 2.03
RAB40B-201ENST00000269347 CCDC158Q5M9N0 1113 aa27.72■■■□□ 2.03
RAB40B-201ENST00000269347 GORABQ5T7V8 394 aa27.72■■■□□ 2.03
RAB40B-201ENST00000269347 C3orf67Q6ZVT6 689 aa27.72■■■□□ 2.03
RAB40B-201ENST00000269347 SMARCC1Q92922 1105 aaPredicted RBP27.72■■■□□ 2.03
RAB40B-201ENST00000269347 ZNF831Q5JPB2 1677 aa27.71■■■□□ 2.03
RAB40B-201ENST00000269347 RNF113AO15541 343 aaKnown RBP27.71■■■□□ 2.03
RAB40B-201ENST00000269347 MYH7P12883 1935 aa27.71■■■□□ 2.03
RAB40B-201ENST00000269347 PDE8BO95263 885 aa27.7■■■□□ 2.03
RAB40B-201ENST00000269347 RPS6KB1P23443 525 aa27.7■■■□□ 2.03
RAB40B-201ENST00000269347 FOXD4L6Q3SYB3 417 aaPredicted RBP27.7■■■□□ 2.03
RAB40B-201ENST00000269347 FOXD4L3Q6VB84 417 aaPredicted RBP27.7■■■□□ 2.03
RAB40B-201ENST00000269347 HELLSQ9NRZ9 838 aa27.69■■■□□ 2.02
RAB40B-201ENST00000269347 LAMB2P55268 1798 aa27.69■■■□□ 2.02
RAB40B-201ENST00000269347 PHKA1P46020 1223 aa27.69■■■□□ 2.02
RAB40B-201ENST00000269347 BCL2L12Q9HB09 334 aa27.69■■■□□ 2.02
RAB40B-201ENST00000269347 BRPF3Q9ULD4 1205 aa27.69■■■□□ 2.02
RAB40B-201ENST00000269347 NSFL1CQ9UNZ2 370 aaKnown RBP27.69■■■□□ 2.02
RAB40B-201ENST00000269347 FSD2A1L4K1 749 aa27.68■■■□□ 2.02
RAB40B-201ENST00000269347 HSPD1P10809 573 aaKnown RBP27.68■■■□□ 2.02
RAB40B-201ENST00000269347 TTLL5Q6EMB2 1281 aa27.68■■■□□ 2.02
RAB40B-201ENST00000269347 BLOC1S2Q6QNY1 142 aa27.68■■■□□ 2.02
RAB40B-201ENST00000269347 FGFR2P21802 821 aa27.67■■■□□ 2.02
RAB40B-201ENST00000269347 GAS2L3Q86XJ1 694 aa27.67■■■□□ 2.02
RAB40B-201ENST00000269347 RNF20Q5VTR2 975 aa27.67■■■□□ 2.02
RAB40B-201ENST00000269347 HMG20BQ9P0W2 317 aa27.67■■■□□ 2.02
RAB40B-201ENST00000269347 WTIPA6NIX2 430 aaPredicted RBP27.66■■■□□ 2.02
RAB40B-201ENST00000269347 PRPF40AO75400 957 aaKnown RBP27.66■■■□□ 2.02
RAB40B-201ENST00000269347 LRRC2Q9BYS8 371 aa27.66■■■□□ 2.02
RAB40B-201ENST00000269347 PUS7LQ9H0K6 701 aaKnown RBP27.66■■■□□ 2.02
RAB40B-201ENST00000269347 U3KPZ7 1027 aaPredicted RBP27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms