RNA–Protein interactions for RNA: ENST00000269051.8

RHBDL3-201, Transcript of rhomboid like 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RHBDL3, Length 4,661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-201ENST00000269051 RAD21O60216 631 aa14□□□□□ -0.17
RHBDL3-201ENST00000269051 CWF19L2Q2TBE0 894 aaKnown RBP14□□□□□ -0.17
RHBDL3-201ENST00000269051 SIRT2Q8IXJ6 389 aa14□□□□□ -0.17
RHBDL3-201ENST00000269051 TMEM67Q5HYA8 995 aa13.99□□□□□ -0.17
RHBDL3-201ENST00000269051 SNRKQ9NRH2 765 aa13.99□□□□□ -0.17
RHBDL3-201ENST00000269051 STAP2Q9UGK3 403 aa13.99□□□□□ -0.17
RHBDL3-201ENST00000269051 ERLIN2O94905 339 aa13.99□□□□□ -0.17
RHBDL3-201ENST00000269051 APOBRQ0VD83 1088 aa13.99□□□□□ -0.17
RHBDL3-201ENST00000269051 CLEC17AQ6ZS10 378 aa13.99□□□□□ -0.17
RHBDL3-201ENST00000269051 IFNL2Q8IZJ0 200 aa13.99□□□□□ -0.17
RHBDL3-201ENST00000269051 PYM1Q9BRP8 204 aaKnown RBP13.99□□□□□ -0.17
RHBDL3-201ENST00000269051 NCKAP5LQ9HCH0 1330 aa13.99□□□□□ -0.17
RHBDL3-201ENST00000269051 IL15P40933 162 aaPredicted RBP13.99□□□□□ -0.17
RHBDL3-201ENST00000269051 CCDC82Q8N4S0 544 aa13.99□□□□□ -0.17
RHBDL3-201ENST00000269051 TRIM34Q9BYJ4 488 aa13.99□□□□□ -0.17
RHBDL3-201ENST00000269051 CTAGE1Q96RT6 745 aa13.99□□□□□ -0.17
RHBDL3-201ENST00000269051 TANGO6Q9C0B7 1094 aa13.99□□□□□ -0.17
RHBDL3-201ENST00000269051 TNRQ92752 1358 aa13.99□□□□□ -0.17
RHBDL3-201ENST00000269051 PREX2Q70Z35 1606 aa13.98□□□□□ -0.17
RHBDL3-201ENST00000269051 STARD3NLO95772 234 aa13.98□□□□□ -0.17
RHBDL3-201ENST00000269051 ZNF853P0CG23 659 aa13.98□□□□□ -0.17
RHBDL3-201ENST00000269051 PAG1Q9NWQ8 432 aa13.98□□□□□ -0.17
RHBDL3-201ENST00000269051 RAI14Q9P0K7 980 aa13.98□□□□□ -0.17
RHBDL3-201ENST00000269051 IMPACTQ9P2X3 320 aa13.98□□□□□ -0.17
RHBDL3-201ENST00000269051 SMARCC1Q92922 1105 aaPredicted RBP13.98□□□□□ -0.17
RHBDL3-201ENST00000269051 ZSWIM4Q9H7M6 989 aa13.98□□□□□ -0.17
RHBDL3-201ENST00000269051 SBNO1A3KN83 1393 aa13.98□□□□□ -0.17
RHBDL3-201ENST00000269051 ERBB4Q15303 1308 aa13.98□□□□□ -0.17
RHBDL3-201ENST00000269051 SOGA3Q5TF21 947 aa13.98□□□□□ -0.17
RHBDL3-201ENST00000269051 CDC37L1Q7L3B6 337 aa13.98□□□□□ -0.17
RHBDL3-201ENST00000269051 GOLGA1Q92805 767 aa13.98□□□□□ -0.17
RHBDL3-201ENST00000269051 MTMR6Q9Y217 621 aa13.98□□□□□ -0.17
RHBDL3-201ENST00000269051 MARCKSP29966 332 aaPredicted RBP13.97□□□□□ -0.17
RHBDL3-201ENST00000269051 CHAMP1Q96JM3 812 aa13.97□□□□□ -0.17
RHBDL3-201ENST00000269051 SLC26A6Q9BXS9 759 aa13.97□□□□□ -0.17
RHBDL3-201ENST00000269051 IQGAP3Q86VI3 1631 aa13.97□□□□□ -0.17
RHBDL3-201ENST00000269051 ZBTB43O43298 467 aa13.97□□□□□ -0.17
RHBDL3-201ENST00000269051 CCDC175P0C221 793 aa13.97□□□□□ -0.17
RHBDL3-201ENST00000269051 FKBP15Q5T1M5 1219 aa13.97□□□□□ -0.17
RHBDL3-201ENST00000269051 LMBR1LQ6UX01 489 aa13.97□□□□□ -0.17
RHBDL3-201ENST00000269051 RAB11FIP4Q86YS3 637 aa13.97□□□□□ -0.17
RHBDL3-201ENST00000269051 CEP112Q8N8E3 955 aa13.97□□□□□ -0.17
RHBDL3-201ENST00000269051 ADCY10Q96PN6 1610 aa13.97□□□□□ -0.17
RHBDL3-201ENST00000269051 PATL2C9JE40 543 aaKnown RBP13.97□□□□□ -0.17
RHBDL3-201ENST00000269051 USO1O60763 962 aaKnown RBP13.97□□□□□ -0.17
RHBDL3-201ENST00000269051 USP44Q9H0E7 712 aa13.97□□□□□ -0.17
RHBDL3-201ENST00000269051 PRC1O43663 620 aa13.97□□□□□ -0.17
RHBDL3-201ENST00000269051 IVLP07476 585 aa13.97□□□□□ -0.17
RHBDL3-201ENST00000269051 JARID2Q92833 1246 aaPredicted RBP13.97□□□□□ -0.17
RHBDL3-201ENST00000269051 PTCH1Q13635 1447 aa13.97□□□□□ -0.17
RHBDL3-201ENST00000269051 NBPF7P0C2Y1 421 aaPredicted RBP13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 ME3Q16798 604 aa13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 IQCA1Q86XH1 822 aa13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 CCDC191Q8NCU4 936 aa13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 CTCFLQ8NI51 663 aaPredicted RBP13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 FAM227BQ96M60 508 aa13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 BICC1Q9H694 974 aaKnown RBP13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 MINDY4BA8MYZ0 360 aa13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 HOXC9P31274 260 aa13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 IGHMBP2P38935 993 aaKnown RBP13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 TSC1Q92574 1164 aa13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 PRDM11Q9NQV5 511 aa13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 ANKRD18BA2A2Z9 1011 aa13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 CTAGE15A4D2H0 777 aa13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 CTAGE8P0CG41 777 aa13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 PAFAH1B1P43034 410 aa13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 MYL5Q02045 173 aa13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 CTAGE6Q86UF2 777 aa13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 CTAGE4Q8IX94 777 aa13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 STRN4Q9NRL3 753 aa13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 BMP2KQ9NSY1 1161 aaPredicted RBP13.96□□□□□ -0.17
RHBDL3-201ENST00000269051 AATKQ6ZMQ8 1374 aa13.96□□□□□ -0.18
RHBDL3-201ENST00000269051 A0A1B0GVL5 298 aa13.96□□□□□ -0.18
RHBDL3-201ENST00000269051 N4BP3O15049 544 aa13.96□□□□□ -0.18
RHBDL3-201ENST00000269051 KRT18P05783 430 aaKnown RBP13.96□□□□□ -0.18
RHBDL3-201ENST00000269051 SPAG1Q07617 926 aa13.96□□□□□ -0.18
RHBDL3-201ENST00000269051 HSP90AB3PQ58FF7 597 aa13.96□□□□□ -0.18
RHBDL3-201ENST00000269051 CCDC144CPQ8IYA2 1237 aa13.96□□□□□ -0.18
RHBDL3-201ENST00000269051 ZSWIM6Q9HCJ5 1215 aa13.96□□□□□ -0.18
RHBDL3-201ENST00000269051 RNF113AO15541 343 aaKnown RBP13.95□□□□□ -0.18
RHBDL3-201ENST00000269051 BMP15O95972 392 aa13.95□□□□□ -0.18
RHBDL3-201ENST00000269051 MAPK8IP2Q13387 824 aaPredicted RBP13.95□□□□□ -0.18
RHBDL3-201ENST00000269051 NAA16Q6N069 864 aaPredicted RBP13.95□□□□□ -0.18
RHBDL3-201ENST00000269051 EHBP1Q8NDI1 1231 aa13.95□□□□□ -0.18
RHBDL3-201ENST00000269051 ZBTB3Q9H5J0 574 aa13.95□□□□□ -0.18
RHBDL3-201ENST00000269051 DDX21Q9NR30 783 aaKnown RBP eCLIP13.95□□□□□ -0.18
RHBDL3-201ENST00000269051 HELLSQ9NRZ9 838 aa13.95□□□□□ -0.18
RHBDL3-201ENST00000269051 ABCF2Q9UG63 623 aa13.95□□□□□ -0.18
RHBDL3-201ENST00000269051 TUBBP07437 444 aa13.95□□□□□ -0.18
RHBDL3-201ENST00000269051 LDHAL6AQ6ZMR3 332 aa13.95□□□□□ -0.18
RHBDL3-201ENST00000269051 TAF4BQ92750 862 aa13.95□□□□□ -0.18
RHBDL3-201ENST00000269051 MCM6Q14566 821 aa13.94□□□□□ -0.18
RHBDL3-201ENST00000269051 MFSD6Q6ZSS7 791 aa13.94□□□□□ -0.18
RHBDL3-201ENST00000269051 ARHGEF10O15013 1369 aa13.94□□□□□ -0.18
RHBDL3-201ENST00000269051 TFCP2Q12800 502 aa13.94□□□□□ -0.18
RHBDL3-201ENST00000269051 CT47A1Q5JQC4 288 aaPredicted RBP13.94□□□□□ -0.18
RHBDL3-201ENST00000269051 UTP14AQ9BVJ6 771 aaKnown RBP13.94□□□□□ -0.18
RHBDL3-201ENST00000269051 CENPHQ9H3R5 247 aa13.94□□□□□ -0.18
RHBDL3-201ENST00000269051 SLC5A1P13866 664 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms